Gene detail

Detailed information of XP_032220437.2 in Nematostella vectensis

Genomic Location: NC_064037.1:6581213...6594800
NR annotation: XP_032220437.2, probable RNA-binding protein 19 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5519561

ATGTCTCGTCTAATTGTAAAGAACCTTCCTCAAAATATCAAGGAGGACTACTTTCGCTCTATATTTGGCGCAAAGGGAGAGATTACTGACATCAAATTGTGTAGAACCAAAGATGGAAAGTTTCGACGTTTCGGGTTCGTTGGGTATAAGACCGAGAAACAAGCCGAGAATGCGCTTAAGTACTTCAATAACTCATTTATCGACACCTCTAAGATCCAAGTAGACCTTGCTAGGAATCTGGGTGATAAGGATGCCCCGAGACCATGGAGTAAATATTCCGAACATAGCTCTGCTTATCAGAAGAAGGTTAAAAAACTGCTTGAAAAGAACGAAGACAAAGTCGGGGCTAAGGATGATAAAGTCATGAAAAAGAAAAAGTCCAAAGAAAAAGTCAAGGGATTGGAAGAATTGGATGAGGATCCTGAGTTTCAGGAGTTCGTGAGTGCTCATGAATCACGCAGTAAAAAGTCATTGTGGAGCAACGATACTTTAATATCGAAACAGAGAAACTCAAATGAAAAGGAGACCGAGGTCTCCCCAAAGAAGATGGCAGTAAAATTTGAAGATTCTGATGAGAGCGATGATGATGTACCAATGGCAGATAAGCTGACTGAAGATATGGAACAAAATACTGATGACAACAGTAATACTGTTGCCAAAGACTCCTCTATATCTGATATGGATTACTTGCGGACAAAAGTGACATCAAGCAAAACAGAGTCTGATACAGATGTTAATAAGGAATTTGATTCTGATGATGATCGGGAGGAAACAATTGATGCTAGTAAAAACCCTGATGGTTCTTCTGATGTTGATGAGCCACAGGAAACTCCTCAACCAGATAAACCCAAGCCAACAACCCCTTGGACTTGCAAGATGAGGGGACTCCCATTCAAAGCAAAAGAAAAGCACATTTTAGAGTTTTTCTCTCCACTGAAACCAGTGGCTATCAGGTTTGTCATGAACAAGAAAGGCCAACCATCAGGCTGTGCATTTGTGGATTTTAGTAGTAAATCAGATCTTGAAAAAGCATTAAAAAGAAACAAGGACTATCTGCAGGGTAGATATATTGAGCTGTTCAAGGATACCAACAGAGACTTTGATAACAATAAACAAGGCGATGGTGAGAAATCATGGATGCGGAAACTCCAGGAAAAAGGAGATGACGAAGAAGAGGAGCCAATTGGAGAGTCTGGACGACTGTTCCTTCGTAACCTTGCTTACAGCTGCTCTGAGGAGGACATCCAGCATTTGTTTGAGAAGTTTGGGCCATTGTCAGAAGTCAACCTTCCATTAGACAAGCATACAAATAAGACCATTGGCATTGGATTTGTCACATTTCTTATGCCGGAGCATGCTGTCAAGGCATTCAATGAACTAGATGGAACAGTCTTTCAGGGGCGGTTACTTCATATACTTCCAGCTAAAGCTAAGAAGGAGGAAAGCAATGATAATGAAGAGAGCATATCCTACAAGAAGAAGAATGAAGAGAAGAAGAAAAAACAGAGCGGTAGCGACCACAACTGGAACACCTTATTTCTAGGGTTGAATGCAGTTGCTGATGTCATGGCTGACAAGTACAACACCTCAAAGAGAGACATTCTGGATGCTGAGTCATCACATAGCCTTGCGGTCCGCATGGCTCTGGGGGAGACTCAGCTTGTTGCTGAGACCAGGAAATTCCTGACTGAACAAGGAGTAAAACTAGATGTTTTTGGCCAGGCTGCTGCAAGTAGGAGCAAAACTGTTATCGTGGCCAAGAACCTTCCATATGGTACAAATGCAGAAGAGCTAAGGACACTGTTCTCAGCATTCGGCCAACTAGGAAGAGTTATTCTACCACCTTCTGGAATCACAGCTCTTATTGAAATTCCTGAGCCAAGTTTGGCAAGGAAAGCTTTCCAGAAACTTGCTTACTCAAAGTTCAAGAACTCACCTTTATATCTTGAGTGGGCACCACTTGATGTGTTCGTTGAGGGACAACTAAAGAAAGATTCTTTAGAGAAAACAGACAAGGATGCTGATCAATCTGAAGAACAAAATGCTGGAAGTGATGAGGAGGACACAGAGGGTGTAACCCTGTTTGTGAAAAACCTGAGCTTTGAATCAACAGAGGAAGCATTAAAACAAAAATTTGCTGCTGTAGGTCCTGTGAAGAGTGCAACCATCGCAAAGAAGAAGGACCCTAAGAAGCCAGGTAGCCTCTTATCTATGGGATATGGCTTCGTTGAGTTTTGCAATAAAGCATCAGCACAAGAAGCTTTGAAATCCCTGCAGCACTCTCAACTGGATGGTCATGCCCTAGAATTGAAGCAATCTCATCGGAAATCAGGAAAAGAAGAGTCCAAAAGAAAGAAATCTGCCAAACAGAAGCAAAAGAGCTCCAAGATACTGGTCCGTAATGTCCCATTTGAGGCAACAACTAAAGAGATAAGAGAGCTTTTCAGCACTTTTGGAGAAATCAAAACATTGCGTCTGCCCAAGAAGATGACAGGCACAGGTCCCCATAGAGGTTTTGCATTTGTGGATTTCCTCACCAAACAGGATGCTAAGCGTGCCTTTGAAGCACTATGCACCAGTACCCATTTGTATGGTCGCCGTCTGGTGTTGGAATGGGCAGAAGATGAAGATGATGTTGACACACTCAGAAAACGTACCGCTGATCACTTTCATGGAGAACAAAAGAAAACAAAAAAGAAGAGCATCCAAGACTCTCTTATGGACGCCATGTCTATCGACGAGTAG

