Gene detail

Detailed information of XP_031573206.1 in Actinia tenebrosa

Genomic Location: NW_022261823.1:43838...46853
NR annotation: XP_031573206.1, TNF receptor-associated factor 5-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q810I1	E3 ubiquitin-protein ligase TRIM50 OS=Rattus norvegicus OX=10116 GN=Trim50 PE=2 SV=1
Q810I2	E3 ubiquitin-protein ligase TRIM50 OS=Mus musculus OX=10090 GN=Trim50 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR003613	Domain	U-box domain	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan