Gene detail

Detailed information of XP_031554563.1 in Actinia tenebrosa

Genomic Location: NW_022257998.1:51254...56811
NR annotation: XP_031554563.1, 39S ribosomal protein L44, mitochondrial-like [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6Q1H0	Ribonuclease 3 OS=Nitratiruptor sp. (strain SB155-2) OX=387092 GN=rnc PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007971 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14622 all species →	Ribonucleas_3_3	Ribonuclease-III-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000999 all species →	Domain	Ribonuclease III domain	Interproscan
IPR036389 all species →	Homologous_superfamily	Ribonuclease III, endonuclease domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11207 all species →	RIBONUCLEASE III	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004525 all species →	Molecular Function	ribonuclease III activity	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0070125 all species →	Biological Process	mitochondrial translational elongation	Interproscan
GO:0070877 all species →	Cellular Component	microprocessor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17425	MRPL44; large subunit ribosomal protein L44	EC:3.1.26.-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.