Gene detail

Detailed information of XP_031552822.1 in Actinia tenebrosa

Genomic Location: NW_022258828.1:4399...12510
NR annotation: XP_031552822.1, fasciclin-2-like isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031552822.1

ATGAGTGTGTGTCAAGAACCTATCATTTCTTGTTATATACTTGGTTTCATCGTCGAATTGTTTTTACTTCCTTGCGTAGATGGAGCTGTAAGATTTACTCAAGTTCCACCACCTATCTTGTTTGTTCATAATGGAGAAAATGCAAAATTTGTCTGGAATTATCATGTCAATGACCGAGACAGTGAGTTTTTTACAACGTCACCAGAATGGCTTTACACTAATAGCATTAACCAGACTCGTATTGCTGCTGAAGCCTGGACTTATGTACATGCAACTGGGAAAATGGAATRGATATGGACAGTAACGCCATCATGTCCAGCAAGACTGAGACATCGACTCAGCAAGGAATCTGTTGCTACTCTGGTCATCTCAAATGTGAGCACGCTCGATAATGGGAACTATAATTGCTCACTGATTTTAACTGGAGGTCAGGTTCAAATAAAGAGCACAACACAGCTGATAGTAACAGTGCGTCCTACATTCTTACCAAGTCACCCAAACAACACATACCAGATTATCGAGGGAAAGGATTTAAAGATAAACTGTACAGCTATTGGTCCACCAACACCAACCATCACGTGGGTGAATATATCAGATGGTAGTGTTCATCCCAAGAGCCATGGATCAGGAAGTGCTGTACTGCAGATAGATAACATTAAACGATACCATGCTGGAGTATATGAGTGTAGGGCCAACAACAACCCAAACGAGACTGCAGCCACTAAGAGGACAAAGGTTTTTACTAAGACACAAAACAAGGCTGAAAATATGTTCTCCTATTTTTTAATTTTGGTTCAACTTTTCTTAGACAAGCCTACAATCTCGAAAGAGCTGTCTAGCAGTGATAATACTTCTTGGAATGGCAGACAGATAACTCTCAAGTGCACCGTCGGTGATGGATTACCCACGCCAGGTATCACTTGGTACAAGCCCAGTGGTCAGAAAATAACTACTGGTGTCACAGCTATTGGTAAAGGTAGTCACGTGGTGATAACAACGACAGATGGAGCAGACTATGGATGGTATAAATGTAAAGCCACAAACGTCGCTGGGAGCGTTGAACATCTTATCAATGTGATTCAGCTGTTCCCACCAGGTGTCCCTAATGCCACGATACTAGAACAGGATATCAAAGCATCATCTGTAACTGTAAGATGGACCAAACCTGGTTATGATGGTGGAAGTCCTGTTATTGATTACAATGTACAAATCAACAGTACGAAACAAGAACAGAGCACATCAAACTCTGAGTACGAGTTTACTGGTCTGACTAAGAATACAAGGTATGAAGTCAGAGTCTACGCAAGGAATGTGGTTGGGTATGGAAATGCATCGATCATCAACTTTACTACACAGAAAAGAGGTCCACCACCTTTGCCCAGTCTTCATCTTGTCAAAAATAAAACTGCCATAACACTGTCCTGGATGAAACCCGATGAAAATGGTGGTGAAATAATAGATTATACCATCTACCAGAAACAAGGTGTAGTAAAACCCTGGGCACGTATACATAGTGTCGTACGTGAATTGTCCAACTTGACGTTTGTTATACAAGTGAAGGATCTGGAGCCTGGTCAGACATATTGGTTTATTGTCACGGCAACGAACGAGTATGGAGAAAGTGAAATAGGAGATGACAAGGGCAAAGCAGCGTTTATTTCGCCGAACCCGGTTACCACAGCAACCCAGGCATCTACTACAGGACTTGGCGTCACTGCATTAGCTGTCTGCGCATCTTTCCTCGCGGTGTCTTTGGTAGTCATTGTTCTCTTGCTCCTTTACATTTGGAGGAACATGAAAAGAAAAGAACCAACCAGAAATACCAATACAGAAAGAGTTAACAGAAACAAGGCAGTTGAAGATCCTGTTTATGACAATACGCTAGAAATGGTCGTAAACAAGACTTCTCACAGCTCGGTGTTACACTCTCCCCCACAGAGCCCTCCACCCAGTGAATACGAACCGATAAGAATTTATCGTGATGATCATTCAAACGAAATGACAAGCAGAGTAAGTGGCTATAGCAGCACCTCTACAGAAACACCAAGGCATTATCAAGCACTGTCACATTCTGATACAGCTGGAGGTTCATCGCATCAAGGTCAAGGTCCAGCTTACGAATCCCTTCACAGTTCACAGCTTCAACAGCGTGATGCTCAGCTTGCAAAGAACGTACCAGAAACTACATACCAGCCACTTGATGTCAGGCAAAACACTACACATTACCAAGGCCTGCAGACCTATAATAACATGCATCAGCTAGAAAACAACAGGAATAACCAAACCATTAGATAA

Transcript

Protein

Uniprot

Uniprot term	Description
A2ASS6	Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1
Q9VS29	Cell adhesion molecule Dscam2 OS=Drosophila melanogaster OX=7227 GN=Dscam2 PE=2 SV=3
Q8WZ42	Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050964	Family	Striated Muscle Structural and Regulatory Protein	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13817	TITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05060	IL6ST, GP130, CD130; interleukin 6 signal transducer	-	CD molecules	ko04090	deepkoala