Gene detail

Detailed information of XP_031571423.1 in Actinia tenebrosa

Genomic Location: NW_022261705.1:14182...35264
NR annotation: XP_031571423.1, dynein regulatory complex subunit 6-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031571423.1

ATGACTTCCTTGAGGTCTTGTGATCCAGAATTAAGAGAGTACTTGCTGGAACATCGTTTGCCAGACGTTTTTGAGGCAATCCTGACTGCCCTGGCCATCAACTGTCCTGACGATCCACATGATTTCATCATAGAGAAATTAAATATTCTTCTTACCGAGAAACRAGTGTTTGATGACCTGCGATGGGACACCTTTATAGAGAAAAAGCTAGCAAAAAGGAAATTTGCTTTAAGACGAAGAACTTTGGATTTTCTCTGGTCATATGAAGATGAAAATTCACAGCCTACTCCAGAGATGTATCAAAGAGCATATAACCTATACAATGGCAAGCTAAAGAATTCATGTTTCAAGGCTTGGTTGAAGTTCCATTACCACATGAAGAGGAAGAAAATGATCCTTACAAAAAAACTCAATGATGCTCGAACTTGGTATCGACTAAGAATACTGAAGATGAGACTCACAAAGTGGATYGAATGGGTTGCAATAAGAAAAGAAAGACAGCGAGCTATTTCAACAAGAATACAAAGGGTCGTAACCATATCTCTACTGCGGCTTGTTTTCAAGGCGTGGCAGGGGGTAGCTGCTGATGCAAGAAGAACAAAAGAATATTTTGAGAGAATAGAGAAAGGTGAAATCATTGATGGAGGAGAAGGAGGCTTCCTTGCTGTAAGTGCAGAAGGACCTAGTGACCAGATATCAACATTACCAAGGCATGTTGCACTTAGGGTATTCAGTTTCTTGAGCGTAAGTGATCTGGGACGTTGTTCRAGAGTTTGTCGTGCTTGGAAAATGATAGTACAGGCTAATATCTTATGGAGCAAGGTTGACATGTCCGAAGTCAAACACAGGGCTACCAATAAAGTTACATCCAAGCTTGTAATCAAGTGTAGACCATTTCTTGGTCACTTGAATCTCAGAGGCTGTTATCACCTCACCAAGGAGAGTTTGAGAATCATAAGTCAGTGCAGAAATTTGCAAGATCTTAATCTGTCTGATATCACTGGTGTTAYGGATGATGTGATGAAGGAAATAGCAATGGGATGTACCAGTCTTCTTTACCTTAATATAGCAAGTTGTCAGATATCAGATTCTACACTACGATACCTTGCAAGGTATTGTACCAATATGCAGTAGCATTAACGTCAGACTGTCGTACTCTTCGAGGAATTTCGATCCTTAATTCACCCTTCTTGTCTGATACGGCCTTCAAATGTCTGGCAACYTGTAGGCGAATGAACAGAATCCGTATAGAAGGAAATAATCGTATCACAGATGCATCGGTCAAAGTGCTGGCAAAGAGTTGTCCTTTGTTAGACCATGTGTACCTTGTAGACTGTCCTCGACTGACTGATCTGTCACTCAAAGCTTTAGCATGCTGTAAACACTTGCATGTCATTAATGTGGCTGACTGCGTAAGAGTACAAGACACTGGTGTACGTCAAATAGTGGAAGGACCKTCCGGATCCAAGATCAAGGAACTCAATCTAACAAACTGTGTTCGTGTTAGTGACGTCACGCTACTAAGAATTGCTCAAAGATGCCATGCACTGGTTTACGCAAGCTTCTGTTATTGTGAGCACGTGACCGATGCAGGAGTGGAATTACTCGGCACCCTCCCGTCCCTCATATCTCTCGATTTGTCAGGTTGTAATATTCAAGACCAAGGTGTGGCAGCTTTGGGGAATAACCCACAGTTTCGTGATATTATCTTATCAGAGTGCAGTAATATTACTGACCTAGGATTGCAGAAAATGTGCCAACAGTGTCGGATGCTGGAGAACTTCGACATTTCACACTGTAATCGCATCACAGACAACGCTATCAAGAATCTGGCCTTCTGCTGTCGTCTGCTGAGGACCCTCAACATCGCAGGCTGTACTCTGTTGACGGATTCTAGTCTTCAGTATTTATCTGGTGTTTGTCATTACCTCGAAAGCCTTGATCTGTCTGGATGTGTTCGCGTCTCGGATAAAGCTCTACGATATCTCAGGAAAGGATGTAGAAAACTGAATTCTCTGACCTTGCTCTACTGCAAAAATGTCACAAAATCTGCTGTACAGAAACTTCATGTCAAATGTGAAAATGTAATGCACAGCACAGAGGACCCGAGAGATATCATGAGTTATTCATGA

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q8CDU4	F-box and leucine-rich repeat protein 13 OS=Mus musculus OX=10090 GN=Fbxl13 PE=1 SV=2
Q8NEE6	F-box and leucine-rich repeat protein 13 OS=Homo sapiens OX=9606 GN=FBXL13 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937	F-box-like	F-box-like	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13318	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10279	FBXL13, DRC6; dynein regulatory complex subunit 6	-	Cilium and associated proteins	ko03037	deepkoala