Gene detail

Detailed information of XP_032219478.2 in Nematostella vectensis

Genomic Location: NC_064047.1:1694157...1709712
NR annotation: XP_032219478.2, ralBP1-associated Eps domain-containing protein 1 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC116602257

ATGTCAAGAAAGCATAGCACACTGCTGAAAGAAGAGGTGGATGATGATGAATCTAATGGTGATGACAAGAGCAAGAGAGAAAGCACACAAGAAGGTGATAAAAGGAGAAAAGGAAAGAAAGGTGAACGCCTTGAAGGCTATTACAACAGTAGTATGAACAACTCTAAGGTTAAACCTGTCGTGGGTGCAGCTATCAACCCTTCAGCGGATGGCATAACTTCACCTAACCACACCCAGCCCACCCAGGTCCTGCCCACTATCCAGCCCCCGCCCACCCACCCGTATCGGCAGCAAGGCCCTGCAGGGCCACCGGTGACATGTCAAGCCCAACAGGGGTCTACAGCGCAGCAGGTTACACCTCAAGGCCAGCAGGGTTACAGTGGCGTGGTCATGCCTGTAGCAATAAACCAGCCTATTCAACAGGTCTACCAGCCAAACCATCCTCAGCACATTCCGCCGCAAAACCCAGTGGCAACTCACTGGCAGCAACAGCAACCACTGCCTGTAAGGCTACCGCCCCCTCCTGGCCCCGCCCAACACCCAGTAGTGGCACCCCAACAGTATCAAGCCACCCCACAACACCCTCAAGCCCAGTATCAACCCTACCAGCCCCACCCACCACAGGGGTACTTTCCAGGCGTGCATTACACTCATGGAGTCCCAGGCCAGGTCCCTGGTGCTATAGGTGCACCGTACATACATCAGCCAAGACATCCCCAGCATGTCCTAGTGCGCAGCCAGTCACTCCCAGAAGAGCCTGTCCCCCAAGGGCGGGGCCCACCCCCTGCACCCCAGAGTCCCCCAGGGCGGGGCCCACCCCAGGACCAGCAGATGTGGGTAGCACATCAGCCGCCACCACAGCCACAAGACCAAGTTGAAGCAGGTAACTGGGTTGGTGAAAGTAATGGTGCTGCGTCCCAGCAGACCTGGGTACCGGGTAGTACTGCCACCCAACACCCCATGGAGAGCTACTGGGCAGCATTTAGTGGCAGCCCCCCAACCCCTGAGAAACCCCAACAATGGGACGACTCATCAGACCACTCTGATCACAGCTCAAGTGATGAGGAACTGGACCGAAGCAGCTCACCTGTGCTGTGCGGTGAAGAGGGGGAGGGGCTTTTAAGGGCACCGTCGCTGACCAGTTTTGCTGAAAGCACAAGCAGTGTGGAAGATGAGGGAGAAGAAGATGTGTGGGTGATCCAGCATGAGCAAAGAGATTACTACGCTACACAATTTAGAAAACTACAGCCTGGGGAAGATGGAGTCATCAAAGGTCCTAAAGCAAGAGATTTCTTCTTGAAATCTAACTTGCCGACCGAAACTTTATCCAAGATATGGCACCTTTCAGATATCAATAAAGACAATGCACTTCACCTGGAGGAGTTTTGTATAGCAATGCATCTGGTAGTTGCTATAAGACATGGGCTGGACCTGCCCCCAACACTACCCCCAACGTTACTGAACTTTAGGGCCAGCGAGGAAGAGGAAGATCCATTCAATGTTTCCATGACAGCAGCCCCAACGTCACCAAGGCAAAAAGAGAACAGTGTTGGGGAACACATAGAGGCTTCAATTGAGGAACAGTCTCACTCCCCTCGTTCAGCCTCACTCAAAAGGGAACACAACCGACGGCAAGATTTATCTCGGCCGCGCTCCCTCTCAGACCCAAACTACACAGAGGAGCCTCATGACCATTCAAGGAAAATCTCCAGCCCCGTCCCACCAACCTCTGGTACAACTCAACCGGAGGGTGCTTCAGCAATAGTCCCACCTCTTCCGCTAAGCCCCGGTCCACACATAGGCATAGAGAGACCAAGAGCATCAGCAAAGATCTCCCTCCTGGATAGTGCACCAGGCCAGCTGCTGCCACCACCGTCTGGGAAGTTTGCGCGTGAGGCCATCAAAGAGTCAGACTCAGACTCTGATACCTCTGACAGCTCACCCCCAACATCACCCACACAACAGAGCCCTCTTGAGACCACGCCTGTTTTGCCGCTACCAGAGAAAGTCACCCCAGAGCCTGGTACAACAACACCACCCTCGCCGCCTCCTGACTCCCCGAAGAGTGTGGCACCTCCTGCGCTAAGGTCCACTGCAGAGAAGGTGGTCATGAGACAACAACGCAAGAGTGGAGAGAGACCACGATCAGCTGGTGATGTCAATCATATTGTCCCAATGGATGATAGCACCCCTGGGTCGACCACGCCTAGTGATGGTAGCCAGGGGTCCCACGGCCAGAAGGACCCACCTCCACCACCTCCTCCCAGGAACAAGAGGGGTCACTCTAGGTCCTCATCACTTGACCTCAATAAGCTATTTGCTGCTAAAGCCAAGGAGGCGAAGGAGAACAGAGCTGCAAGCACATCCTCTCCAACGTCCAGTCACTCGAGCCAGAACAGTGAGACAGTACTTGCTGAAAGACCCGACACCTCACAGAAACATGAACCCAAAGGGGGGGCATCCGAGGAGACCCCACGCTCACCAGTACAGGCATCAGAAGAGCAGAATTTTGCCGATTTTAGCCGATTTGATAGTTTTGTTAACGCTCAGTCCAGCGATGGCACGTCTTCTGGTCAGAGCATGGTGAGATCTCACCGGCGGTCACAGTCACTTGATCAGAATCTGGATTTCATACCCAAGCAACCAAGGAAAAACACTTTCGAAGGGAGCACTTCCCCTCGCGGAAACCAAGAAGCTTTACCTCGCCCTGTGCCCAGAGTGAAACCAGCAAGCCCACCTCCTGTTAAGCTGACAATTCGAAGACCTGATCGCAGCAGTGAAAAAGACAAAGAGAAAGAGAGAAAGCTCAACACAGAACCCCCAAAAGTCGTCGTCAAGCCTCTAACGAAGGAGAGCAAGCTCCAAACGTCGATTCGTGACCTAAAGGAGAAGAACCTGGCTCTGTCACGGCTAAACAGCGAGCTGCAGCAAGAGGTTAAACAAGTTATGGAATGGAGGATAGCTCTAGAGCTGAAGCTTGAACGCCTCAAGCCATTCAACCCCAAATAA

Transcript

rna-XM_032363587.2

CTCCCGAGTTAAAAAAATGACCTTTTTACCACTTCCGGTATTCAATCTCGCTCCAGACCTCCTCGCGGAAATCCCGCTGGTGAACACGTGACCACACATCAACATGGCTGCTTGTCGGCTCATTCGCGATGGGAGCTAGGTGCAGAGAAAATCTACTAGTTTCCTACAAAAATGACATTTAATTCACCTCCAATTTTACACACAGCAAGATGAATTCAGGATATACAATAGACGCATTTCCTGTGCATTTTCAATGCGTCATACGACCTCAGAGTAACCAAAGATTGTGTTAACTAGAAGAGGATAACATTTCATCTGATTTTAAACTCTATCGCCGATACATTTGGGTACTGCGTGTAGAAGTTTCACTTCATCTTCATAACTGCATAATTACAGAACATTGACAAGTATTTCATCACTGATACCATGTCAAGAAAGCATAGCACACTGCTGAAAGAAGAggtggatgatgatgaatcTAATGGTGATGACAAGAGCAAGAGAGAAAGCACACAAGAAGGTGATAAAAggagaaaaggaaagaaaggTGAACGCCTTGAAGGCTATTACAACAGTAGTATGAACAACTCTAAGGTTAAACCTGTCGTGGGTGCAGCTATCAACCCTTCAGCGGATGGCATAACTTCACCTAACCACACCCAGCCCACCCAGGTCCTGCCCACTATCCAGCCCCCGCCCACCCACCCGTATCGGCAGCAAGGCCCTGCAGGGCCACCGGTGACATGTCAAGCCCAACAGGGGTCTACAGCGCAGCAGGTTACACCTCAAGGCCAGCAGGGTTACAGTGGCGTGGTCATGCCTGTAGCAATAAACCAGCCTATTCAACAGGTCTACCAGCCAAACCATCCTCAGCACATTCCGCCGCAAAACCCAGTGGCAACTCACTGGCAGCAACAGCAACCACTGCCTGTAAGGCTACCGCCCCCTCCTGGCCCCGCCCAACACCCAGTAGTGGCACCCCAACAGTATCAAGCCACCCCACAACACCCTCAAGCCCAGTATCAACCCTACCAGCCCCACCCACCACAGGGGTACTTTCCAGGCGTGCATTACACTCATGGAGTCCCAGGCCAGGTCCCTGGTGCTATAGGTGCACCGTACATACATCAGCCAAGACATCCCCAGCATGTCCTAGTGCGCAGCCAGTCACTCCCAGAAGAGCCTGTCCCCCAAGGGCGGGgcccaccccctgcaccccagAGTCCCCCAGGGCGGGGCCCACCCCAGGACCAGCAGATGTGGGTAGCACATCAGCCGCCACCacagccacaagaccaagttGAAGCAGGTAACTGGGTTGGTGAAAGTAATGGTGCTGCGTCCCAGCAGACCTGGGTACCGGGTAGTACTGCCACCCAACACCCCATGGAGAGCTACTGGGCAGCATTTAGTGGCAGCCCCCCAACCCCTGAGAAACCCCAACAATGGGACGACTCATCAGACCACTCTGATCACAGCTCAAGTGATGAGGAACTGGACCGAAGCAGCTCACCTGTGCTGTGCGGtgaagagggggaggggcttttAAGGGCACCGTCGCTGACCAGTTTTGCTGAAAGCACAAGCAGTGTGGAAGATGAGGGAGAAGAAGATGTGTGGGTGATCCAGCATGAGCAAAGAGATTACTACGCTACACAATTTAGAAAACTACAGCCTGGGGAAGATGGAGTCATCAAAGGTCCTAAAGCAAGAGATTTCTTCTTGAAATCTAACTTGCCGACCGAAACTTTATCCAAGATATGGCACCTTTCAGATATCAATAAAGACAATGCACTTCACCTGGAGGAGTTTTGTATAGCAATGCATCTGGTAGTTGCTATAAGACATGGGCTGGACCTGCCCCCAACACTACCCCCAACGTTACTGAACTTTAGGGCCAGCGAGGAAGAGGAAGATCCATTCAATGTTTCCATGACAGCAGCCCCAACGTCACCAAGGCAAAAAGAGAACAGTGTTGGGGAACACATAGAGGCTTCAATTGAGGAACAGTCTCACTCCCCTCGTTCAGCCTCACTCAAAAGGGAACACAACCGACGGCAAGATTTATCTCGGCCGCGCTCCCTCTCAGACCCAAACTACACAGAGGAGCCTCATGACCATTCAAGGAAAATCTCCAGCCCCGTCCCACCAACCTCTGGTACAACTCAACCGGAGGGTGCTTCAGCAATAGTCCCACCTCTTCCGCTAAGCCCCGGTCCACACATAGGCATAGAGAGACCAAGAGCATCAGCAAAGATCTCCCTCCTGGATAGTGCACCAGGCCAGCTGCTGCCACCACCGTCTGGGAAGTTTGCGCGTGAGGCCATCAAAGAGTCAGACTCAGACTCTGATACCTCTGACAGCTCACCCCCAACATCACCCACACAACAGAGCCCTCTTGAGACCACGCCTGTTTTGCCGCTACCAGAGAAAGTCACCCCAGAGCCTGGTACAACAACACCACCCTCGCCGCCTCCTGACTCCCCGAAGAGTGTGGCACCTCCTGCGCTAAGGTCCACTGCAGAGAAGGTGGTCATGAGACAACAACGCAAGAGTGGAGAGAGACCACGATCAGCTGGTGATGTCAATCATATTGTCCCAATGGATGATAGCACCCCTGGGTCGACCACGCCTAGTGATGGTAGCCAGGGGTCCCACGGCCAGAAGGACCCACCTCCACCACCTCCTCCCAGGAACAAGAGGGGTCACTCTAGGTCCTCATCACTTGACCTCAATAAGCTATTTGCTGCTAAAGCCAAGGAGGCGAAGGAGAACAGAGCTGCAAGCACATCCTCTCCAACGTCCAGTCACTCGAGCCAGAACAGTGAGACAGTACTTGCTGAAAGACCCGACACCTCACAGAAACATGAACCCAAAGGGGGGGCATCCGAGGAGACCCCACGCTCACCAGTACAGGCATCAGAAGAGCAGAATTTTGCCGATTTTAGCCGATTTGATAGTTTTGTTAACGCTCAGTCCAGCGATGGCACGTCTTCTGGTCAGAGCATGGTGAGATCTCACCGGCGGTCACAGTCACTTGATCAGAATCTGGATTTCATACCCAAGCAACCAAGGAAAAACACTTTCGAAGGGAGCACTTCCCCTCGCGGAAACCAAGAAGCTTTACCTCGCCCTGTGCCCAGAGTGAAACCAGCAAGCCCACCTCCTGTTAAGCTGACAATTCGAAGACCTGATCGCAGCAGTGAAAAAGacaaagagaaagagagaaagCTCAACACAGAACCCCCAAAAGTCGTCGTCAAGCCTCTAACGAAGGAGAGCAAGCTCCAAACGTCGATTCGTGACCTAAAGGAGAAGAACCTGGCTCTGTCACGGCTAAACAGCGAGCTGCAGCAAGAGGTTAAACAAGTTATGGAATGGAGGATAGCTCTAGAGCTGAAGCTTGAACGCCTCAAGCCATTCAACCCCAAATAAGCACCGGCAAGCACTCACATAAACCCGGGTGTTTTGCGGGCTTGCTGTGGTATCTTCCAGAGCTTACCCGAGGGGATCAGTTACCATGGAGACAAGGAGCAGCTATTCTTAACTGCGTCTTGTTGCCGTATCGTAAATACAGATAAAACATATAGATATAGTACATACAAGTAATTTTTAAGGTGAGCAAAGCCGAACGGCAATTTATAGTGGGTAAGAGTTTGCCTAAAAATTAAATActagaaaaataaagacaGCATTTACAGAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12763	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR000261	Domain	EH domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11216	EH DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006897	Biological Process	endocytosis	Interproscan
GO:0016197	Biological Process	endosomal transport	Interproscan
GO:0042734	Cellular Component	presynaptic membrane	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan
GO:0097708	Cellular Component	intracellular vesicle	Interproscan
GO:0150007	Biological Process	clathrin-dependent synaptic vesicle endocytosis	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20068	REPS; RalBP1-associated Eps domain-containing protein	-	Membrane trafficking	ko04131	deepkoala