Detailed information of XP_031554591.1 in Actinia tenebrosa

Genomic Location: NW_022257999.1:37323...39828
NR annotation: XP_031554591.1, D(4) dopamine receptor-like [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P51436D(4) dopamine receptor OS=Mus musculus OX=10090 GN=Drd4 PE=1 SV=1
Q32ZE2Adenosine receptor A2b OS=Oryctolagus cuniculus OX=9986 GN=ADORA2B PE=2 SV=1
E7F7V7Galanin receptor 2b OS=Danio rerio OX=7955 GN=galr2b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000446 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00001
all species →
7tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276
all species →
FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452
all species →
DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24248
all species →
ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →
Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →
Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0071880
all species →
Biological Processadenylate cyclase-activating adrenergic receptor signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_031554591.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_031554591.1 across 18 RNA-seq samples of Actinia tenebrosa. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

18Samples
0TPM > 0
6Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism 5 0 0.00 0.00
Tentacle 4 0 0.00 0.00
Mesentery 3 0 0.00 0.00
Acrorhagi 3 0 0.00 0.00
whole 2 0 0.00 0.00
whole organisim 1 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (ATENE_TPM, StringTie quantification over 18 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

TOP