Detailed information of XP_029196069.1 in Acropora millepora

Genomic Location: NC_058072.1:23780923...23783180
NR annotation: XP_015752184.1, PREDICTED: exosome complex component RRP41-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NPD3Exosome complex component RRP41 OS=Homo sapiens OX=9606 GN=EXOSC4 PE=1 SV=3
Q921I9Exosome complex component RRP41 OS=Mus musculus OX=10090 GN=Exosc4 PE=1 SV=3
Q7YRA3Exosome complex component RRP41 OS=Bos taurus OX=9913 GN=EXOSC4 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR050080FamilyRibonuclease PHInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11953EXOSOME COMPLEX COMPONENTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0034475Biological ProcessU4 snRNA 3'-end processingInterproscan
GO:0071028Biological Processnuclear mRNA surveillanceInterproscan
GO:0071051Biological Processpoly(A)-dependent snoRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11600RRP41, EXOSC4, SKI6; exosome complex component RRP41-Messenger RNA biogenesisko03019deepkoala

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