Gene detail

Detailed information of XP_031563380.1 in Actinia tenebrosa

Genomic Location: NW_022261307.1:112152...129122
NR annotation: XP_031563380.1, A disintegrin and metalloproteinase with thrombospondin motifs 6-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031563380.1

ATGAACTTACCAATGAAACTCTACTTGAATTTTAACTATGGACTTCTGGTTGTACTTGGCAGTCAACTATTGTGTTTGGACGGACTGAAACGAATTCCTCGCCATGAATTGCATAAAGCCATGGCTACCGACAGAGAAGAGATGATTCGACTTTTTGGTGAGGATTCTGCAGAAACAGTGCCAGATTACAAAATTGCAGTGGTTCGGCCACACCGAACCAGAAGGGGGATCGAGGATGGCAGTAAACAGTACAGACTCTCTGCCTTTGGTGAGGATTTACATTTGGTGCTGGAACCAAATGATGCGGTGGTTTCAAGATCTCTGATCGTAATGAAGAAGTTGCCTGGTAATAAATGGACTCAAGAATTGTATACTCCAGAGGGAAGATTCCTTCAAGGTCACGTCGTTTCGCACCCAAACTCACACGTTGCTGTTCGTGAGCTGAAGAACGATAAAGAAATGACTGGCGGCATCTTTACCGATGGTTTTTTGTACAGAGTTCACCCAGTTTCGAAGAAAGCAAAGAAAATTTTATCCTTAAAAGGTCAAGGTCATCATGTGATAACAAGGCGGAGTATGAAAGACCCCAAAACTGGCTTTTTAAATAATCCCGCTTTTTTCCCTAAGCCAGTGCGAGTTTTTGACCAGGAAGAAGACACAGTTGTTTATGGGAGACAGCGAACTCGAAAGCGCAGAGATTTGAGCACAAAATAYATTGAGGGTATGATGACACTGGACAAAGTAAGCTGTGATTACTATGGACAGGAGAGCATGAGTGTCGTTCTTGCAATAGCAAACATGGCGAATCGACTCTATCAAGATAAGTCAATGGAACCGGACGTGAGATTTGTTTTGACTAAAGTAATATTGGTCAAAGCCTTCGAAGCTGGGCTGGACGTGCAGCAAAATAATATCGACTCCGCCGTCAAGTATATGGGCTTGTTTGCTAAATGGAGCAAGGACAAGAACTCTGCGCCTGGCGAGGCAGGACACTTTGATAATGGAGTACTGCTATCAAGAGATATTTGTGGACTGAAAGATTGCGTCCTTGGAGGAGTGGCCTATAGCGGGGTTCCATGTAGCTCAACTTTGGCTTATACTGTGAATATGGCCAGGGGCATTGACGCCGCTTTCTATGTCGCTCATGAAATGGGCCATAACTTCGGCCTTCCACACGACAATGGGGCATGTAACAATGGACACATAATGTCTGCTGGTCAAGGAAGCGGGCCAAATTCATTCCAATGGTCGAAATGTAGCAGTGATAGATTAAAATCTATTTTGGGTCGTGTAACGTGCTTCGATAACAAACCGCCCACAAGTATAAGTGTACCTAAACTACCTCCTGGCTATACGTTGAATGGTGACAAGCAATGCAAAATGCTGCTTGGATCGAGTTACAGATTATGTCCCCTGACGCTGGATAATTGCGCTCTTCTGTTCTGCATGAAAAGCGGTGGCTGCAGTAGTTTGGGTACCGCACCAGTCGATGGCACACCTTGTGGAGTTAGAAAGTGGTGCATTCGTGGTGAATGTACAGATGTCGGTTCCAGTGTCCCCCCTGCTGTCGACGGTGGATGGGGTGAGTGGGGTCCTTACGGCGAATGCACTAGGACTTGTGGAAAAGGCATTCGTTATAAAACTCGTGTATGTGACAATCCAAGTCCTCAACACGACGGAAAGCCCTGCCCTGGATTGTCTATTGGGGAATTTCAGATTTGTGAGAAACAACCTTGCGCTTCAAATACGAATTACCGCATGGAACAGTGTAAGAAGAAAAAATCTGATTATACCGGTTATACTATACGAGGGAACCCATGTTACCTATGGTGTATGGAAGGCAACGTAGGTCGTGGAGAAGGGACAGTAGCAGATGGAACAAGATATAGCGATGAGCCTTTGAATCACGATATTTGTATCCAAGGAAAACTAGTTTCTGCAGGCTGCGATGATGTGATTGATTCAGGAAGCACATATGACAGGTGTATGAAATGTCAAGGTGATGGCTCTGCTTGTGTTCCAGTCAAAGGAGTTTACGATAAGGATCATCAAGCTACTGGCGTGTCTAACGCTGACAAAATGTTTGATATACCAATTGATTCAACTTACTTTCAAATCAAGGAAAAATCACCTACACGAAATGTTTTGAATATTAAATTGAAAAACACCGACTCTTTTATATTTCCTAACCGTCCTCTCACGTCGTCTAGAGAAGCGGCTGGGACCACGATCGAGTACATTATAAATAACAACAACCTGAACGACGCAGAAACCATGAAATTTACGGGCCCAAACAAACAAGTTCTCGTACCCATGTTTGTTAATGTGATGGGCGATACGAATGTGGGTTATGATTACTTTTACTACAAGCCTGGCCAAGGTTCAAAGACAACTTTCGTTTGGCGGTATAAAGCTACCGGATCGTGCAGCGCTACTTGTGCTGGAGGTAGTAATCTGAAGTTTCCTTTTTTTTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q9WUQ1	A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Rattus norvegicus OX=10116 GN=Adamts1 PE=2 SV=1
O15072	A disintegrin and metalloproteinase with thrombospondin motifs 3 OS=Homo sapiens OX=9606 GN=ADAMTS3 PE=1 SV=4
P97857	A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Mus musculus OX=10090 GN=Adamts1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01562	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF13688	Reprolysin_5	Metallo-peptidase family M12	Family	Interproscan
PF17771	ADAMTS_CR_2	ADAMTS cysteine-rich domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR002870	Domain	Peptidase M12B, propeptide	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR041645	Domain	ADAMTS, cysteine-rich domain 2	Interproscan
IPR013273	Family	ADAMTS/ADAMTS-like	Interproscan
IPR001590	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08621	ADAMTS6; a disintegrin and metalloproteinase with thrombospondin motifs 6	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala