Gene detail

Detailed information of XP_031559130.1 in Actinia tenebrosa

Genomic Location: NW_022260168.1:736357...752295
NR annotation: XP_031559130.1, cleavage and polyadenylation specificity factor subunit CG7185-like isoform X3 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031559130.1

ATGGATTTTACGGATATTCGCGAAGATGAATTAGTTTCAAGCCTTGGTGTTGATTTTGAACATGGTAGAAGACACATGGGACCAAGGCAAGGTTTTCGTCCAGGATTTGGGCCTCGCCCACCCCATGGTCCAATGGGACTTGGCCGTTCACCTCACTCCAACCATCCTCCAGGGATGATGCAAGGGCCACCACGGCAACCAGAACCATACTTTGGCCACCCTGGTCCAAGAGGACATGGACCCTTGATGAGAGCTCCTAATATGGGTCCGCGAGGACCACCTCAGTCACATGGAATGCATGGACAAAGGCCAAGAATGCAAGGAGGTCCTGGCTCTGTTCCTCAAATGAGGCCAGAAACTGGAATGGGACGAGGTAGGAAACGAACACAGTCTGGGCCAAAACCTTCCCAGACACCAGAACGGCAAAGAAAGGGATCTAAAGGCGGTGGCCCTGATGAGAGACAAGAACAAACAACCAAAGAAGATGGTGCAAAGAAAACCAAGATGGATGCAGATCAAACAAAGAATAAAGATACTGAAGCTCATGAAAGTGATATAGATGAGGATAAGCTACTGAAAAGTGATGATGAAGGAGAAGAACCAGCCSCTCAGGAAGATCTTGATGCTGTTAGTATTCATGGTGATGAAGACATCGATGATATAGATAAAGAGGTCAAAAGTGGGAATCCTGGAAAGAGTGCAGTAAAAAATGAAGCTGCAAAGAAAGATGACAGTGATAGTGAAGGTGAAAAATCAAAAAGAGAGAGGTTCCCATCAGAAAGACCTAAAGAAGAAAAACCTAGAAGACCAGAACAAGGCAAACCAGATTTCAAAAGGTCTGATTTCAGAAGGCAAGATAACAGAAACAAAAAGGACTTTGCTTTTGGTCGAGGTAGAGGAAGAGGAGGGCCTGATATGCAACGATTTGGTGGTCCCCCGATGCGTATGGAGCCACCCAGAGGACCTATGATGAGACCAGGACAACCTGGTCGCCCTGGATTTCCAGGTCATATGATGCACCAAGGACATCCAGGATATCCAGGACATCCAGGAATGCAGGGTCCAAGGTTTGACCATCCTGGGTTACCTCCAAGAATGATGCATCCACCGGAAGATCCTCYACGTCATGGTCCAGCACCCTTTCCTGCTGGTGGTTCAATGTCTGGTCCTTCTGGACCTCCTATGCAAATGAAGCCACCACAAGGAAAGAACATACACATAAACCCACACTTCAAACCAGGACGAGGAATGCCTGAAGGTCCCCCTGGAGGACGTCCAGGCCCTCCAATGCATTCAGGGCCTGATGGGCCTGGGCCCAGAATGATGCATCTTCATCCTAACCAGGGTCCAGAACAATTACAACCTGGTCCTCCCATGCACGGGCCACAGCACATGGGTGAATCACCTGGGCCCAATATGAGGGGTGGTCCTCAAAGAATGGAGCCAATGAGACCTATGGATTCTGAACCGAGACCAATGCATGATGTTGGCCCCCCTGGACCAAGAGACCAACGTGGTCCACATGATGGACCTCCAAGAATGGACCATGGTCCAAGAATCCCACAAGGGCCTCAATTCCGAGGACAGCTTCCTGGTGGACCAAACATGGCTCCACCTCATCATGGTGGCCCTCAAGGCATGCAGCAAGGGCCCAGAGGTGGTGGTCTTCCTCCAGGTGGGAGGACACTAAGCCCACCACGCCCTCAGGCACACCAAGTTATGCCAGGAATGCATCCCCAACAAAGTGTTGGCAACCTCCCACCACATATGCAGCCGCATGGCCAACAAGGAATGCCGCCTCAGAGAGAGCCACAAGTACCATACAGTGAAGCTGACCGTATTGTTGTGGGAAACAGGGTTATTGTTCCTAATGTTGATCAACCCAATCCAATGCTTGGGCACATGCCGGCAGGATTTGGTGGGCAACCTAATGCAGCTCCAGGTGCTGCAGTTGCAGCAGCAGCAGCAGCAGTAGCTGCAGCATCACGACAGCAATACCCATTCCCACAGCAGTTCCCATTTGATTATTCAATGTATAGTGCAAACTGGCAACAGTTGCTGCAACAGAGGGATGCTTATGCCGCTGCAGCTGCTTATAATATGGAAAGCGAACGAAACAGAGCAGAAACTCCACGTCACACCAAGAAAAGACGTCACCGTTACACAGATGAAGAAAGTGTTGGAAGTGATCTTAGTAGTTCAAGGTCTTATTCTCGTTCTCCATCAAGATCATACTCCAAGTCGCCTGCAAGGTCCTGGTCAAGGTCAAGGTCTCTGTCTCTTTCTCCTTCAAGTGTCCGATCATCAAGGTCAAGGTCATTTTCCAGGTCACTGTCTGGATCTCCCCAAAGGTACTCTAGACCCTTGAAATCTCGTTATGACCGAAATGACAGGCCCGCCAGAAGTTATGATAGAGGAAGGGCCAGACCGCCACGACACCAGGACCGTCCAAGAGATATACGGCCAAGAGAAAGACCTCCCAGAATGGAAAGAGATAATAGACCCAGAGATCGCAACCTACCACATGACAGAGATTTACGTGATAGGGAAAGGGAAAGAGAACGAGAAAGAGAAAGAGAACAAGAAAGAGAAAAATTAAGGGATCAAAGAAGAGAACGAGAAAGAGAAAGGGATAGAGATAGAGATGCAAAGAGCCATGAAAGAGATAGAGACAGGAACAGAGAAGGTCGAGATAGTGGAAGAGACCAAGATAGGTCTAGAAGAGGTCGTGGGGAGTCAAAGCACTCTGAATCAGGATCTTCAAAGAGGATTGTGGTTGGACCTTCGGAAAGCAAAAGCAAGTCATCCTCTTCTGCAAACCCTGACTCAAAAGCCAGTCGTGTTGTTGTTACCAAGGGATCCAGTGGAGGAAAGCCGACCAATCGTGTGGTCATTGGTTCCTTGCCTGACCTTATCACTCCTAGTAGAGTCAAGGAACTCTTGGCTGGCATCGGACCTATACAGCAACTTAAAATGTCTACAACCAAACACAAAGCACTGGTAACTTTTGAAAAGAATGAGAATGCATTGGCTTGCCGCCGCAAGTTTCACAGAACTGTGGTGGATGGCTCACAAGTCACTGTAGATTTTCTTTGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan