Gene detail

Detailed information of XP_031568391.1 in Actinia tenebrosa

Genomic Location: NW_022261536.1:13627...32886
NR annotation: XP_031568391.1, uncharacterized protein LOC116303081 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031568391.1

ATGTTGTTGATAAGTATACAGATGCTGGTGCAAAAATTCTTGGTCTTTTTGTTTCTCCTTGAAGGAGTGTCTATGCTGTCTTGCTCATTTGATGATGGGTTGTGTGGATGGCAACACCCAGAAAATGCTTCCAAGAGATGGCTCCTAAACAAAGGAATAAGTCAGCACATTGCAACTCCCTACAGTGAGCCGAACTCACTTCCTTTTTCCGTAAAGTTAATTTATCCCAACTTCACGGGGTACGGAGTTTTGTCCTTTTCCTATGCAATGGAGGGTAGCATTACGTTATTAGTTAAGGTCGGAGAAAAGACAATTGTTAAGTTCGCTTCGAAACACCACATCAGATACGTTTGGCAATGGATTACAGTTCCTATCAATTCAAGCAACAATGAGGTTGTCCTCGAAGCATCAAAGCCATTTATGACCGCAACAGAACAAACCGCAGTTGATGACATAGTTTTCTTTGAAAAAGAAGCTCCAAGATGCACACCACTCACAGCTCCTATCAACGGTACGATAAACTGCACTTCTAGCAACTATGTCAACAGCATTTGTAAATTTGAGTGTCAGGGTTCAAATCTCGTGGTTGGACCTTTGGAAAGAAAATGTCTCCCTACAGGAGTTTGGTCTGAATACCAACCAYCTTGCGAGTTTCCCCAGATTCGTCTGACCAGTCCACAGGGGAACCTTAGCTCTAAGGCCGGTGTTGTAGAGTTACTCTTTAATGGTACCTGGGCCCCTGTATGTACACACCTGACCAATGAGGGTCGGCGCCAGTACACCAACATAGCATCTTTGACGTGCCGAAGCCTAGGATATAGCAACATTGGGATCAACATTCCTTCAGTACCAATGGATCGACTTGTTGACTCCTGGACAAATTTGGCTGTTGGTAGAGAATGTACTCAGGAGGATAAGTCGTTGTCACAGTGTAGAGGGCTTCAGATCAAAAGATATGCTTGTTCGAGTGACTACTTATTCTTTATTACATGTTTTAGTCCGCAGTGTCCAAGGAACTGTCAGTGTAGTTTTGGAGCCATCAGTGAATATACAGTAGGCTGTGCATCACCAGCTAGTGTGGATACTCTTAAATTGCTACCACATTATACCATCAATTTGGTGACGTTTGGTATCAACATGACAGACTTGAAAGAGGATTCACTTAAACACCTGCGACTGCTAAAAATATTGATGCTTAGAAAARCAGATATCAAGAAAGTTAATTCGAACATTTTCAAGCAGCAAAAAGGACTAAAAAAGCTTGATTTAAGAGAAAATAAGATCACCAGTTTGAATGATTTGAATCTTGAAGCTTTGATGCATGCAAAAATGGGAGACATACTAAAACTAGACAAGCCGTCGTTCTCATCTTATATTAGGCGGCATTACGAGAGCGTGCTCCTTAACTTGGATCTACAGAATAACCGCATAACTAATATTACCAAAGAGGCGACAAAAGGAATAGAGTTTGTGTACGTCTTAAATCTTGAAAATAATCGCATTTCGTACGTCGAAGATGACTCGTTTGGTAACTTTTTCAAGATAGCACTTATAAATCTCGCTCAGAACAGGATATCATATCTTCCCGAAAACTTTGCAACGAAGGATGTTATGTCTTTAGATCTGCGTTATAACCAAATCAAGCATATTTCTCTTGGTTCGTTTAATGGTGCAGCCCCATACGTTTTTATGGAACTATTTCTAGGCCAAAATCTGATAGGGAATATCTCTTCAATGTTCTATGGCTTATCTGATCTCATGTTGCTTGATCTAGGAGGCAACAGGATAAACAGGATCGACAAACACGTTTTTAAGTATTTGAGACGATTACAATCACTATCTGCTTCAAGAACAAACCTTTATGAAATTGAAGATATGGCGTTTCAACATCAGCGCTATTTATATAATTTGTTTTTAGATGGGAATAAATTGACAAAAATAACCAGGCTTACGTTCTTTGGCATCAACCTATGGCATTTAAGTATCTCAAATAATCCTTTGGAAGTCATTGAAAGTGGTGCATTGATTGACAATACGAATTTAATTGTAGTTTACCTAATTGGAACAAATCTCCACACCCTTGATATTGGAACGACCTTCCCTACGAATCAAATGACAATTTCTTTTGCACCAAGCGAAACGTTTGTGGACATGCTAATATATCCACCTGCGTCGGACTTTCTTCGGAGCACGGGATACCTCTGTAAACAGCCCAATAACTGGTATGCCCTCTGCAGACCCTGTCCTCAAGGGGAATACAAACTTACTTTCCTCAACGAGTATGGCTGTAAGAAATGCCCTGCAGGTGGCTTTTATCAAGACGATATTGCGCACGTTGGTGAGATCGTTCATGGCCTTGGGTGCAAACAATGCCCTTTGGGAACGTTTGTTAGTATCGCAAATGCTCCAGGAAGAGTTGAATCTTCCTGTTTAGCATGTCCCAGAGGTACAAACCTCAAACGATTAGCTGGGTTCAGAGCGTGTCCCTGTTTAGACAACTTTTATCGTTTGGATCGCTTCGGTGCTTGTAAAGAATGCCCCATTGGTTATCAATGCACCAATGAGACGATTAACCTACATCCGGGGTTTTATTGGATATGGAGCCAAGACACCGAGAAAGACAACTATCTGACATTTGCTGAAAAACTACAAACAGAAAACAAAGACCATGATTTAGATTGGAGAGCATTCAATGGAACTCTGCCGACTGCTTATGTCTGTCCTTTTCCAAGTTCATGCAAGGGAGGATTTGTTGTAAACTGTTCCAATGGCTACGAGGGAATTCTTTGCGCTCTCTGCTCCAAAGGTTTCTATAAAACGTACTCTGGTTGTAGCAAGTGTCCATCTCTCTTAGTAATCGTGTTTCAGTTCACTGCCGTCTTCACAGTTCTGGCAATTATCACCTTTGTGATTGTCAAAGACAAAAAAGCCAGAAGTGAACGCTCTGCGACGGATACAATCTTCAGCAGTCTTAMGATAATGATCGGGTTTTACCAAGTTACAAGTGGTACACTACGAGCTTACTCATACATCCAATGGCCTACAGSATTAACAAAGCTGATGAAGTTTGCAGATGTAGTGCAGCTGAACATCTTCAAACTTGTTCCAATAGAATGTCTGAGTCACTCCATCAAGATCACACCGTACGTTGGTCTTGTGACCTATGTTTCTCTAGACGTATTGGTCATATTGCTTGCCGTGGGATACCTGCATGCGACGAAATTCTTCTTAAAAATGAAGAACTTCAACCAGGAAGAAAGGAATAAAAAGCTTTTTGCCTGTAAAGCGAACTGTTACCGTGCAGTGTTTCTTTWTCTGTTTGTTACCTATCCAGCAACATGTGAGAAGGTGTTCCAAGTTCTTCCATTTGGATGCACTAAGGTCTGTGACAACCAACAAACATGTAACTGGTACCTACGATCAGATTACTCTGTCCAGTGCTACACATCAGTCTACAACAGGTACGCTCTTTTGGCTTTCTTTGCTCTGCTCATCCCCGTCTTGTTTCCAGTGGTCACTGTTATCATGCTGTGGAAGTACTGTAGGAACAAAGAGGGCGTTGAAGTTGGACAGAAAAAAACTAAAATAAACCTCGCAGGCAGCAAGAAAACGAAGTGGGGTTCAATCAAGAAGTATTTCAAGAAGAATCGAAACGAGATTTCGTTAGGTATGAGGTTTATCTACGAAAACTACAGTGACCACTGCTGGTATTGGGAAGTCATTGAGTTGGTCCGAAAGGTTCTTTTGACGTCGGTGTTGATTTATTCTGGTCAAAGTGGTCGCTTCTTTCTTGGAGTAGCAGCATCATTGTCTGGTATCTATGCCGTCATATTTGCCAATTCTAAACCGGTTCCATACCTGTTTGAACACTGGCTTCATCTCGGGTCTTTRCTTGCCACAATGGCTAACCAATCGATGGCATTGTTGCTAAAGATCCCAGAAGAAAGTCTGTCATCGYTGGTTAACGTGGAAGATGACACCGTCGGTGTGTCTTTGATGCTGGTGTTTGCAAATGTTTTTGTTCTTGTCATGATTGCAGTTCGTTATTTCTATGGAATATTCCTTTCACTTAAAGAATTCAGGAAAAACCCCAAATGCAGTGTTGGTTGTATCATGACGCTACTGCAAGTCGTAACCATTGGCGATGGGCAAGAACGTCCAGTGTCTACCAAAAGAGACAACTGCCGTCGATCAGAGAAAATTGATCGTCGTCTAACGGAGAAAACTGCGAGAATAGCTTGCAAAAAAACCCAGGAATAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00530	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR017448	Domain	SRCR-like domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR050328	Family	Multifunctional Developmental and Immune Receptor	Interproscan
IPR001190	Domain	SRCR domain	Interproscan
IPR036772	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24373	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan