Gene detail

Detailed information of XP_031551385.1 in Actinia tenebrosa

Genomic Location: NW_022258603.1:53936...89732
NR annotation: XP_031551385.1, voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X3 [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_031551385.1

ATGGAGATTGAACAAAATGATGTCTCAATTTCACTGGAGAATTCAACGAGAGAGCTTACTCCTCCAAAGGTAAAAGAGAGTGAACCCGAAGCCGAAGTCATTGATGTCGAGAACAGGTCGTGTTTTATTCTTACACAGAAAAGCTTCCCGCGAAAATGTTTCATTCGAATATTCAAAAATCCGTGGTTCGAGCGCGTCAGCCTGTTCGTCATCTTCGTCAACTGCGTCACACTGGCCATGTACGACCCTTATGACAGACACTGTCAACAGCTGCGCTGTACAGTACTCGAGATTCTAGAACACTTTATCTTCGCCTTTTTCTTCCTGGAAATGGTTATCAAGATGATTGCAATGGGAGTCCTAGGGAAGAAAGGTTACATGCAAGATTCCTGGAACAGACTAGACTTTGTTATAATTATCGTAGGAATCGTAGAAAAGTTAATGAAGGGAAGTGATTATCTAACGATCATCCGGGCCTTTCGAGTCCTTCGTCCTCTACGAGCCATCAATAAAGTACCAAATATTCGTATACTAGTCACTCTCCTATTGGACACGTTACCAATGTTAGGTAATGTTCTTCTCCTGACGTTTTTCATCTTCTTTGTGTTTGGAATAATCGGTGTTCAGCTGTGGCAAGGAAAACTTAGAAACAGATGTTTTGCGGATCTGCCAGAGAACAGTACAATATTGCTCGACTTCAATAAATCTCTGTTCTACAAACCAAGTTTTGAGAAGCCAGATTTTCTCTGTTCCCTTCCAAAAGACTATGGCATGACGAAATGCCCTTCTGACGTACCTTCATCATATCAGAGCAAAATGCTTTGCACCCAGTCCCCCTATGACCAGTTAAACCGTGCACAAAACAGCAGCCAGTGTGTGGACTGGAATCGAATCTATAGCGTGTGCAAAGCAGATGGGCCCAATCCTTTTCATGGGGCGGCGTCTTTTGATAATATAGCTATTGCTTGGATTGCAATATTTCAGGTGATCACACTTGAGGGATGGTCAGAGCTCATGTACCTGGTACAAGACTCGCATAGTTTGTGGAACTGGATTTACTTCATCATTCTAGTCGTGATTGGATCGTTCTTCCTGGTCAACCTGTGCCTGGTCGTTATCACGATGCAATTCCAGGAAACAAAAGCCCGCGAAATCGAATTGATCGAAGAGAGCCGCAAACGTCAAGGTGTGAACATCTCAAGCATGCAAACCTACTCGTGCCTCCAAACCGTTAAAAACTACATCCGTTCCAAACGGGCTGTCAAGAAAGAAGACGTTCATCATCATCATCATCACTTCTACCATCATCATCATTTTCATCATCACCTTTATGACTGCTACTCGCCTGCGTCACCGTTATTTTTAACTCCTACCGAAACAAAGCCTGCGTTCTTTGCTGGTCAGCAGGAAGAACCAGCCAGAGTTCCTAGTATAACAATTGAGAGCGTTGATAATGAGAATAGCAATGAAGGGACAACAGGAGTTTCAACCAAGCCGTTTCTACTTCCTCCTGAACAGTTCATACCAAGAAGGGAATCAGAGGCTTCGCTTTTCGCGGGCGCCATTTCTATCCATACTGAGGCCTCCTCCTCCGTCCATGATAAGGAAATTCTAACAACTTCAAGTGTGACCTTGACAGTCCCAGGATCCCATTCTGCCGGCACGTTTGCCGCTGCTCATGCTACTGCGTGCGCAACATCTTCTTTACCGATCATTAAAGTCACTGAAGACGATACTCTTGCTTCTGCTCATGCGTCGGCTTCTGCAACCGCTGCTTTGAGTGCGGACAGATTTCAGTCGCGACCACGAAGTTCTAGCGAATCTTGCAGTAAACCAAAAAAGCGCCACGACTTCGACTTGATTCCTTCACCGTCGAGTGCACGACGTTATCAACGACGTCATAGCCAGCCATTTGGTGAACAAGAAATCGAGTTGTCAAAGCGCTCTCCCATGAATTCAAGAAAATGGCTAGATTTACAAGAAATTGAAATGAAGAAGCTAGAAATCCAGACCAATCAGCTTCAGAAAGAATCATCATTTGTTAGAAAAATTAGCATAAAGCGCGGGAAAGATGAAAAGCATAATTCGAAGAGTGATGATTCGATAGCGTTGCTAGGAGACGGCGGGATAGCGACAAAACAAGTGATGTCAAGTGATGCACATCAACCAAAACCTTTGGAATGTCACGATAATAATAACGTCGAGGATGTYGATGAAATGAAAAGCATTGATAATAAAGTATATAAGAAATCAACCGCTTCTGAAGACTTGCATGCCGGACTCCCACAAAAGGACGACGATATGTACGACAGTATGTTTGACCTGCACCAGTGCGACTCGTACGACGTCGAGCAAAACAATGGATTGTGCTATCGCTTTCGTAACTTCTGCAGAAAAATTGCTGAGAGTAGACACTTCATACATTTCATTATGACGTCCATACTGCTGAATATGGTCTGCATGGGTATGGAACACCATAACCAGCCCGAAGGACTAACGAAAGCTCTTGACAAGTTTAATATCCTCTTTGTAACGATCTTCTCGGTGGAGATGGCCATAAACCTTCTTGCTTATGGCATAACAGAATATCTTAACCAACTACTCAATGTTTTTGATGGATTTGTTGTCATAGTCAGTATCACAGAGCTTCTAGTTGAAAGTGGCCAAACCAAGCTGTCCGTATTTCGTAGCATTCGATTGCTTCGTATCTTCAAGCTCGTTCGTCCCGTGCGTTACCAGCTGTTGATAGTCATTCGCACCATGAACAGTGTCATCACATTCTTTGGTCTTTTATTCCTGTTCATGTTCGCCTTTTCGATCCTTGGGATGAACTTGTTTGGTGGAAAGTTCGTTTTTCGTAACGCGGAGAATGAACCTATGGTGACAAGATCGAATTTTGACAGTTTTCTTTGGGCTATGGTCACTGTTTTCCAGATTCTTACTCAGGAGAATTGGAACCTCGTGATGTATGATGGGATGCGTGCTATTAATAACTGGGCTGCGCTCTAYTTCATCGCACTCATGCTTATTGGTTATTATGTGTTGTTCAACCTTCTGGTTGCAATTCTCGTAGAGGGTTTCACCAGTACTGGGAATAGAAATGGCTCACTACACGAGGAAATCCGTATTCAAAGTGTTGCGCCGACCCCCTCTAGCTCGGTCAGTCGAGATGAAAATGCAGATAAAAAATTACGCTGCGACTTGACACCTCCAAAACCTTCAATTCTCATTAACGGTGTAGCAGAATGGGACGAAAACGGTTGCACAAGTAAACCGGCATCAAGTGACCAACACTACTGCTATCATGCTGTCCGCAATGCATTCCGCTCGAATCCAGTAATAGCGCCAAGCGAAAAATCTGTCAAAAGAAAATCTTTGAAGAAACGTTTACAAGAAAGAATCTCACGCGTCAGTACTTCAGCCACGTCTTTTTCCGATGTCGAGGGCCTTGATGGTTTTCTCACCATGCCGGAGCTGAAGAAGAAGCGACAGACATCAGTTGCGCTATTGCGAAAGACGCGTACGAAGCATCGTCCTTCGAACGCAAACCTGTGTATATTTAACCCTGCATTTGCAATAGATGATGAGGTAAAGAACGACATGGCGGAAAAAGTTGTCAAGGGTAACAACAAAACATTTTATTTTCACAGAAAACTGTCGCGCAAAACAAGCAACGATGTTCCTCGCGATAAAAAGACACTAAAAGAAGGCTGTGATTTGAATGGGAAGTCCCCAAATGATGTCAGAAAGACGGGTCAGACAACCCTAGCGGAGGCTCCTTTGGCTGATATTCGAACCGAAATGCCACCGGATATTGACCTTTCATCAGGAGAATACGAACGAAGGGACATGCTGGGGGAAAGCGTGACGCCAACCCAAGGTGATGTGTCCTATTCTAACTTAGAAATACGCGCAGAGCCAAGCTTGACCCAAGAGGATGAAACTTGTAATATAACAGAAATAAGCCATCAAGAAAGGAAAGTATATTTAGAGGAGTCAGTTTCGACTACCAAAGGTCGTTTTGGAACCAGAAGCAGCTTTTCGCTTTACTTATTCTCACCTCAGAACAGATTTCGTGTTGCCATGGTTACCGTGTGTGACCACAAGATATTTGATTACGTCATTCTGGTGTTTATTCTGTTGAGCTGTGGCGTGTTAGCCATGGAGGGGCCAGATGTGGACCAAGATCCCCGCAAGAGACAGATAATCGACATATCAATGTTCGTGTTCACTATCATATTTACCATCGAGATGATCATGAAGATAATCGCAATGGGATTCGTACTTGGTCCAGATACGTACCTTAAGCTTGGCTGGAACGTACTGGATTTCGTACTAGTACTGATGTCCTGGTTAGATGTGATCATTACCCACGTACCAGACGCATCAGTAGATATCCTCGGTTCTCTAAAGGTGTTCAGAGCACTTAGGACATTGAGGCCTTTACGGATGATTCATCGAGCTCCTGGACTCAAGCTTGTCGTTCAGACTCTGTTGTATTCCCTACAACCAATTGGCAACACTGTTCTTATTGCCGGAGTATTTTACGTCATGTTTGGCATCTTGGGAGTACAGCTGTTTAAGGGGCAGTTCTATTACTGTGAAGGAGACAGATACGTGATCAATCGTGCACAGTGTTTAAACAGTACTCGTGGACATTGGGTCAATCGACGCTACAATTTTGACAATCTACTACAGGCTCTAATTTCTTTATTTATTGTATCGACACGTGATGGATGGATCCAAGTGATGCATCATGGGATTGATGCAGTCGGTGTTGATATGCAGCCTGTAGTTAACTATGCTGAGTGGTGTCTCATTTACTTCATTCCTTTCCTACTTCTTGGCGGATTCCTTGTTCTCAACATGATCGTTGGAGTCGTGGTAGAGAATTTTCAGCGGTGCAGAGCGAAACTAGACGAAGAAGAGCGGAAATATCAAAATATGGAAAAGGATAGAAAAGCAAAGAAGAAAGCTCATGAGCGGCAAACCTCGGGGGTGGCCAAGTGGTCCATACTTTGTGACTTTAACAACTGGCCGATTAATAGAGTGGATGATGATCAGTATTATGCGGAGTTCAACGTGGTTCGTAGACGTATTCACAATTTGTGTATTCACCAGTATTGGGATATCACTATTGCAATAATTATCTGCCTGAATGTGATATGTATGTCCCTGGAGCATTATAACATGTCTAAGGATTTCTATGTTTTTGTCGAGACTACAAATTATTTTTTCACGGCTGTCTTTGCATTGGAAGTGGTGTTGAAGGGTATTGCGCTAGGACCAGTCAGATACGTCAAAGATAGGTGGAACATTGTGGACTTGATTATCGTCATACTGTCAGTGTTAGGAATATTGTTGACAGACCTCGTGAATAAAGACCTGCCAATAAACCCTACTGTTATAAGGACCCTGAGGGTACTAAGAATAGTCAGAGTTTTAAAGCTTGTGAAACTAGCTAAAGGAGTTCGGTCTCTTCTGGACACGCTGTTTGAGGCCCTACCACAGGTTGCAAACCTCGGTCTCTTATTTCTTTTGCTGTTTTTTATTTATTCCTGTCTCGGAATTCAGCTCTTCGGTTCGCTTGAGTGTTCCCATGACTACCCCTGTGAGGGACTGGGTCGTCATGCTAACTTTCATGACCTTGGTTCCGCCATGTTGACTTTGTTCAGGATCGCTACAGGGGATAACTGGAACGGAATCCTTAAGGACACACTGCGATCCAAGTGCGACGGTTCAGCGGACTGCCGTAAAAACTGCTGCATCACTAAATACACAGCACCGCTTTACTTCGTTACCTTCGTACTGTCGGCTCAGTTTGTTCTCGTCAATGTCGTCATAGCCGTTCTCATGAAGCACTTGAAAGAATCCAAAGAAAAGTTAGCGGCCACGTTAGCAGCTAAGGACTTGGAGAAAAAACTTAAAGTTTTGACTTTAGTGGCGAGGAATTTCATCCGTGCCAAAGCGTCACGCAAACCATCCACGCCCATCACAAGAAGAAGGTCTGTTGTAGAGCTTGGTTTAGGAGGGATAGAATTAGCACAACTGAAGAAGCACAATAAAGATGGCATAGATGAATCCTTCTATCAAGAGAAAACAAGTCGTCAAGTCAGTCGTAACAGCCGTAAGGCGAGACACAGTCAAAGACATTATGAATGA

