Detailed information of XP_029187171.2 in Acropora millepora

Genomic Location: NC_058071.1:8349715...8422782
NR annotation: XP_029187171.2, vacuolar protein sorting-associated protein 13D-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5THJ4Intermembrane lipid transfer protein VPS13D OS=Homo sapiens OX=9606 GN=VPS13D PE=1 SV=2
Q9VU08Intermembrane lipid transfer protein Vps13D OS=Drosophila melanogaster OX=7227 GN=Vps13D PE=1 SV=3
Q07878Intermembrane lipid transfer protein VPS13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS13 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR041969DomainIntermembrane lipid transfer protein VPS13D, UBA domainInterproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19527VPS13D; vacuolar protein sorting-associated protein 13D-Membrane traffickingko04131deepkoala

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