Gene detail

Detailed information of XP_031549408.1 in Actinia tenebrosa

Genomic Location: NW_022258348.1:26785...29190
NR annotation: XP_031549408.1, tetratricopeptide repeat protein 28-like, partial [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031549408.1

ATGGCAACAGGAGACAAAAAYGAGGTGAGCTTTTTCTACAAAAAAATAGGAAGTCTCTATGAGAAAACCCACMAGTTCCAGSAAGCTATATCTTGCCATGAAAAATTCCTAGAAGTTGTATCAGAACCGAATTCCAAAAAGGAGGAACTAAGTGCTATTGCAAAGTTAGGCATTTTACATTTTTATCTAGGGCAATACCTCAAGTCAGTGGRATACTCCCAAAAAGCTGTTGAAATTGCTAAAGACTTAGTTGAGAGGAAAGAAGAAGGAGACGCTTATGGAAACCTAGGAAACGCTTACCAGAAGTTAGGCAAGTACGAAGAAGCAGTCCAGTGTTTTGAAAAGTACTTGGGGTTTGCAAAGGAAGTAGGTAAGAAGGAAGTARAAAGAATAATATACTGGAACTTAGGATGTGCATTCAAAAAGCTATCAAAGCACCAAGATGCCATTGCCAATCTTGAAGAATTCCTCAAGATGTCTATTAGTATGGGTGACAAGAAAGGAGAGATGATGGCATATGGTAACTTAGCAAACCCTTACGAAAAGTTAGGCAAATATGATAAGCTGATYGAAGTYTCAGAAAAAAGTTTAAAGATTGCACAAGCAATAAAARACAAAGAGGGAGAAGCAGTGGCTTGTCTGCATTTGGGAGTTGCCTACCARACATTAGGGGAGCTCCATAAAGCCACCRAATTTCATGAAAAGAGTTTAAAGTTTGCCCAAGAAATTGGTGACAAGAAGATCGAGAGCCATGCCCATACAAACTTGGGGAACACCAATCGAATGTTAAGAGAGCAAAACAAGGCCACCACGCATTATGAGGAAAGCATGAGGCTTAGCAGAGAGTTGAAAGATAGAGAAGGAGAGAKTGATTCCTTTTTGAATCTAGGAGTTCTCTACGCAGGGTCAGGGAGGTACCAAGAAGCCATGACATGTTACCAAAAGAGCCTTGATATCTCTATGGAAACAGGAAGCAAGCATGGAGAAGGGACAGCCTATGTGAACATGGGAAGTGTTTGCTCAACATYAGGCAAGTACCATGAGGCATATGTTTACTTTGAAAAAGCTCTTGCTGTCTTCAAAGATGTAGGATACAGSAAACGAGAGGGGGAAGTGYACAGAATCCTTGGGAATTTTTACGCAAATTTAGGAATGTACAAGAAATCTCTCGAAAATCACCAAAGCAGTTTCGATATTGCTAAAGAGACTGGAGATAAAATGGGTCGAGAAAGTGCTTTGGGCAACATGGCGTCTGCCCATCAGAAACTAAATAACTTCTCCGAGGCCTTGGAGAAGTACGAAGAGTGTCTGGAGATTGCTCAAAATGTCGGTGATAAGATCGGAGAAGGAAGGACATTTGCTAACATTGGGAGTCTTCACCAGTCRCAATGTGAATATGACAAGGCCCTTGACTTCTATAYGAAGAGTCTTAAAATTGCCCWAGAAATTGGTGACAAAAAATCCCTTGCAAATGCATATGGAAACCTAGGAGGCCTTTTTGTTTTGTTGGAAAAATACGACGAAGCAATTGAATCTGGTGAAAGGAGCTTGCGCATTGTTGAAGACACAGGAGAGAGAAGGATCGAAGGAAAGGCTTACAATAACCTTGGTTCAGCTTACCACCACATAAGTAGCGATACGAATAAAGATGCAAACACCCGTCAACAAGCAAAAGAAAAGGAGATCTTCTACTTGCAAGAGGCTTTGAAGATCTGGGAATGGTTGTACGGCCATCTAGGGGACAAGGATGAATTCAAGATATCCATCGTTGATACGTATATCATCACCTACAAAATGCTTACAGCAGTGCTGATTGAAAACCAGGAAATAGAAGAAGCTCTTCTGGTTTGTGATAGAGGAAGAGCTCGTGCCCTAGGTGATCTTTTGTACTCCAAGTACAGTATGAACAATGAAGATGGCTCTGAGAACGCATCCCACCTGGAAAAGACGGACATAGAAAACGTTTGCTCTGCAAATGTTTCCATTGTGTCATTTTCTTTCAATAAGGGCATTGTAGCATGGGTCTTAGAGCAGCAAAAGGCGTTACATTTCACTGAATGTGATAGTAAAATGTTGATTACTCATGCTGAAGGTAATATCTCGCAAAAGAGTGGAAAAATCGAGGACAAAGATCTTCAGAAGATTCTATACCAGATTATCAACAGAGCGTATGAGAGGATGGAAATCGATGAGGAAGAGGAAGACAAATCTATGGAATCACTCAGTGGCAATACCAACAACTTGAATGTTAATAGTGCTGTTAAGGAATCGTTGCCTGGGCCTTCAGATAAAGAG

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF12862	ANAPC5	Anaphase-promoting complex subunit 5	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052699	Family	Regulatory & Mitotic Spindle Associated	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR026000	Domain	Anaphase-promoting complex subunit 5 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10098	RAPSYN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala