Detailed information of XP_031569578.1 in Actinia tenebrosa

Genomic Location: NW_022261599.1:67219...99455
NR annotation: XP_031569578.1, uncharacterized protein LOC116304064 isoform X1 [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q76NI1Kinase non-catalytic C-lobe domain-containing protein 1 OS=Homo sapiens OX=9606 GN=KNDC1 PE=1 SV=2
Q0KK55Kinase non-catalytic C-lobe domain-containing protein 1 OS=Mus musculus OX=10090 GN=Kndc1 PE=1 SV=2
G5EDB9Rap guanine nucleotide exchange factor OS=Caenorhabditis elegans OX=6239 GN=pxf-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004697 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00617
all species →
RasGEFRasGEF domainFamilyInterproscan
PF00618
all species →
RasGEF_NRasGEF N-terminal motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029899
all species →
FamilyKinase non-catalytic C-lobe domain-containing protein 1Interproscan
IPR001895
all species →
DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR036964
all species →
Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR000651
all species →
DomainRas-like guanine nucleotide exchange factor, N-terminalInterproscan
IPR023578
all species →
Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21560
all species →
VERY KIND PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264
all species →
Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0030425
all species →
Cellular ComponentdendriteInterproscan
GO:0032045
all species →
Cellular Componentguanyl-nucleotide exchange factor complexInterproscan
GO:0043025
all species →
Cellular Componentneuronal cell bodyInterproscan
GO:0048814
all species →
Biological Processregulation of dendrite morphogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_031569578.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_031569578.1 across 18 RNA-seq samples of Actinia tenebrosa. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

18Samples
0TPM > 0
6Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism 5 0 0.00 0.00
Tentacle 4 0 0.00 0.00
Mesentery 3 0 0.00 0.00
Acrorhagi 3 0 0.00 0.00
whole 2 0 0.00 0.00
whole organisim 1 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (ATENE_TPM, StringTie quantification over 18 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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