Gene detail

Detailed information of XP_031568261.1 in Actinia tenebrosa

Genomic Location: NW_022261527.1:183319...194393
NR annotation: XP_031568261.1, ribosome biogenesis protein WDR12 homolog isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
A7RHG8	Ribosome biogenesis protein WDR12 homolog (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g82024 PE=3 SV=1
Q9GZL7	Ribosome biogenesis protein WDR12 OS=Homo sapiens OX=9606 GN=WDR12 PE=1 SV=2
Q5REE6	Ribosome biogenesis protein WDR12 OS=Pongo abelii OX=9601 GN=WDR12 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF08154	NLE	NLE (NUC135) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR012972	Domain	NLE	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR028599	Family	WD repeat WDR12/Ytm1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19855	WD40 REPEAT PROTEIN 12, 37	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042254	Biological Process	ribosome biogenesis	Interproscan