Genomic Location: NW_022258008.1:14203...20819
NR annotation: XP_031555797.1, retinoic acid receptor RXR-gamma-A-like [Actinia tenebrosa]
| CDS | |||||
| XP_031555797.1 | |||||
| Transcript |
| - |
| Protein |
| XP_031555797.1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q90416 | Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN=rxrga PE=2 SV=2 | ||||
| Q90415 | Retinoic acid receptor RXR-alpha-B OS=Danio rerio OX=7955 GN=rxrab PE=2 SV=1 | ||||
| P28700 | Retinoic acid receptor RXR-alpha OS=Mus musculus OX=10090 GN=Rxra PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00104 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor | Domain | Interproscan |
| PF00105 | zf-C4 | Zinc finger, C4 type (two domains) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001628 | Domain | Zinc finger, nuclear hormone receptor-type | Interproscan |
| IPR001723 | Family | Nuclear hormone receptor | Interproscan |
| IPR035500 | Homologous_superfamily | Nuclear hormone receptor-like domain superfamily | Interproscan |
| IPR013088 | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR000536 | Domain | Nuclear hormone receptor, ligand-binding domain | Interproscan |
| IPR050200 | Family | Nuclear hormone receptor family NR3 subfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48092 | KNIRPS-RELATED PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0000790 | Cellular Component | chromatin | Interproscan |
| GO:0004879 | Molecular Function | nuclear receptor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K08705 | NR5A3, ftz-f1; nuclear receptor subfamily 5 group A member 3 | - | Nuclear receptors | ko03310 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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