Protein

XP_031551385.1

MEIEQNDVSISLENSTRELTPPKVKESEPEAEVIDVENRSCFILTQKSFPRKCFIRIFKNPWFERVSLFVIFVNCVTLAMYDPYDRHCQQLRCTVLEILEHFIFAFFFLEMVIKMIAMGVLGKKGYMQDSWNRLDFVIIIVGIVEKLMKGSDYLTIIRAFRVLRPLRAINKVPNIRILVTLLLDTLPMLGNVLLLTFFIFFVFGIIGVQLWQGKLRNRCFADLPENSTILLDFNKSLFYKPSFEKPDFLCSLPKDYGMTKCPSDVPSSYQSKMLCTQSPYDQLNRAQNSSQCVDWNRIYSVCKADGPNPFHGAASFDNIAIAWIAIFQVITLEGWSELMYLVQDSHSLWNWIYFIILVVIGSFFLVNLCLVVITMQFQETKAREIELIEESRKRQGVNISSMQTYSCLQTVKNYIRSKRAVKKEDVHHHHHHFYHHHHFHHHLYDCYSPASPLFLTPTETKPAFFAGQQEEPARVPSITIESVDNENSNEGTTGVSTKPFLLPPEQFIPRRESEASLFAGAISIHTEASSSVHDKEILTTSSVTLTVPGSHSAGTFAAAHATACATSSLPIIKVTEDDTLASAHASASATAALSADRFQSRPRSSSESCSKPKKRHDFDLIPSPSSARRYQRRHSQPFGEQEIELSKRSPMNSRKWLDLQEIEMKKLEIQTNQLQKESSFVRKISIKRGKDEKHNSKSDDSIALLGDGGIATKQVMSSDAHQPKPLECHDNNNVEDVDEMKSIDNKVYKKSTASEDLHAGLPQKDDDMYDSMFDLHQCDSYDVEQNNGLCYRFRNFCRKIAESRHFIHFIMTSILLNMVCMGMEHHNQPEGLTKALDKFNILFVTIFSVEMAINLLAYGITEYLNQLLNVFDGFVVIVSITELLVESGQTKLSVFRSIRLLRIFKLVRPVRYQLLIVIRTMNSVITFFGLLFLFMFAFSILGMNLFGGKFVFRNAENEPMVTRSNFDSFLWAMVTVFQILTQENWNLVMYDGMRAINNWAALYFIALMLIGYYVLFNLLVAILVEGFTSTGNRNGSLHEEIRIQSVAPTPSSSVSRDENADKKLRCDLTPPKPSILINGVAEWDENGCTSKPASSDQHYCYHAVRNAFRSNPVIAPSEKSVKRKSLKKRLQERISRVSTSATSFSDVEGLDGFLTMPELKKKRQTSVALLRKTRTKHRPSNANLCIFNPAFAIDDEVKNDMAEKVVKGNNKTFYFHRKLSRKTSNDVPRDKKTLKEGCDLNGKSPNDVRKTGQTTLAEAPLADIRTEMPPDIDLSSGEYERRDMLGESVTPTQGDVSYSNLEIRAEPSLTQEDETCNITEISHQERKVYLEESVSTTKGRFGTRSSFSLYLFSPQNRFRVAMVTVCDHKIFDYVILVFILLSCGVLAMEGPDVDQDPRKRQIIDISMFVFTIIFTIEMIMKIIAMGFVLGPDTYLKLGWNVLDFVLVLMSWLDVIITHVPDASVDILGSLKVFRALRTLRPLRMIHRAPGLKLVVQTLLYSLQPIGNTVLIAGVFYVMFGILGVQLFKGQFYYCEGDRYVINRAQCLNSTRGHWVNRRYNFDNLLQALISLFIVSTRDGWIQVMHHGIDAVGVDMQPVVNYAEWCLIYFIPFLLLGGFLVLNMIVGVVVENFQRCRAKLDEEERKYQNMEKDRKAKKKAHERQTSGVAKWSILCDFNNWPINRVDDDQYYAEFNVVRRRIHNLCIHQYWDITIAIIICLNVICMSLEHYNMSKDFYVFVETTNYFFTAVFALEVVLKGIALGPVRYVKDRWNIVDLIIVILSVLGILLTDLVNKDLPINPTVIRTLRVLRIVRVLKLVKLAKGVRSLLDTLFEALPQVANLGLLFLLLFFIYSCLGIQLFGSLECSHDYPCEGLGRHANFHDLGSAMLTLFRIATGDNWNGILKDTLRSKCDGSADCRKNCCITKYTAPLYFVTFVLSAQFVLVNVVIAVLMKHLKESKEKLAATLAAKDLEKKLKVLTLVARNFIRAKASRKPSTPITRRRSVVELGLGGIELAQLKKHNKDGIDESFYQEKTSRQVSRNSRKARHSQRHYE

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O88427	Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus musculus OX=10090 GN=Cacna1h PE=1 SV=3
O95180	Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo sapiens OX=9606 GN=CACNA1H PE=1 SV=4
Q9EQ60	Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus norvegicus OX=10116 GN=Cacna1h PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001282 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002077 all species →	Family	Voltage-dependent calcium channel, alpha-1 subunit	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR043203 all species →	Family	Voltage-gated cation channel calcium and sodium	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10037 all species →	VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005245 all species →	Molecular Function	voltage-gated calcium channel activity	Interproscan
GO:0005891 all species →	Cellular Component	voltage-gated calcium channel complex	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0001518 all species →	Cellular Component	voltage-gated sodium channel complex	Interproscan
GO:0005248 all species →	Molecular Function	voltage-gated sodium channel activity	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008332 all species →	Molecular Function	low voltage-gated calcium channel activity	Interproscan
GO:0043005 all species →	Cellular Component	neuron projection	Interproscan
GO:0070509 all species →	Biological Process	calcium ion import	Interproscan
GO:0086010 all species →	Biological Process	membrane depolarization during action potential	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_031551385.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.