Gene detail

Detailed information of XP_031551353.1 in Actinia tenebrosa

Genomic Location: NW_022258598.1:18459...26425
NR annotation: XP_031551353.1, protein zyg-11 homolog B-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031551353.1

ATGACGAGCACTTTTACAACGGAGTCATGGAATACCTTGTCTCCTTTGACACTAGAAGATATTTGTCTGGATTTTATCTGTAAAAACATCGAAAATTTAACGTTTGAAGTACAAGAACCTGTTGGGAACTTCAACAAGTTGGCTTTCAAGGTCCCTGTGTTTTTACATGAACGACTAGCTGAAGCAATTGTCAGACAGTTRGCAAGCACCAACAGACTGACTTTGAAGGTTTTGACACTATTTTTAGACAAAACGACTTGCAGATTGAAAAGGGCTTGTATTCAGGACTCAAATATCCGAGAAATTGGTCTCAGGCTACTGTTGATGCATCATACAATCACTGATTTAGATTTAAGGCGGACCGAAATCACCTTTTCTCTAAATGTCATAAGCTCTCTTGAAGGATATGAATGTACTTCCTTTTTGAAGAGACTAAACATCAGCAGCGCAAAGAATGGGTTAGAATCCTCTGCTGTCTGCTCATTCAAGAATTTAATATTCCTAGACATCAGTAAAAACAGCATCACTGATGCTGACTTAAAGGTGATTTGTGATTCCTTGAAAAAGTTGGAAGAGCTTAATATTTCCTGTAATCCAATTTGTGAAGTTGAATCATTTGGTACAGCAAGGCAAAGACTGAAATCTCTGAAGGCATATAATTGCCCTGTTGCATGGAATAACCCTATAGATTTTGCCCAGTTTAAGAATTTAAGGCATCTGGACATTTCCAGGAAACCGACACGCCATATGTTACCCGGAGATGATGCAGAGAAGCTTGAGATGTTGCTTAGCCAGAGGGATGCTCTAAAGGACCTTGAGGTGCTAGATATTTCAGGGACACAGAGAGTGATGGATAGGCCACTAGAGGTGTTTCTCAGTGGTCATCCAAAACTGACCTTCCTTGGGCTTTGTAAAACTGGGTCTTCATATGCCGACTTCTTACCCAAAGATATAGAGATAACAGGGGAAGCAACAGAACAGCAGATTCTATCTTCATTACAAAACTACCCTGACCGAGCATCCTACATGACTGAAAGCCTTAGTAGGCTTTTCCACATCAGCAAAAACTGGACAGAGCAAAGATTTGAAATTTTACAGTATGTTTTGCCTCCGATGGAGATGCACCCACAGGATCTGAGAATGCAGATGGCATCAACGGCATGTATATTTAATTTGACAAGGAGTGCAAAAAACCAATATGATCTTCACCCAACTATACTAGGGAAGATTGCCAGTCTTGTACTTAAAGCAATGTCAAGCTTCACTAACAAACATGAGCTTATAAGAAATTGCCTACTGATACTGGATTCACCACTCATGCTAAGATATGCCAAATTTGATTACTATGAAGCCTGTATGTCGGCCATGGATGCCCTATGCCAGTTCATCAACGATCTGAACATTGTGAGGCTGGCGACAAAGATCTGTGCAGTACTCACTGCTAAGATATCTAATTATGAGACTATAGCTTTAGGTACGGACAGACATTTCAAGACACTTCTCAATATTGTCAAAGACAAGGTCGAATCCCAAAGATCTGACTACGTTCTCAGTCTGACGCTGAGCGTCCTGTGGAATCTCACTGATGACGCCCAATGCACATGTCAGCTATTTGTTGATGGCCAGGGATTGAAGTTATTCATTCAAGTGTTAAAGGAATTCGGGACAGAAAATGTTATCGTGAAAAAAGTCCTTGGGACCCTGAATAATGTAGCCGAGGTAGACTTTCTTCGTCCTCATCTGTTGACAGACGAATGTGTAGGCTTATTAAGTGATTTATTGGACAGAACTGAGATACAAGTGTGCTACTTTGCGGGTGGAATATTGTCAAATATCGCGCTGGCCTGGGAACCACACCTGTCAGTGACTCCTAATAAATCCCAGATTATTAGGAAGATGGAAAAGGCAGTACTCAGCTGGGAGACCCCAACAGAAGAAATGGTCGCCTACAGATCGTTTACACCGTTCGTACCTTTGCTCAAATCCAATATTACAGCTATACGGCTATGGGCTACCTGGGGCATCCACCATGTCTGCACTAAGAACCCTGCTCGCTACATCCCGCTGCTCATATCTGACGGGATCAAAGAAATCATAACGAAAATATCCCAAGATGACAACGAAGACGTACGTCTTAAGAGTTTCTGTCAAAAGGTGTGTGAACAGGCAAAAAAGTTGTACCTTAAAGATGTTGTGAAAGACGACACACCAACACCTATGGAGCTTTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q9C0D3	Protein zyg-11 homolog B OS=Homo sapiens OX=9606 GN=ZYG11B PE=1 SV=2
Q3UFS0	Protein zyg-11 homolog B OS=Mus musculus OX=10090 GN=Zyg11b PE=1 SV=2
A0JMZ3	Protein zyg-11 homolog OS=Xenopus laevis OX=8355 GN=zyg-11 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12799	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR025875	Repeat	Leucine rich repeat 4	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR051341	Family	Zyg-11-related ubiquitin ligase adapter protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12904	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031462	Cellular Component	Cul2-RING ubiquitin ligase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10350	ZYG11; Zyg-11 protein	-	Ubiquitin system	ko04121	deepkoala