Gene detail

Detailed information of XP_029199859.2 in Acropora millepora

Genomic Location: NC_058077.1:648312...673867
NR annotation: XP_029199859.2, lutropin-choriogonadotropic hormone receptor-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_029199859.2

ATGGCGGCGTTGTGGAGGTTGGTGGCAATTTTCCTGGTAGTTTTAAACAGTACCGAGCAGAGCCAATGCTCGTTTCTTACAAGGCGTAGCGAGCACAATTGTGGGCCTTGTTTGTGTTCCCGCTCTATTGAAGGCCGCGATATTGACTATAATGCTGACTGTGTTAGTCGAAACTTATCGACTGTACCTGCTGAAATTCCTGACAACATTACTGTCTTAGATTTGAGTGACAACTGGATAACAGATCTTTCGAAGTTAACATTCGCTAACTTTACCAAACTACGAAAACTATATCTGAAAGAGAATAAACTTAGAACTTGTCCAGAGTTCGTGAGCGACACATTAAATGAATTATATTTGACAGGAAACAAAATGAACAATATTCCCCATGGTGCTTTTGAGAAAGTTCTCGGCGTTAAACATCTTTGGCTCGATGACAATGACTTAAGAGACGTTCCGAAGGAAGCCTTGAAGAACCTTCAAAAGCTAGAATACTTGAATCTGGATCAGAATGAGATTCGTAATATTGGACGCGATTCCTTCAACTCACTTTCTAGGCTAAAGACCTTAATGTTGTTCGAGAACAAAGTAAAAGAAATCGATAATGATGGATTTAAAGGCCTGGATTCCCTAGAATCATTAAATTTAAGAGGCAACAATTTGAGCGATGTGCCAGTTTCGGCCATAAAACATTTCAAGAATCTCCGGTCCTTGGAACTTGATCAAAATCCAATCACGAAAATACCAGATTATGCCTTTAGAGGACTGGACAAACTACGTCACATAGTTTTGACCTGGGAGAAAGTGAAGAAGATTGGTGGTAAGGCATTTGCCTATCTGCCATCTCTAGAGCGATTATCGTTGGTCAATGTTAAGTTGGATGGTTTTCCAAACTTGACGGGGACATCTTCTCTTCAGTACTTAACTTTAACGTTCAATGATATAAAGGAATTACCAGAGAATCTCTGCCAGAAGCAAACGAGTTTGCTGGACTTAACGCTGAATTTCAACAATATTGCCCGCATACCTGACCTGTCGGGATGTTCATCACTTTCTGTGTTAAAAATTGAACACAATCAGATCGAGTCAATCGGGAGCTCATTGAGAAATCTGGGAAAGCTACAAGACTTAACATTGAAAGGAAATAACATACGGAGTCTGGAGAGCAGAACATTTGAAGGGGTTACCCAGCTGCAAACATTGAATCTTGCAGACAATAAAATAAACTTCATCGCTAATGATGCTTTCGCACCTTTCAAAATGATCAAAGTTCTAGATCTCAGCTACAGTAGTTTCTCTGTGCTTCCGACCAATGGACTGAAAAGCTTGGAGACTTTGAATGTGCGATACAATAGAGAACTAACCGAGATACCAAGCGTAAAAGATCTGCCTAAGATCCGACACGTGGAAGCCTATTATCCGTATCATTGCTGTCAGTTTAGGAAGGAGTCAAAAAGCACAAAAAAACCAAGAGAAGAGATTCCAGTTACAAACAAAGCGTCAGACTGGGTATGGGAATTCAAATGGCTACGAAACGATTACAATGACAACAACTCGACCTTTGCTTTGGGTGATGATCTGTCGGGCTTCGGGTCGGGCGAGGTCGACCCGATCCTGGCCAGGGACGAGGGAAGCTCGGAAGACAATATAAGAGCAGCGAAGGCAGGTAGTTCAGATGATCCTCCTGATGTGATTTTAATTGAAGGAGAAGAAACACATGAAGTAAAATGTATCCCTGAACCTGCAGACCCATTCTTCCCTTGCGACGACCTCATGGATTCAACCTTCCTTCGAGTGGGAGTCTGGATCGTATTCTTGCTTGCGTTGTTTGGCAACGCCACAGTCATTTTCGTTATCATGGCGCGAAGCTCTCGAATTGACGTATCACGATTTCTAATCTGCAATTTAGCAGTGGCAGATTTGTGTATGGGTATTTATCTTGGTCTCTTAGCCATTGTGGATGCTTCTACCCGAGGAAACTTTCGAAGTTATGGTGTTAAGTGGCAGTTGAGCAGCGGTTGCAAGACAGCGGGATTTCTTGCCGTGTTGTCCAGTGAGACATCTGTGTTTACTCTAACAGTTATCACTGTGGAAAGATACATTGCGATAACTCATGCGCTGGACATCACCAAGAAAATGAGCTTGAAAAAAACCGCTGTAGTGATGTTCATAGGTTGGTGTTTTGCTTTAATCGCTGCTACGTTGCCGTTATTTGACGTGAGTGACTACACAAAGTTTAGCGTATGTCTTCCGTTTGAGACTGGGGATCCCAAATCTCTTGCTTATGTGACGTCAGTTCTGACTCTCAACGGTACGGCCTTCCTCGTTATACTTACTTGTTACATAAAAATTTACTGTGCAATCCGTGGTTCCAGTGCTTGGAATACCAATGACTTCAGAACTGCACAGCGCATGGCGCTTCTTGTATTTACCGACTTCACGTGCTGGGCGCCGATAACTTTCCTTTCTCTCGCTGCAGCGTTTGGAGGAGACTATGTTAGCCTCAAAGAGGCTAAAATTTTTACAGTATTCGTGTTTCCGTTGAACAGTTGTGCGAACCCATTCTTGTACGCAATACTTACGGGACAGTTTAAAAGAGACTGCATATCGCTGTGCAGAAAGGTTAAAACTTCGCAGATTCCCAAAATAACAAGTTCAAAAAGAAAATATTCCATCTCAAGTGCTGAAATGAGACGAAATTCACAAGTAAGTTCGTCCAATGGACTCGAAGGCATGGTAGCGAGACTTCGCGGACGAGAGGTGAGGCGAAATTCTCTACCTCCGTCAATGAGGTTCATGGTGCAAGGAAACAAGTCACTGCAGGATAAAGACGAACGAGAGGTTGTCATTGAGAGGGTAACTGCTTTATAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q28005	Lutropin-choriogonadotropic hormone receptor OS=Bos taurus OX=9913 GN=LHCGR PE=2 SV=1
Q5GJ04	Follicle-stimulating hormone receptor OS=Felis catus OX=9685 GN=FSHR PE=2 SV=1
P23945	Follicle-stimulating hormone receptor OS=Homo sapiens OX=9606 GN=FSHR PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF12799	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR002131	Family	Glycoprotein hormone receptor family	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR025875	Repeat	Leucine rich repeat 4	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016500	Molecular Function	protein-hormone receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755	Biological Process	hormone-mediated signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08399	LGR6; leucine-rich repeat-containing G protein-coupled receptor 6	-	G protein-coupled receptors	ko04030	deepkoala