Gene detail

Detailed information of XP_029208675.2 in Acropora millepora

Genomic Location: NC_058071.1:12812610...12828280
NR annotation: XP_029208675.2, U3 small nucleolar RNA-associated protein 14 homolog A-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_029208675.2

ATGGCGACCTCGATTGCCCTGAAGATTGCACCTGTGGTGAACAGCGGTGATAATGTTGAACCCGAAAATTACCTTGAAAGCGCCAGCGAAGACGAGGACAGTGAAGATGAGAAAAAACATGAAAAACTCCTTAAGGATATCTCCTCTTTGGGATCTGTCACTAAGAAAAGACATTTGCCTGAAAGATCAGAACCAAGCAGGAAAGTGTCAGAATTTCATTTAAGTGCTGTGAAAGAGAATGAGGAGCAAGTTGGGTTGAGTGATCTTATTGGGTCATTAAGTAATACCGATGAAAATAGAATTCTCAAGAGAAAGTTGGATGGCATGCAGAAACATTCAGACACACTTGATGTCCCTTTGCCAACACCTGAAAGTCAGAAGATTCAGCGTATCATTGCTTTTGGACAAGCTAAAAGAGATGTGTGCAAGTGGGGACCAATTGTAAAGAAAAACAGAGAGGCTGAACATCTTTCATTCCCCCTGCAACAATACACGCCCCCTGTGCCAACTCTCAAAAGACTTGGAGTCAATTTCAAGCCCCGTACTCCATTAGAGGAGGAAGTTGCTGCAGTGCTCAGTGGGAGTTCGCATGTTTTAGAACGTGACGATAAAGAGCTTACTGCAGATGAAGAGAAAGCTTTGCAGGCCATGGATTTGGAAGAGGCAAAGGAACGAAGAAAGGAGCTTCAGAAGTTCAGAGTGTTGCAGTCTTATTATGAAGCCAAATGCCGAAGGATAAAGAGAATCAAAAGCAAGAACTATCGTCGGGTGAGAAGAAGAGCTGAAATGCGCGCAGGTGCAAAGTTGATTGCAGAGGGTGAGGATGTTGGCGATGATGAAGAAGCCGATAAAGTACTGGAAAAAGCTGAAAGAATGAGAATTCAGGAACGCGCTACACTGAAGCACAGGAACATGTCAAAATGGTCCAGATATTTGATAAACAAGGCAAAAGACAGCTCTCAGGCCAAAAAATTGCTTCAGGAGGAGCTTCGTTTCAGCCGCAAACTGACAGAGAAGAGAAAACCATTGCCATCAGAAACAGAAAGCGATGAAGAGATTTCGAAGACTCCAGCAGGTGCAACTGAAGAACGAGAAGGTGGCAAAGATGATGCACCTGATAAATATGGCGGTCTCTTAACCTCGAAAGATAACCCATGGAGACTGGAAACTGCAGGCTCCAGGCTGCAGCCGGAAGCTGCATCATCTGGCGTGGAGCATGATTCTACAGCGAGGCTTCACAGACTTAAAGAAGTCAAAAGTGAGGTAGCCAACGATAATGAGGACGACGATTCTGGAGATGATAGCGAAGAAATGCAGAGCGAGGATGAATTTGAAGTGGAAATGATAACACCAACAGAAAAAGGAAGGAAAAAGTCCGGCAAAGAGGACGGTGCTGTGGGTACAAAGCGAAAATCTGACATCAAAACAAGAAAAGCAGGTGAGAAGGTAAAGAAGAGGAAGAAAGTCAAGAAAATTGATAAAATCAATGGGCTTGCTAAAGAGAGCGTCGACGATGAGGGTGGTGGTTGTCAGACTTCCGCTGGAGAGGAAGTTGCTCTGCTTAAAAGGAAGAGAAACACAGTGGAAAAGAAAAACTTGAGAGAGAAATCGAAGGATCAAAGGAATAAAAAATTGGTTGAAAAGAATATTTCAGCTAGGGGCGCAATGGATAAAGCTTTTGGAAAGAGTAACTTGAACCAAAACGGAAACGCAAATAGCTGTTATGGAGAAGGGAAGGTAGAGAGTTCGAAAACTGTGAGAAGTGCAACCAACGACATTCGCGTAGATCCAAAGAAAATATTTCGAATTGAAGATCACGGAAACGCAGCAGATGAGATTGAAGGTGATTCCCTCCAACAGAGGCGCATAGATATTCAGCGGGCGTTCGCGAATGACGATGTTGTGGAGGAATTTGTGAAAAACAAGTATGATGCTGAGAAAGCGCACCAATCAGAGGATATTGATATGACTCTCCCAGGCTGGGGTTCCTGGGCGGGAGCGGGTATTGCGCCTTCGAAGGGGAAAAAGAAGTTTATCAAGAAAGCAGACCCTGCCCCACCCCGAAAGGACAGAGATTTGGCTCATGTCATTATCAACGAGGACAAAAGCAAGTTGCTTGCCCAAAACCAGGTTACAGAGGTTCCATATCCATACACCCATCACGTGCAATTTGAACGGAGCATACGCAATCCCGTGGGAAAACACTGGAATACGAGCACTGCCGTCGAGCAACTCACCAAACCTCGTGTGTCCTCCATGATTGGAACGATTATAGATCCCATTAAAGCCCCAAAAGAAATCAAAAATAAAAAGGTCGAAGACAAAAGAGAGAAGAGGAAGAAGCAAGGAACGGAGTCGTCTGGAATTAAAATTCACAACTGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q640M1	U3 small nucleolar RNA-associated protein 14 homolog A OS=Mus musculus OX=10090 GN=Utp14a PE=1 SV=1
Q6EJB6	U3 small nucleolar RNA-associated protein 14 homolog B OS=Mus musculus OX=10090 GN=Utp14b PE=1 SV=2
Q9BVJ6	U3 small nucleolar RNA-associated protein 14 homolog A OS=Homo sapiens OX=9606 GN=UTP14A PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04615	Utp14	Utp14 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006709	Family	Small-subunit processome, Utp14	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14150	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14567	UTP14; U3 small nucleolar RNA-associated protein 14	-	Ribosome biogenesis	ko03009	deepkoala