Detailed information of XP_029207157.1 in Acropora millepora

Genomic Location: NC_058074.1:1143924...1149916
NR annotation: XP_029207157.1, exosome complex component MTR3-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P0I8Exosome complex component MTR3 OS=Danio rerio OX=7955 GN=exosc6 PE=2 SV=2
Q28F19Exosome complex component MTR3 OS=Xenopus tropicalis OX=8364 GN=exosc6 PE=2 SV=1
Q8BTW3Exosome complex component MTR3 OS=Mus musculus OX=10090 GN=Exosc6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR050080FamilyRibonuclease PHInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11953EXOSOME COMPLEX COMPONENTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0034475Biological ProcessU4 snRNA 3'-end processingInterproscan
GO:0071028Biological Processnuclear mRNA surveillanceInterproscan
GO:0071051Biological Processpoly(A)-dependent snoRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12587MTR3, EXOSC6; exosome complex component MTR3-Messenger RNA biogenesisko03019deepkoala

TOP