Gene detail

Detailed information of XP_031569356.1 in Actinia tenebrosa

Genomic Location: NW_022261587.1:5879...20382
NR annotation: XP_031569356.1, dystrophin-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031569356.1

ATGAGCAGCAGAACTATAAGAACTGTTCAGCTCAAACAAATTCATCATGAAGGAACAATAACAGAGCGAGAAAATGTTCACAAGAAGGTATTCACCAAATGGTTGAATTCTCACTTATCAAAGGCCAACCCACCAATCAGAGTGGTCAATTTGATTAGCGATCTTTCAAATGGCAGTGTATGGCTTAATCTGTTTGATGTACTCCTCAACACCAAAACGGAGAAAGAAAGTGGCCGTTCACACTTGCATAACATCGCCAACCTACAAAAAGCTTTGGAAATTTGCCAGAAAAGCGAGATTAAAATCGAGGGTATCAATGCATCGGACATCGCCGAGGGAAATAGTAAAACAATTCTTGGCCTTCTATGGAATATTATCGTGCACTTTCAGATGAAGGGTACATTAAAAGCAGACTCCAAGAACTACAGCATCGAGAAGAATTTACAATCCTGGTGTCTTACACAGCTAGATAAGTACAAAGAGTTTGCCCAAGTGAAGGATTTTACCACGAGCTGGAGAGACGGCAAGGCCTTTAATGCTGTTCTACACTCCTACAAGCCTGATCTGTTTGATTTTTCACACATCATGACAATGGACAACATTAGTCGATTAGAACATGCCTTTACGATGGCTTCCTTAGAATGGAATGTGCCACGACTATTGGAGCCCATTGATGTCGACATTGAAAAGCCAGACAAGAAAATGATTACCATGTACCTAACATGCCTCTACGAGCGACTCGAGTCATATGACATTGGTATGCGTCAATCACAGCGCGAGGTTTCTTCTACGTCATCAGTCAGTCATCAATATGTCACGAAAAAATCCATCAGACTGAGTTCCGTCTCGTCTGATATTTCAAGCTCCTCATCCAGCACGGAACCTCTCTCGCCGACATCTACATCTCTGGAGATTGAGCCACATGAAGAAATCCTCAAAACTTCCACAACTACAGTAGATGCTCCTTCATTCGAGACAGATTTATCCAGACGTGTCAAGCATTCCGAGATGTACACACTGTCTCCAATCTCATCAGATGAAGAYACTTCCCCATTGCTGTCTAGTCATCTTAGAGGAGACACAGACTCAGATAGCACTACCTCCACCGACACTGTTATTCACGTTGAGACCGCCACAGCTGGTAAAACCACAACCACTACTACTACTACCACACGTAGAATACAGTTACGGGGAGCAACCCAGAGTGAAGTAGATGGAGCTGGGGAGACGACTACAACGACAGTGATTAGTGAGACATACTTAGTTGACATGCCTGGGGAAGCAACTAAGAAGATAACATACCAATCAGGGACAGCACAGGATCTACCTATCGAGGACAAGTTATCTTCTGAGTGCGAGTCGATACTTGAAACTACAGAGGGCTTGGACAAATCTTTTAGCGTTATGGAAGATCAGAACAAGATTTTAGAAGATCAGTTGATGGAAGCAGCCATTGCCCTGTCGGATCTTGAACCACGTTTAAAAATGAGGCAATCTGGTGAAGATGTAAAGGAACTGATTGAAGAACGTGAGCAGCTTCAGTTTAAGGTAAACCAGGTCCTACTTACTGGCCGTAAGATGGTGTTGGATAGAGTCCTTGAAGTTGATAAAGAATCTATCTTAATTGAAAAACTGGATACACTGGAACGCAGACTGAAGCTGCTGATGCTGTGGCCTATCAGGGATATTAGAAGTTCTTCTAACTACAACAAGCTTCTGGATGACAAGCTCAAAGTAGTTGAGGCGGCTGTCTTTCACCTTGAACCCAAAGTCAAGAAATCAGTCATCACCAGAGATATTAAGGCGTTAGCAAAGGAGCGTGAAGATCTTGAATTCAAATCAATTGTAATAGTTGATCTCGGTCGTGACTTGATCAAGAACAAACAGATTGACGAGGACAAGGAGATGGTTTTCATCAAGAGAATGAATCAACTGGAGACAAAGATCAGGCTGATCATGATGTGGCCGATAAAAGAACTGAACAAACTGGCCTTCTCAAGTACTTCAAACTACAGCACATATTTGAAGCACAAGTTTGATGAAGCAGAATCAGCTATGACAAACATTGAGCCACGTATCAAGAAATCCTACATGAACAATGACAACACGGATTTGATTGAAGAAAGAAGTTATCTTTACCTGATGGTGCAAGGAGCTACAGGACTTGGTCACAGCATGATCGAACACAGGCTGCTTGACAGGAAGGAAAAGAAGGATTTCTTACAGCGAATGGAAAAGCTGGAGCAAAAATCAAACCTGCTGATGGCTTGGCCAATACGAATGAACAGAACTCCACTGGACAAATTTCTACTGAACAATTTGGAAGAGGCTGAATCTGCTATTGAAAACATTGAACCAAGAATTGAAAATGCTGATGTGTTCCATGACAATTCGGTAATTTTATCATAA

Transcript

Protein

Uniprot

Uniprot term	Description
P46939	Utrophin OS=Homo sapiens OX=9606 GN=UTRN PE=1 SV=2
G3V7L1	Utrophin OS=Rattus norvegicus OX=10116 GN=Utrn PE=1 SV=3
P11530	Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715	Domain	Calponin homology domain	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR052403	Family	LINC complex-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47535	MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005640	Cellular Component	nuclear outer membrane	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007097	Biological Process	nuclear migration	Interproscan
GO:0034993	Cellular Component	meiotic nuclear membrane microtubule tethering complex	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan