Gene detail

Detailed information of XP_031572889.1 in Actinia tenebrosa

Genomic Location: NW_022261796.1:253...11248
NR annotation: XP_031572889.1, L-fucose kinase-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_031572889.1

GGTAACATAACTGTTGGCAATGGCTGTGTGGTGTCTGGAATTGGACCTGATGATTACAAGGTGAATGAAGCCTTGCAAATACCAGGTCTTCTTTGTCTCCTTGGTTACAACATCAGCTTTCCTCATGTCAACAATAAATACAACAAAGTGTTTGTAGTGTTCGGCATCAATGATAATCCAGAGAACCTTGTGTCGAATGAGGCCAGTGGAACATTTTGTAATAAAACCTGGAAAACGTTCTTTGAAAGGACTGGAATAAAATCAACTGATCTGTGGATGCATGGTCTGCCTGAAGAGAATAGAAACTTGTTCAATGCGCGTCTATTCCCAGTAGTTCATCACATTGGTAATGATAGCGATGATCCACCTCTCTATGACTGTTTGTGGTTGGCTGGTATCAATGTGAAGACCAGCAATGAAACCATGATTCAAAGGTGGTTTTCGTCGTTGCGGGTCTCTTTAAAGGAAATCCTCTCCAACATTGACCTTGGAGTAGAATTCTATGCGAGGAGACAGTTGTTCTTTGATATTGGACGGCGCCATGTTGAAGCTGCGTTGATGGGTGGGACCAATGAGTGCTTCCTGCCATTCCTGAAGACATGCGCAGTAGAAGGCTTCCATAAAGAGATCCTAGAGACAATGGACAATGTTGCGTCCAGTAGTGGGTCGTCTATGGGCGTGGCAGCACGTACCCTAGCCTGTATTGCAGATGTTCTCGGTGCAATGGCTGGAGAAAAAGCAGGACTTCGTAGCGGACCTGCGCAAAATGATGCATGGAAGCACGCGTTCCAACTGTTGGAGGACAAGAAAATCGAAGATGGTGTGAAGGCGTTGGCCCTGGAGAGATCCAAGTGGATGGACAGACCAGATTTGTTGATCAGAGCAGCGCGCCACTACGAAGGAGCCGAGCAGATCCTAAGAAGACACGCTGTCATGACAGCCAAACAGTTTATGAAGTTTGAAAAGACTGACATTCCTCCCATGGACCGCTGGGTAATCGCCGAAGCGCCAGTTCGAATCGACTTCAGTGGTGGATGGACAGACACGCCTCCTATTGCATACGAACACGGTGGAGTAGTTACGAACGTCGCCATCAAGCTGGACGGCAAGAAACCACTGCAAGTAAAAGCCAAAAGAATTCATAAGTTTCAGATAATTCTAGTTATTCTAGCCGGAAAACACAGTGTTCGCGTTGTATGTGAAAAGTTAGAAGACTTGGCAGATTACTCGCAACCTCATGCTCCAGGTGCCTTGATCAAAGCCTGCTTTTGTGCAGCAAATATAGTCGTCCTAGATTCTCCAAAGTCACTCGCTGACCAGCTCAAAGAGCGATACGGCGGCGGCTTCGAGGTACATTCCTCCGCTGACGTTCCTTACGGAAGTGGACTGGGCACGAGCAGTATTTTAGCAGGCGTTGTCATGGGAGCCGTGTTGCGAGCCTCTGGACTCACTGCAGATGTCACATCTCTGATCCATGCTGTAATGGTGGTGGAGCAAATGTTGACCTGTGGGGGTGGGTGGCAGGATAACGTTGGTGGTCTTGCTCCAGGATTCAAGATTGCTAGCTCCAAAGCTTCGCTACCTATCGAAGTAGAGTACGAAGTGCTGAGTGTGTCCGATTCGATGGTTGATCAACTGAACAAATGTCTGGTTTTTGTTTACACTGGGAAGACAAGATTGGCCAAGAACCTCTTGCAGGTGAAAGAAGACTTAGAACCTAATGACATCAAAGAAGAGCGCCTTGTTATTCATTCTTTCAATCAGAATGTGGTTCGTAATTGGTACGGCAGACAGCCAAACATAGTCAAAGTCGTAGATGATCTGGCTGATAATGCTAAAACACTAGCCAAAGCACTAGTAGATGGGGATCTAACCCTATTTGGACAGTGTGTCAGTAATTACAGAGAACACAAGAAACTCATCGCACCAGGAACCGAACCAGAGGATATACGTAGAATGATGGAAGACATTCAACCTTATGCCTACGGCCAGTGTCTCGCAGGAGCAGGTGGTGGTGGGTTTCTGTGCGTGATTGCAAAGTCTCCTGAAATGCGCCAGAAAATCGAAGAAACTTTAGGAAACACAAAGTTTTCAGATGAAGTTGCCTTCCACGAAGTTTCTATCGATAACGAAGGTCTCACAATCAGAATTGAATAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q7TMC8	L-fucose kinase OS=Mus musculus OX=10090 GN=Fcsk PE=1 SV=1
Q8N0W3	L-fucose kinase OS=Homo sapiens OX=9606 GN=FCSK PE=1 SV=2
Q9LNJ9	Bifunctional fucokinase/GDP-fucose pyrophosphorylase OS=Arabidopsis thaliana OX=3702 GN=FKGP PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08544	GHMP_kinases_C	GHMP kinases C terminal	Family	Interproscan
PF07959	Fucokinase	L-fucokinase	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013750	Domain	GHMP kinase, C-terminal domain	Interproscan
IPR052203	Family	GHMP Kinase-Related Enzymes	Interproscan
IPR012887	Domain	L-fucokinase	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR011004	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan
IPR036554	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32463	L-FUCOSE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0042352	Biological Process	GDP-L-fucose salvage	Interproscan
GO:0050201	Molecular Function	fucokinase activity	Interproscan
GO:0016772	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan