Genomic Location: NW_022261815.1:201423...226946
NR annotation: XP_031573125.1, nephrocystin-3-like isoform X2 [Actinia tenebrosa]
| CDS | |||||
| XP_031573125.1 | |||||
| Transcript |
| - |
| Protein |
| XP_031573125.1 |
| Uniprot term | Description |
|---|---|
| P0CI65 | Nephrocystin-3 OS=Danio rerio OX=7955 GN=nphp3 PE=3 SV=1 |
| Q6AZT7 | Nephrocystin-3 OS=Xenopus laevis OX=8355 GN=nphp3 PE=2 SV=1 |
| A0JM23 | Nephrocystin-3 OS=Xenopus tropicalis OX=8364 GN=nphp3 PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13374 | TPR_10 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051787 | Family | Effector and Ciliary Development-Associated Protein | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR006597 | Repeat | Sel1-like repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45641 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19360 | NPHP3; nephrocystin-3 | - | Cilium and associated proteins | ko03037 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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