Genomic Location: NW_022261599.1:67219...99455
NR annotation: XP_031569578.1, uncharacterized protein LOC116304064 isoform X1 [Actinia tenebrosa]
Species Actinia tenebrosa · all data for this species · gene families
| CDS |
| XP_031569578.1 |
| Protein |
| XP_031569578.1 |
| UniProt accession | Description |
|---|---|
| Q76NI1 | Kinase non-catalytic C-lobe domain-containing protein 1 OS=Homo sapiens OX=9606 GN=KNDC1 PE=1 SV=2 |
| Q0KK55 | Kinase non-catalytic C-lobe domain-containing protein 1 OS=Mus musculus OX=10090 GN=Kndc1 PE=1 SV=2 |
| G5EDB9 | Rap guanine nucleotide exchange factor OS=Caenorhabditis elegans OX=6239 GN=pxf-1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004697 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00617 all species → | RasGEF | RasGEF domain | Family | Interproscan |
| PF00618 all species → | RasGEF_N | RasGEF N-terminal motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029899 all species → | Family | Kinase non-catalytic C-lobe domain-containing protein 1 | Interproscan |
| IPR001895 all species → | Domain | Ras guanine-nucleotide exchange factors catalytic domain | Interproscan |
| IPR036964 all species → | Homologous_superfamily | Ras guanine-nucleotide exchange factor, catalytic domain superfamily | Interproscan |
| IPR000651 all species → | Domain | Ras-like guanine nucleotide exchange factor, N-terminal | Interproscan |
| IPR023578 all species → | Homologous_superfamily | Ras guanine nucleotide exchange factor domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21560 all species → | VERY KIND PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005085 all species → | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
| GO:0007264 all species → | Biological Process | small GTPase-mediated signal transduction | Interproscan |
| GO:0030425 all species → | Cellular Component | dendrite | Interproscan |
| GO:0032045 all species → | Cellular Component | guanyl-nucleotide exchange factor complex | Interproscan |
| GO:0043025 all species → | Cellular Component | neuronal cell body | Interproscan |
| GO:0048814 all species → | Biological Process | regulation of dendrite morphogenesis | Interproscan |
XP_031569578.1.Transcript abundance of XP_031569578.1 across 18 RNA-seq samples of Actinia tenebrosa. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism | 5 | 0 | 0.00 | 0.00 | |
| Tentacle | 4 | 0 | 0.00 | 0.00 | |
| Mesentery | 3 | 0 | 0.00 | 0.00 | |
| Acrorhagi | 3 | 0 | 0.00 | 0.00 | |
| whole | 2 | 0 | 0.00 | 0.00 | |
| whole organisim | 1 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (ATENE_TPM,
StringTie quantification over 18 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.