Genomic Location: NC_064046.1:11979602...11989836
NR annotation: XP_001639420.1, collagen alpha-3(IV) chain isoform X1 [Nematostella vectensis]
| CDS |
| LOC5519454 |
| Transcript |
| rna-XM_032364282.2 |
| Protein |
| XP_032220173.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02140 | Gal_Lectin | Galactose binding lectin domain | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000922 | Domain | D-galactoside/L-rhamnose binding SUEL lectin domain | Interproscan |
| IPR050632 | Family | Nematode Cuticular Collagen | Interproscan |
| IPR043159 | Homologous_superfamily | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24637 | COLLAGEN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01047 | PLA2G, SPLA2; secretory phospholipase A2 | EC:3.1.1.4 | Chromosome and associated proteins | ko03036 | deepkoala |
