Detailed information of XP_032220250.2 in Nematostella vectensis

Genomic Location: NC_064046.1:12611627...12621010
NR annotation: XP_032220250.2, protein piccolo isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BU11TOX high mobility group box family member 4 OS=Mus musculus OX=10090 GN=Tox4 PE=1 SV=3
Q99PM1TOX high mobility group box family member 4 OS=Rattus norvegicus OX=10116 GN=Tox4 PE=1 SV=1
O94842TOX high mobility group box family member 4 OS=Homo sapiens OX=9606 GN=TOX4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006109 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR051365
all species →
FamilyTOX high mobility group box domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45781
all species →
AGAP000281-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0031490
all species →
Molecular Functionchromatin DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_032220250.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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