Gene detail

Detailed information of XP_031554380.1 in Actinia tenebrosa

Genomic Location: NW_022259060.1:46079...54014
NR annotation: XP_031554380.1, U3 small nucleolar RNA-associated protein 14 homolog A-like [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_031554380.1

ATGGCGGCCAAGGAAGCTCTAAAACTCGTAGCTACAGTAAATGAAGATTCGGATGTGGAGGTGGACGATCAGCTGTTGAGTTCCAGTGATAATGAAAGTGATGGACAAGAAGAATCAAGGCACAGCAATGTGATTAAAATAATTAAAAATCTTGACAAAAAGTCATCTAAGAGGAAAAGAAATCAAAGATCTGAGCCAAACCTCAAAGTATCTGAATTTCATCTAAGCAGTGGTGGAGATAATGAAAAAATTGACATCAAAGACTTGATTGGATCACTACAGAAGGAAGGCCAGTATGGAAAGCTCAAGAAGAAATTGGAAAGCATGGAAAAAAATGCTGCAACTCTTGATGTACCATTACCTCAACTAGAAACAAATAAAATCCAAAGAACCATTGCCTTTGAAGAAACATCAAAAGAAGTTGGCAAATGGCAGCCCATTGTGAAGAAAAATAGAGAGGCTGAACATTTGTCATTCCCACTAAATCCTTACAAACCTCCTGAGATTACAACTAAATCTTTATCTGTTACATTCAAGCCAAGAACACCCCTAGAACAGGAGATTGCTGCTGTATTGAATGGAAGTTCTCACTTGATGGAAAGAAAAAATAATGAGCTTACAGAAGAAGAAGAACAAGCACTTCTTGCTATGGATCTTGAGGAGGCAAAAGAAAGAAGAAGTGAACTACAGCGACTCAGAGCTCTACAGTCTTACTATGAAGAAAAATGCAGAAGAGCCAAAAAGATCAAAAGCAAAAAATACCATAGAATCAAAAAGAAATCAGAACAGCGTGCTGCAAGCAAACTTTCCATTGAAGAACTCCAGTTAAAAGATCCACAAAAAGCTGCAGAAGAGTTAGAAAAGATGGATCGTATCAGAGCAGAGGAGAGACTTTCTCTAAAACACCGTTCCACTTCCAAATGGGCAAAGAATTTACTCATTAGGGGACACAAGAATCCAGAGGCTAAGAAAGCAATACAAGAACAACTTGAATTGAGTAGAAAACTTACAGAGAAACAGCAAGTACACACAGAAAGTGATGATGATGATGATGATGACACTAATGCTATTGACCCATCAAGTATGTTTGGGAATCTAAAGGCAGATAGTAACAACCCTTGGAGTTTGGATACTAATACTCGTCATGAGAAAACAACTGGTTCTGTACAAGACAATGAAACGACGGCCGGTTTCAAGCGTATTCCAGCTATTAATGTACAAGAAACGACAGAGAAGGCGAACAATGAATCAGAAGATGACAGTGAATCTGCAGAAGACAATACTGAAGATGATTTTGAAATAAAAGTATCAAACAAACCCAAGAAAGGGAAAAAGAAATCGAAGAAGAGAAAAACCAAGGACCAAGACTGGATAGAAAAGGAAACACCGAAGAAAAAAGAAAGTTATAAAAGTAAAGTGAATAAGGTTAAAACTAAAGTAAAGGGAAAAAGTAAAGACGAAGAAGAAGATGATCTATTGGAGATTTTAATGCCGTCTGACGAGGAATCAAATAACGACAACGAGAAGCCGCCCACCTCAGTTGAAACATTCAACACATCACATGCAAAGGGGAAATCTGTCATCGTTGATCCAAATAAGATATTCCAAATGGAAGAATACAATTCCAACAAAGTTCTAACAGATAACACAGACAACAGCGATCATATCCTAAACATACAACAGGCTTTTGCTAACGATGACGTCATTGAAGAATTTGTTCGCGAGAAGGAAGAGGCGATGGAGTCTTCAAAAGGCAAGGACCTCGATCTGACATTACCTGGCTGGGGAGACTGGGGAGGACCTGGTGCGAAGGTTACCAGTAAAAAGAAGAAGTTTGTAAAGAAAGCCGAAGATCCACCGCCTCGTAAAGACAGAAACCTAGCACATGTTATCATCAATGAAGAAGATGACAAACGTTTGGCCAAGTTACAGGTGAAGAATATACCTCATCTTTACATGAGCTCAGAGCAGTTCGAGAAGAGTATACGTAATCCTGTTGGTAAAGACTGGAATACTGGATCAACAGTCAAGCAACTAATCAAACCTCGTGTTCAGACCTTGATGGGATCGATTATAGAACCTATTAAACCTACCAAGAACCTGAAAAGATCTAATGCACATAGCAGCGTTGACAAGAAAAGATTAAAAAAGAAAGACGAAGGATTAACCATTTATAATTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q640M1	U3 small nucleolar RNA-associated protein 14 homolog A OS=Mus musculus OX=10090 GN=Utp14a PE=1 SV=1
Q6EJB6	U3 small nucleolar RNA-associated protein 14 homolog B OS=Mus musculus OX=10090 GN=Utp14b PE=1 SV=2
Q5TAP6	U3 small nucleolar RNA-associated protein 14 homolog C OS=Homo sapiens OX=9606 GN=UTP14C PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004882 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04615 all species →	Utp14	Utp14 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006709 all species →	Family	Small-subunit processome, Utp14	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14150 all species →	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0032040 all species →	Cellular Component	small-subunit processome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14567	UTP14; U3 small nucleolar RNA-associated protein 14	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.