Gene detail

Detailed information of XP_032218255.2 in Nematostella vectensis

Genomic Location: NC_064035.1:6035298...6048084
NR annotation: XP_032218255.2, programmed cell death 6-interacting protein [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5517870

ATGGCGGGTTGGATTGTTATTCCCTGCAAGAGATCTGAGGCAGTCGATTTTAAAAAGCCTCTGGAAAAGTTTATCAAGAATACGTTTTCAGAAGATGTTCTGAAGGAGAACTCGGATGCCATTTCTGATTTGAACAAACTTCGTAATTCGGCGGTTATGCAAACGCCTGACAAACATGAGTCCGCCTTGGAGCCTCTTCTCCGTTATTATGACCAACTTGTGGCTATTGAGGGGAAGCTACCAATAAACGAATCCCAGATACGGGTCTCATTTACATGGTTTGACTGTTTCGATAAGGGCTCTCTGTTTGGTTATAAAAAAGCAAGCCTTGCAACAAGTGCATATGAACGTCTTTGCCTTCTTTTCAATATTGGTGCCCTTGAAAGCCAGATTGCTAGCGCTCAAAATTTACAGACAGATGATGGATTAAAGCTGGCAGCAAAAATGTTTCAGAGTGCTAGTGGCTGTTTCAACCTGTTAAAGGATTCAGTCTATGCCCAGCTTCACCAAGTCCCTACACCAGACATGTCTGTCGAGATGTTGAATGCCCTTGGCTCAATCATGCTGGCTCAAGGGCAGGAGAGTATCTGGTTTAAAACTGAGCATGACAAAATGAAAGATGGTATAATTGCAAAGGTTGCAGCACAACTTTCCGATTTCTACAATGAAGCCAACCAAGCATGTCAGGTCCAGACAGTTAAGCAACAGTTGGAAAAGGAGTGGACGGCAGTTCTTGGAGCCAAGCAAAAGTACTTTAAGGCCATATCTCAATACCATCAAGCCACTGTTGCCATGGAAAAGGGAAAATATGGAGAAAATGTTGCTAGACTTAAGTTGGCAAATCAGTTAGTTGGTGAAGCAGCCAAAGAAAGCATGGGGATGTTTGACACAAAGACCTGGGTGGACCGCATCAAGCGAGGATTTGTTGAGGCAGAAAAGGATAACAACTTAATCTACCATGACATGATTCCTAGTGTTGACACTCTAGCCGTGATTGGCCGTGCATCTCTGGCCAAGTCCCTGCCCCTATCAAAGCCAGCTTCAATCAACTTCATAGACATGTTCACCAAGCTGGTACCAATGGCGGTCCATGGAGCACTGACTGCATACGAGAACCGTAAGGCTGAGATTATCAACTTTGAAGTTGGGCGGTTAAGAGAGGGGACACAACTAATCAACAGCATCTTGGCATCACTAAACTTGCCAGCAGCAATAGAAGACCTATCAGGGGACAAGGTGCCCAAGTCAGTTCTGGAGAAGGCTGCCACTGTGAAGGAGAGGGGAGGTGTGAACACTATAGACTCGCTGATGCAAGATCTCCCGGAGCTATTGCAGCGCAACCGTGAAATTCTTGATGAGGCTGCGAGGATGATGGACGAAGAAGAAGGCCAAGACACTCAAATGCGTGAACGCTTTACAAGCAAATGGACGCCAAAGCCGTCTGCCGAGCTCACGGCCCAGCTCCGGGACGAAGCCAACAAGTACCGTGGTATCCTTGAGAATGCAGTTCGCGCTGATGCCATCGTGCGAGAGAAGTACAATGCACACAGGCAAGCGATGGACCTGCTCTGCAAAGGCGAGTCAGAGATTGCTGCAGCCCTTCCAACAGTCAATGCATCCTCTTCAGCCACAGCGGCTAGCTCCACGGTCCAACAGTTGCGAAAGCTCCTGTCTGAGATTGACAGCATCAAGGCGGCTCGTGAAGGGATCGAGGAGGACCTCAAGGCTCAGCAGGACGACATGGCGGTCAAGTTCCTGAGCGCCCTGGCTGCTGACGGAAGCATCACGGACTGTGAAGGTCTCATTAGCGGAAACCTGGCCAGCACATATGAGCCAATCCAAGACCAGGTCAAAGACAGCATTTCCAGACAGGAAAAGACTTTAGCCGCAATACAGACGGCAAACGAGAAGTTCGTCCAAGAAAGGCAGGAGGGAAGGGCGGTCAGTGAGAGGGAGGCAAAGTTGAAGGAGCTCGCATCAGCTTTCGATATTTACATGGAGCTAACAGCCAACTTGAAGGAGGGAACCAAGTTCTACAACGACCTTACTCCAATCTTGGTCAGATTTCAGCAGAAAATCAGCGATCTAGTATTTGCCAGGAAGACTGAAAGAGAGGAGTTATCAAGGAGTTTACAGAATACCATAGCTCAGCAGCCAGCTGAGCCCACCCCCGCCGCACCACCACACCACGCCGCACAAGGCGCACGCCAGCCACCTCCGTCTCGCCCTCCACCGCCTCGCTCCCAGGCCCCGTCAGCCCCCTCCTCGGCTCCAGCCCAGTACCCTGGCGGAGCTCCTCCTGCGTACGCCACCGCGGGGCAGTACTACCAACCGATGCCGATGCCCGGCTATGCACCCTACCAGTACAGCAACTACACCCAGCCCGGCGGCATGGGGGGATATGGGGGTTACCCGCAGCAGCCACCCCTGCCTGGTGGGTACTACTATGGGGCCCCGCCTGGGGGGTACCCTTACCCCCAACAGCCAGGACAACCAAGACCCGGCGGGCCAGGCCCATATGGACAGTAA

