Gene detail

Detailed information of XP_029213111.2 in Acropora millepora

Genomic Location: NC_058070.1:11584370...11603846
NR annotation: XP_029213111.2, plasma membrane calcium-transporting ATPase 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_029213111.2

ATGGCTGATGAGGTAGATGCAAAGTTCATTCCTGATTTCACTAATACCACAAAGGAAAGGCTGGTAGATCTCATGAGTGGTAATGGAAGCTTGGAAGCTACAGTAGGGAAGTTTGGAAGCGTGAACAACATCATTCATGACCTTCGCACCTCATCCACCAAAGGAGTGATTGGGATTGGTGAGGCTGTTCATCATAGGCAGGAAAAATTTGGCAGCAACTTGATTCCTCTGCGGCCACCGAAAAATATTTTGAACTATCTTCTGTGTGCCTTGAAAGACTGGGTCATTTTGGTGCTGTTTATTGGTGGGTTGGTTTCATTTATTTTGGGTGCAGTTTTCCCTGAGAAGTGTGAAGGTCATTACAAATTAGTTGTTGCAATGTATGAGGGAATTGGCATAATGGGTACTGTGGTGGTCATGATTTTGTTGACAGCTTTCAGTGATTATTTGAAAGAAACTGACTTCAGAAGATTGCACGGAAGAATCAACAGAGAGCGCAGAACAAATGTCATAAGAAATGGGAAAATGACAGAGATCGTTGCACAAGATATAGTGGTTGGAGACCTTTGCCAACTCAGCGTTGGTACTCTAATCCCTGCGGATGGAATCGTTGTGCAGCAAAATGGCCTTGTTGTGAATGAATCTGCTTTAACACGGCATAAAGCAATGGCCCCTAAGGAAATGCACTCGCTAGTGTATGCTGGCACTCATGTTGTGGATGGATGTGGTAAGATGATAGTGCTGGCTGTGGGACTTAACACACAGTTGCATATAAAGAGGCAGCAATCTGTAACCACCCCCACACTCATTCCATTCAAGCCCGCTTTTCCTGAACAACCAGAGTACCCTGATGAAGGCACCATCTCATTCGAACACAAGGAAGACTCAGCTTTGTTGCAAGGGAAGATTAACAAGGTTCAAGTTGCGCTTGGACGCATTGGCATTGTCCTTGCAGTGGTTGCAATCCTTGTGATTATCATCCGCTTCAGTGTCTACACTTTTTCAACGCTTGGATTAGCCTTTGACCCAAGCCACTTCACTGAATACATCAGAGCAATAATAGTTGGTGTCGTTGTTCTTATCATTGTTGTCCCGGAAGCACTGTCATTGGTGGTATCAACATCATTAGCTTTCTGTGTGAGGAAGATGTACCATGATCAGGCTTTGGTGCGACATGTTGATATGTTAGAAACAATGGGCAACATAACAAATCTGTGCTGTAACAAGACAGGTGTCCTGACCCAGAATCGCAGAGTGGTATCAAAGAGTTATCTTGGTGAAAAGGAATATCAAGGAGAACCACAACAGTATAAGGATGACATCCCAAAAACATTATTCACAGAACTATGCAAGGCCATCTCTGTGAACACCAGTTATTTGGCTCAAATCTTGGAAGAAGGTGCTGACAACATTCCAAAACAGGGTGGAAACAGGATAGATGCTGCTCTGTTGCAGTATCTGTTTGAGTTAGGAGAATATTATCAGACCTGGAGGGATTATTACCCTGAAGACAGACTCATCAAAGTTTTTGAATTCACTTCTTGTGACAAATGCAGGACAACAATCATTGATGATGGGCAGGAAGGATTTTATAAGGTTTATTCCAAGGGAGCTACAGAGGTGTTATTGGGATTGTGCACTTCAGTTGTGGCAGGGTCAGGAGAGCCAAGAAGATTTACAAAAGATGATGCTGAAAAATTGTTACAGGATCTGATTAAGCCTTGGGAGAGTCAAGGACTCCGTTTGTTATGCCTGACCACAAAGGTTATCCCATCTACTGATTATAAATCAGAAATGACAGAGAAAGATCTCCTAACAGACTTGACATTGCAAGGAATAGTTGGCATAGAGGATCCAGTCAGAGATCAAGTACCAGATGCAGTACGCAAGTGTCAGAAGGCTGGTATCACTGTACGTATGGTGACTGGTGATAATGTCATCACTGCGCGGTCTGTGGCAATCAAGTGTGGCATTATTACACCAAATGATGAAAGCCTTGTCTATGATGGGGAGGAGTTCAATTCATATATCAGAGATCCTGACACAAAGATTAACGAAGAACGTTTCAATTCCATGTGGCCCAAACTGTGTGTCCTTGCGCGAGCCAAACCGTCAGATAAGTTTACCTTAGTGAAGGGTATGATGCAGAGTCACATTAAACCTGCTGGAGAGATTGTGGCTGTGACAGGCTCAGGTGCTAATGATGGGCCAGTGTTGAGAATGGCTGATGTTGGATTCACTATGGGAGTGGCAGGAACAGCTATCTCTAAGGAAGCTTCCGATGTCATCCTTTTGAATGATGATTTCAACAGCATTGTTAATGCCATTAAGTGGGGTCGGCATATTTACTACACTGTCCTCAAGTTCTTGCAGTTTCAGTTTACAGTGTCCTGGGTTGCTGTTATTGTTGTGATCGTTGGAGCTTGCCTTGTAGGGAAGAGTCCTCTTGTGGCCACCCAGCTGTTGTGGATCAATCTTATAATGGACACCCTGGCTTGCTTTGCTTTAACAAGAGACATCCCAACAGACGATCTGCTCAATTACAAGCCATATGGCCGCCACAAGCCTCTGATCTCACGCACCTTGCTCCGCAACGTGATTGGTCACAGTATTTACCAACTGGTTGTCTTATTTGTGTTGATCTTGAAAGGAAGCGACCTGTTTGATATTGCCGATGGATTCCGTTCTGCCATGTCATGTAAGCCAGGCCAACATTCCTCCGTGGTATTCACCACGTTTGTGTTCATGCAGCTGTTCAATGAGATCAATGCGAGAATGCTCCAGGAAAGAAATGTGTTCACTGGAATCCACAAAAACTATGGTTTCTTGATCATATGGGTTGCTCAAGCTGCCATGCAGATCATCATGGTACAGTTTTTTAACACAGCATTCCATGTGACAGGAATGGACTGGGATCAATGGATGTGGTGTTTATTCTTTGGCTTCTCAGAGCTTCTGTGGGCTCAATTGATCTTCACCATTCCAAAAGATGTCCTACCTGCGTGGATGCGCTGTGCGGCTGATGGTGCTCCACAAGGTCGTGGTATTGCTTACATGAGGAGCTGTTCAAGAATGGAGCAGACGGACAGTGGAATAAAATCATCCATGCTGAGTCCACTGACTGATTTGCCATCAGAGCCACAATTTCCAGTCCCTGAAGTTCGAGAAGAGAGGCTTCCACTTAGCGTAGAGTATAGTAACTTTTAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q9R0K7	Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=2
Q98SH2	Plasma membrane calcium-transporting ATPase 1 OS=Gallus gallus OX=9031 GN=ATP2B1 PE=2 SV=2
D3K0R6	Plasma membrane calcium-transporting ATPase 4 OS=Bos taurus OX=9913 GN=ATP2B4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13246	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF00689	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan
PF00690	Cation_ATPase_N	Cation transporter/ATPase, N-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR001757	Family	P-type ATPase	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR006068	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR004014	Domain	Cation-transporting P-type ATPase, N-terminal	Interproscan
IPR006408	Family	P-type ATPase, subfamily IIB	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24093	CATION TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005388	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051480	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan
GO:0070588	Biological Process	calcium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05850	ATP2B; P-type Ca2+ transporter type 2B	EC:7.2.2.10	Endocrine and other factor-regulated calcium reabsorption	ko04961	deepkoala