Gene detail

Detailed information of XP_029197029.2 in Acropora millepora

Genomic Location: NC_058075.1:677534...693374
NR annotation: XP_029197029.2, cytosolic 10-formyltetrahydrofolate dehydrogenase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_029197029.2

ATGCTCAGAGCTTTTCGTTTTGTTCAGTTAGCTGCAGGTAAATCAACACGAAACATTAACACAACCAGAAATAGAATGGCTTCACTGAAAGTAGCGGTTATCGGTCAGTCACAGTTTGGCTTGGAAGTTTACAAGAGACTGCGCTCAAAAGGTCATGAAATTGTTGGGGTCTTCACCGTCCCTGATGTCAAAGGAAAACCGGACGTTTTAGCGACAGGAGCAGAGCAAGACGGCGTGAAAGTTTTCAAATTTTCTCGATGGAGGACGAAAGGGGAACCTATTCAAGAGGTTGTGGACAAATACAAAGCGTGTGGCGCAGAGCTCAATGTTTTGCCATTCTGCTCGCAATTTATACCTATGACTGTGATCGACCTTCCAAAACATGGTTCAATTATTTACCACCCTTCCTTGCTGCCAAGGCACAGAGGAGCATCGGCGATAAATTGGACTCTAATGGAAGGTGACAAACAAGGAGGCTTTAGTGTGTTTTGGGCCGATGATGGTCTGGATACAGGTCCGATTCTTCTTCAAAAGAGCATCGACATTGACCCAAATGACACAGTTGACACGCTATATAATCGATTCCTGTATCCTGAGGGAATCAAGGGCATGGTTGAAGCTGTTGATTTAATTAGCAATGGAAAGGCACCAAAAATTCCGCAACCAGAAGAAGGAGCAACCTATGATAAAATCTGGAAAAAGAAAGAGGTGGCCAAGATTAATTTCAACCAATCAGCAGAGATGCTTCATAACTTTATACGGGGAAATGATAAGCTTCCAGGAGCTTGGACCATGATTGATGGACAGCAAGTGACCCTTTATGGCTCCTCACTAAGCCCCAGTGATACACCTCCTGAGGGTACTCCCGTGACAATAGAAGGCCTAGAAAAGCCTGCCGTGGTTCATAAGGATGGAATGACTGTGACTGGAAATGATGGCAAGATGTTAACAGTGAAGACTTTGCAACTTGGAGATGGTCGTATGATCCAGGCAGCGAAGTTTGGTCAAATGGAGGAAGCCGCTGAGGCAATTGAACTTACTGAGGAAGAGAAAAACATGGAAGCAAGGCTCAGGGAAATATGGGCTGGGATTTTGTCAAATCCTGATATCCTTGAAGACACAGATTTCTTCAAGGCTGGTGCTGGGTCCATGGATGTCGCAAGGCTTGTGGAAGAGGTGAAGGAAGCTTTTTCAATTGTGTTGGAAGCTGAGGAAATTTACATGAATACCAGGTATAGAGATTTTGTTCGCCTTTCTGTCTTGAGATCTCGTGGTGGTGGACAGGAAGAATTCAGTTGTAACACTATGGACATGGATGTGAACAACATGACAGTGCACATGCCCAACCAGTTGTTTATTAATGGGGAATTTGTGGACTCTTCCAATGGACGAACATTTGACTGCATAAATCCAGCAAATGGCTCGGTTATCACACAAGTTGCCCTTGCATCAACCGAGGACGTGGATGCTGCTGTTGCAGCTGCAAAGGAAGCTTTCTACAATGGACCTTGGGGAACAATGAATGCCAGAGACCGTGGACACCTCATGTACAAGCTTGCTGAGCTTATGGATGAGCACAAAGAAGAACTGGCCACAATAGAATCCCTTGATTCTGGGGCAGTATACACCCTTGCACTCAAGACTCATGTAGGCATGTCAATCGACACCGTGCGTTACTTTGCAGGATGGGCTGACAAAATTCAAGGATTGACCATTCCTATAAATAATGCAAAACCAAACAGGAATTTGTCCTACACAAAGCGTGTGCCTATTGGTGTTTGTGGTTTGATTGTACCTTGGAACTATCCACTGATGATGTTAGCTTGGAAGATTTCTCCTCTGTTAGCAGCTGGTAACACCGTAGTCCTCAAACCAGCCCAGGTGACCCCACTTACAGCACTCAAGTTCGCAGAGCTGTCAGCCAAGGCAGGATTTCCAAAAGGTGTTATCAACATTTTACCAGGATCAGGATCTGTTGTGGGGAATCACATTTGTTCTCATCCTGACATAAGGAAACTTGGTTTCACTGGATCAACGCAAACAGGAAAGTCAATAATGGAAAGCTGTGCCATCAGTAACTTGAAGAAGTGTTCCTTGGAGCTTGGTGGCAAATCACCTTTGATTATTTTCCATGATTGTGATATGGACAGGGCTGTTAGACAGGGAATGATGGCTTGCATGTTCAACAAAGGAGAAAACTGCATAGCTGCTGGTCGGCTGTTTGTTGAGGCATCCATCCATGATGAATTTGTGTACAGAGTGGTTGAGGAAATAAAGAAGTTGAAAATTGGAGATCCACTTGACCGCTCGACAGATCATGGACCACAGAATCATAAGGCCCACCTTGATTCCCTTTTGGAGTATGTCAACAAAGGAGTGGCTGAAGGTGCCAAGTTGGTGTATGGTGGCAAGCAACTGGAAAGACCAGGTTACTTCTTTGAGCCAACTGTATTCACTGAAGTGCAAGATGGAACGTTTTTGGCAGCAGAAGAGTCATTTGGTCCCATTATGATAATCTCCAAATTTGAAGACGGGGATATTGAGGGTGTTTTGAAGAGTGCTAATGGCACCGAATATGGGCTGGCATCTGGTGTTTTTACAAAGGATTTAAGCAAGGCTCTCCGTGTTGCTGACAGTTTGGATGCAGGCACTTGCTTTGTGAACACTTACAATAAGACAGATGTGGCTGCTCCTTTTGGAGGCTTCAAACAGTCTGGCTTTGGCAAAGATCTTGGGGAAGAGGCTCTGAATGAATATCTGAAGACAAAAGTCGTCACTGTTGAATATTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q6GNL7	Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis OX=8355 GN=aldh1l1 PE=2 SV=1
Q63ZT8	Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis OX=8364 GN=aldh1l1 PE=2 SV=1
Q3SY69	Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens OX=9606 GN=ALDH1L2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02911	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF00551	Formyl_trans_N	Formyl transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011034	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan
IPR011407	Family	10-formyltetrahydrofolate dehydrogenase	Interproscan
IPR036477	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR005793	Domain	Formyl transferase, C-terminal	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR037022	Homologous_superfamily	Formyl transferase, C-terminal domain superfamily	Interproscan
IPR001555	Active_site	Phosphoribosylglycinamide formyltransferase, active site	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR002376	Domain	Formyl transferase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR029510	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11699	ALDEHYDE DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006730	Biological Process	one-carbon metabolic process	Interproscan
GO:0009258	Biological Process	10-formyltetrahydrofolate catabolic process	Interproscan
GO:0016155	Molecular Function	formyltetrahydrofolate dehydrogenase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0004029	Molecular Function	aldehyde dehydrogenase (NAD+) activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00289	ALDH1L; formyltetrahydrofolate dehydrogenase	EC:1.5.1.6	One carbon pool by folate	ko00670	deepkoala