Genomic Location: NW_022261582.1:181203...182978
NR annotation: XP_031569293.1, heat shock protein beta-6-like [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families
| CDS |
| XP_031569293.1 |
| Protein |
| XP_031569293.1 |
| UniProt accession | Description |
|---|---|
| Q91312 | Alpha-crystallin B chain OS=Aquarana catesbeiana OX=8400 GN=CRYAB PE=2 SV=1 |
| P82147 | Protein lethal(2)essential for life OS=Drosophila melanogaster OX=7227 GN=l(2)efl PE=1 SV=1 |
| Q9EPF3 | Alpha-crystallin B chain OS=Spalax judaei OX=134510 GN=CRYAB PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000649 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00011 all species → | HSP20 | Hsp20/alpha crystallin family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008978 all species → | Homologous_superfamily | HSP20-like chaperone | Interproscan |
| IPR001436 all species → | Family | Alpha crystallin/Small heat shock protein, animal type | Interproscan |
| IPR002068 all species → | Domain | Alpha crystallin/Hsp20 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45640 all species → | HEAT SHOCK PROTEIN HSP-12.2-RELATED | Interproscan |
XP_031569293.1. This gene does have a gene model — the search simply returned no hit.XP_031569293.1.Transcript abundance of XP_031569293.1 across 18 RNA-seq samples of Actinia tenebrosa. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism | 5 | 0 | 0.00 | 0.00 | |
| Tentacle | 4 | 0 | 0.00 | 0.00 | |
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Acrorhagi | 3 | 0 | 0.00 | 0.00 | |
| whole | 2 | 0 | 0.00 | 0.00 | |
| whole organisim | 1 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (ATENE_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