Transcript

rna-XM_032362364.2

atagAAACTTTGTATTCCTTCCGATTGAACCTTCTTCAGCCAAACGGAATTCTGGAAGAAGGCCTAAAATCCGCTTCGAAATGGCGGGTTGGATTGTTATTCCCTGCAAGAGATCTGAGGCAGTCGATTTTAAAAAGCCTCTGGAAAAGTTTATCAAGAATACGTTTTCAGAAGATGTTCTGAAGGAGAACTCGGATGCCATTTCTGATTTGAACAAACTTCGTAATTCGGCGGTTATGCAAACGCCTGACAAACATGAGTCCGCCTTGGAGCCTCTTCTCCGTTATTATGACCAACTTGTGGCTATTGAGGGGAAGCTACCAATAAACGAATCCCAGATACGGGTCTCATTTACATGGTTTGACTGTTTCGATAAGGGCTCTCTGTTTGGTTATAAAAAAGCAAGCCTTGCAACAAGTGCATATGAACGTCTTTGCCTTCTTTTCAATATTGGTGCCCTTGAAAGCCAGATTGCTAGCGCTCAAAATTTACAGACAGATGATGGATTAAAGCTGGCAGCAAAAATGTTTCAGAGTGCTAGTGGCTGTTTCAACCTGTTAAAGGATTCAGTCTATGCCCAGCTTCACCAAGTCCCTACACCAGACATGTCTGTCGAGATGTTGAATGCCCTTGGCTCAATCATGCTGGCTCAAGGGCAGGAGAGTATCTGGTTTAAAACTGAGCATGACAAAATGAAAGATGGTATAATTGCAAAGGTTGCAGCACAACTTTCCGATTTCTACAATGAAGCCAACCAAGCATGTCAGGTCCAGACAGTTAAGCAACAGTTGGAAAAGGAGTGGACGGCAGTTCTTGGAGCCAAGCAAAAGTACTTTAAGGCCATATCTCAATACCATCAAGCCACTGTTGCCATGGAAAAGGGAAAATATGGAGAAAATGTTGCTAGACTTAAGTTGGCAAATCAGTTAGTTGGTGAAGCAGCCAAAGAAAGCATGGGGATGTTTGACACAAAGACCTGGGTGGACCGCATCAAGCGAGGATTTGTTGAGGCAGAAAAGGATAACAACTTAATCTACCATGACATGATTCCTAGTGTTGACACTCTAGCCGTGATTGGCCGTGCATCTCTGGCCAAGTCCCTGCCCCTATCAAAGCCAGCTTCAATCAACTTCATAGACATGTTCACCAAGCTGGTACCAATGGCGGTCCATGGAGCACTGACTGCATACGAGAACCGTAAGGCTGAGATTATCAACTTTGAAGTTGGGCGGTTAAGAGAGGGGACACAACTAATCAACAGCATCTTGGCATCACTAAACTTGCCAGCAGCAATAGAAGACCTATCAGGGGACAAGGTGCCCAAGTCAGTTCTGGAGAAGGCTGCCACTGTGAAGGAGAGGGGAGGTGTGAACACTATAGACTCGCTGATGCAAGATCTCCCGGAGCTATTGCAGCGCAACCGTGAAATTCTTGATGAGGCTGCGAGGATGATGGACGAAGAAGAAGGCCAAGACACTCAAATGCGTGAACGCTTTACAAGCAAATGGACGCCAAAGCCGTCTGCCGAGCTCACGGCCCAGCTCCGGGACGAAGCCAACAAGTACCGTGGTATCCTTGAGAATGCAGTTCGCGCTGATGCCATCGTGCGAGAGAAGTACAATGCACACAGGCAAGCGATGGACCTGCTCTGCAAAGGCGAGTCAGAGATTGCTGCAGCCCTTCCAACAGTCAATGCATCCTCTTCAGCCACAGCGGCTAGCTCCACGGTCCAACAGTTGCGAAAGCTCCTGTCTGAGATTGACAGCATCAAGGCGGCTCGTGAAGGGATCGAGGAGGACCTCAAGGCTCAGCAGGACGACATGGCGGTCAAGTTCCTGAGCGCCCTGGCTGCTGACGGAAGCATCACGGACTGTGAAGGTCTCATTAGCGGAAACCTGGCCAGCACATATGAGCCAATCCAAGACCAGGTCAAAGACAGCATTTCCAGACAGGAAAAGACTTTAGCCGCAATACAGACGGCAAACGAGAAGTTCGTCCAAGAAAGGCAGGAGGGAAGGGCGGTCAGTGAGAGGGAGGCAAAGTTGAAGGAGCTCGCATCAGCTTTCGATATTTACATGGAGCTAACAGCCAACTTGAAGGAGGGAACCAAGTTCTACAACGACCTTACTCCAATCTTGGTCAGATTTCAGCAGAAAATCAGCGATCTAGTATTTGCCAGGAAGACTGAAAGAGAGGAGTTATCAAGGAGTTTACAGAATACCATAGCTCAGCAGCCAGCTGAGCCCACCCCCGCCGCACCACCACACCACGCCGCACAAGGCGCACGCCAGCCACCTCCGTCTCGCCCTCCACCGCCTCGCTCCCAGGCCCCGTCAGCCCCCTCCTCGGCTCCAGCCCAGTACCCTGGCGGAGCTCCTCCTGCGTACGCCACCGCGGGGCAGTACTACCAACCGATGCCGATGCCCGGCTATGCACCCTACCAGTACAGCAACTACACCCAGCCCGGCGGCATGGGGGGATATGGGGGTTACCCGCAGCAGCCACCCCTGCCTGGTGGGTACTACTATGGGGCCCCGCCTGGGGGGTACCCTTACCCCCAACAGCCAGGACAACCAAGACCCGGCGGGCCAGGCCCATATGGACAGTAATATGCCCGGAATACACTCGCCCGTGAGAATTAACAGGCTTCACTATGGACTTAACTCGTTACCTCTACCCCCCAACAGCCAGGACAACCAAGACCCGGCGGGCCAGGCCCCTATGAACAGTAATATGCCCGGAGTAATCAGCCATGAATACTTACAGTCTATTAATATGGACTCAATAACCCGCCGAATAACTCATCCCTCGACCGCCAGGACTGCCAAGAACCGGCGGGAAACTCAGTCTTGAGCATTGACAGGCTAGACTATAGATTTAAACTTCGTACCATAAGTGACGTGCAATACATCATTAAAagatcagggccgtagcaggggttgAGCactggggcacgtgcccccccccccccccccccccccaaaaaaaaaatattttcaaaatacttgatgttctgtattgtgctcccccccccccccccctccaatatttcgatgtctgctacggcactgaaGATTGAAgaattaaagtaaaaaaattaagcGAAAACAAAGTTAATTAAGGTGGTTCCCATTTTCACAACTTGAGTGTCTTTGTAATACAATTATTGGACTATAAACGTTTAGCCGTGGGTCAGATATGAATTTTATGTGACGGAACGTGCAAATACAGACGTCGGTAAGTTGCAAATATATACCCTAGATGTTGGTCATTTTTGTAGAAAAGATGTTCCTAATTTGAAATTAATAATTGATTTTCAAGGTCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WUM4	Programmed cell death 6-interacting protein OS=Homo sapiens OX=9606 GN=PDCD6IP PE=1 SV=1
Q9W6C5	Programmed cell death 6-interacting protein OS=Xenopus laevis OX=8355 GN=pdcd6ip PE=1 SV=1
Q9WU78	Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004844 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03097 all species →	BRO1	BRO1-like domain	Repeat	Interproscan
PF13949 all species →	ALIX_LYPXL_bnd	ALIX V-shaped domain binding to HIV	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004328 all species →	Domain	BRO1 domain	Interproscan
IPR038499 all species →	Homologous_superfamily	BRO1 domain superfamily	Interproscan
IPR025304 all species →	Domain	ALIX V-shaped domain	Interproscan
