Gene detail

Detailed information of XP_031567072.1 in Actinia tenebrosa

Genomic Location: NW_022261476.1:1882...21360
NR annotation: XP_031567072.1, uncharacterized protein LOC116302026 isoform X2 [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_031567072.1

ATGGCTATCTTGAAAGCTAAGGAAAGTTACTGTGTGCTTCTATTATCTTTAGTGTTTTCCTTAGGGCAGTCTACAACGAATCAAGGGCTAAAGAAACCTGATAAACATTGCATTCATATTGTATCTATAAACGTGCCAAGCGATGACTCTGCACAATCCACCAACAATTATGCCTTCAAAGCAAATGTCAAAGAAGCTTTTCTCAGCAAAAATCCTGGCTTATTTCGTATAAAACATGGAGGATTTTTGGGAATCAAGGAAACTGTTGCAATTGAATCTGCGAAAAATCCTGGATACTACCTTCGTCACAAGAATTACAAGTTCCATCTACAAAAGGCTATCAACTCTTCTTTTTTTGCGAAAGATGCTACATTCTACCTTTTAAAAGTCCAGAACGATCCACCCTTGTATGCATTTGAATTATATGGCCATCCATCGTGGTTTATTATGCATAATAAGAAGAAACACATGTTAATGCTTGGTCATGTAAGAGGGTCAGAAAATGAAGTAATGGATTCAACATTTGCCTTCAAAAAAGTCCGCTGCCTTCAGAAACGTAGACAAGGACAAGTACAAAAGAAAACTGTGGTTGTTGGCCATGGCTCATTAATGGAAGACCAGTCTGACGATGATTCGAGTGATATGGAACATAACGAAGAATATGTTAACGACAAAAATGCTAAAACCGCTCCTGCATTTCAAACCAGCATTAACGAAGTTGTCATGAAAAGTGGCGAGAAAGATGAACCAAACACGGCTTCTGTAACCGTGGCAACGGCAGCATTTAACGCGTCTCGCCCCCAACAGAATGGAAGATCATTAGATGTCATGGAAAAAGACATAGAAAGAAAAGTAAATGATTTAGCTTCATCTTTGTATGAGCAAGATAACAAAAAGGCATTTACTGACGAGACAAAAACTGCTGACGTAGTAATACAGGACAATGATGTGGACAGTACCAGTACTGAACCTGATACACAAACAGTAGATCAGGATGTTGTCATCAAGACTGAAGAATCTGCGTCTAAAAGTCATGTTCTACCAGGCCGTTTCGTCCATAGCACACAAGTACAGAAGACTAATAAACCCACTCAATTTAGTAAAAAAGAACTGAAGACTGTAAGCTCATACAAATTTACAAAAAATGACAAAGCAAGTTCAAATGTTGTGAAAGGCAGTCCAAAGCTTGTCAATGAGCACTACGACATTATAGCCCGGGCATCCCTTGCGATACCCGAGGGAGCTAAAGATAAACGACAGAGCAGGATGATGGGATCAAATGGCGAGCCAAAAGCAGACAACAACAATCAGATAATCAATAACCAAAACCAAATCAAACGTTTACAAACGAAAATAGAAAACACTAAACAACTTTTCGGCAGTCTGGGTGAGAGTGTGCACATAGTAAACACATCAGTTGCAAGAACTGACCACCAGGATAATCATCCTTTACACAGCACTTCTTTGCTAAACAATGATAGCAACAAACTGAAGCCAAACGCAACTAAACCCTTTCATCGATATAATCCCCAGCAAAGGCTAAATGGAACGCTTGCCACAAACGGAAGACCAGTGGTTTATTTTTCAGAAACTTGCCAGAATTCGCTGCCCAACGTTTGTGAGGTATGGGCACAGAAAAGGTATTGCCTGACTTTTAACGAGCTGATGAAGCGTTATTGCAGGAAATCATGTGGGCTTTGCGATCCAATTGTTACAACGGGTTTTAGTCCGTGCGACAAGTCGTGTGGAGGCGGCATCCGACTGCGCATGATCAAAGTCAACAATAGACAAGTACTTCAACGAAGAGCCTGCAATACACACGAATGTCCAATCAATGGTGGCTACACTCCATTTTCTGACTTTAGTGAATGCAGTGCCACCTGTGGCAGAGGATTGCGCTACAAACACAGAACCTGTACACAACCCCCGCCGCAGTTTGGAGGAAAAGACTGCACAAGACTTGGAAGCCCCATTAAAACCGTTGAATGTCATGTGGCTAAATGTGAAGTTAACAACGAAAAGAAACTCAGTAAGGAGACTAAGGAATCACATTCTCTGAAGCAAGCAAACGATGACTATGAACACATGCCAGAATATCATGTGGAGAAGCTAAGCAATGGAGGATACACAGTAAAAATAGACACCCCTAAAAAGCTAAATTCTGGAATAATTAAGCATATCAGCGGCAATTTGTATCAATATGTAGACAGACATGGAAAAAAGAAAATTGTACGATTAAAGGGAAGGCACGGTAAATCGTTTCATGATCACCACGTTTATCACAAAGGAAAACCAGTGGCAAAGCTCAAATGTGGTGATTCAAAATTCCCAAAGTATCACCGAGTGGAGTCCAACTTTCCACCGACCAGGTCAGGCCTTGACAACCAAAACAGAGAATTAGAAGATGATGATCCTTACAAGATGTATGAAGATGGAAAAATTATGTACGATAAGTATGGGATACCAAGTGGCACAACGGATGAAGTCGTCAAGTCTTCGGCCTCACCATACAAAATTATTCTCCACAAGAACAAGAACCACGAACTAGTTGTCAGGGAAGAATGTCTGGAGTCCGACTCGTCTGTTAATCCTGATGATGGTGATGATGAAAACAAAGACTTTCAAAAACCCACTCAAGGTTTTTATGGTTACAATTTTGACGATCCCACTCATTCATATGGGTCATCCAATCTAATAGCTCAAAACACTTTGGGGAACGAAGTCAGGCAGGCTATGGGAAGCATAGGAAGAGCAATTGACTATGATACAGATGCTATAGCAACGAGTTCTTTAATGCAAAAAGAGGTACCAAAACTTACGTTATCTGAAGAACTAGTAGCCGAAAATGAAGAAGCCCTGAAAGAAAGACGATACGAAGAAAACATGGCTAGAAAGTCCACAGATAATTATGCTTTTTCGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3EWY9	Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
D3ZTD8	Semaphorin-5A OS=Rattus norvegicus OX=10116 GN=Sema5a PE=1 SV=1
D3YXG0	Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004788 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090 all species →	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF05270 all species →	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan
PF01549 all species →	ShK	ShK domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036195 all species →	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR052065 all species →	Family	Complement and asymmetry regulator	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR003582 all species →	Domain	ShKT domain	Interproscan
IPR007934 all species →	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22906 all species →	PROPERDIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046373 all species →	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556 all species →	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_031567072.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.