IPR045251 all species →	Family	Vacuolar protein-sorting protein Bro1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23030 all species →	PCD6 INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000281 all species →	Biological Process	mitotic cytokinesis	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0071985 all species →	Biological Process	multivesicular body sorting pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12200	PDCD6IP, ALIX, RIM20; programmed cell death 6-interacting protein	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032218255.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

16Conditions

63.1Max TPM

39.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	38.07	45.94
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	25.29	36.52
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	34.33	43.95
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	51.43	61.59
whole 6 week old aboral regenerate · regenerate uncut	3	3	29.14	33.88
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	57.24	62.87
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	37.76	41.85
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	38.29	41.91
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	36.55	47.29
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	41.59	46.37
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	37.17	45.40
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	46.47	63.09
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	33.68	36.74
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	39.80	47.93
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	37.18	39.96
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	39.94	56.17

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	45.94
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	38.31
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	29.96
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	36.52
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	22.08
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	17.27
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	43.95
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	30.12
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	28.92
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	61.59
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	52.36
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	40.34
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	33.88
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	30.02
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	23.51
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	62.87
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	57.52
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	51.33
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	41.85
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	40.64
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	30.78
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	41.91
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	39.13
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	33.83
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	47.29
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	35.68
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	26.69
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	46.37
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	41.14
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	37.27
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	45.40
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	33.50
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	32.61
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	63.09
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	40.25
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	36.07
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	36.74
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	34.31
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	30.01
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	47.93
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	39.05
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	32.42
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	39.96
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	39.81
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	31.78
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	56.17
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	40.60
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	23.03

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.