Transcript

rna-XM_032364546.2

AtttcgggtaccctgtggcaCGTCAAACGTTCGCACGTGACACAGCAAAACAAGATGGCTTCCACGTGGTTAGCAAAAGATGTCGCTATCCCTAactaaaatcaaaattgtacGCGCAAACTTAAAGAACACTTAAATCATGTCTCGTCTAATTGTAAAGAACCTTCCTCAAAATATCAAGGAGGACTACTTTCGCTCTATATTTGGCGCAAAGGGAGAGATTACTGACATCAAATTGTGTAGAACCAAAGATGGAAAGTTTCGACGTTTCGGGTTCGTTGGGTATAAGACCGAGAAACAAGCCGAGAATGCGCTTAAGTACTTCAATAACTCATTTATCGACACCTCTAAGATCCAAGTAGACCTTGCTAGGAATCTGGGTGATAAGGATGCCCCGAGACCATGGAGTAAATATTCCGAACATAGCTCTGCTTATCAGAAGAAGGTTAAAAAACTGCTTGAAAAGAACGAAGACAAAGTCGGGGCTAAGGATGATAAAgtcatgaaaaagaaaaagtccaAAGAAAAAGTCAAGGGATTGGAAGAATTGGATGAGGATCCTGAGTTTCAGGAGTTCGTGAGTGCTCATGAATCACGCAGTAAAAAGTCATTGTGGAGCAACGATACTTTAATATCGAAACAGAGAAACTCAAATGAAAAGGAGACCGAGGTCTCCCCAAAGAAGatGGCAGTAAAATTTGAAGATTCTGATGAGAGCGATGATGATGTACCAATGGCAGATAAGCTGACTGAAGATATGGAACAAAATACTGATGACAACAGTAATACTGTTGCCAAAGACTCCTCTATATCTGATATGGATTACTTGCGGACAAAAGTGACATCAAGCAAAACAGAGTCTGATACAGATGTTAATAAGGAATTTGATTCTGATGATGATCGGGAGGAAACAATTGATGCTAGTAAAAACCCTGATGGTTCTTCTGATGTTGATGAGCCACAGGAAACTCCTCAACCAGATAAACCCAAGCCAACAACCCCTTGGACTTGCAAGATGAGGGGACTCCCATTCAAAGCAAAAGAAAAGCACATTTTAGAGTTTTTCTCTCCACTGAAACCAGTGGCTATCAGGTTTGTCATGAACAAGAAAGGCCAACCATCAGGCTGTGCATTTGTGGATTTTAGTAGTAAATCAGATCTTGAAAAAGcattaaaaagaaacaaggACTATCTGCAGGGTAGATATATTGAGCTGTTCAAGGATACCAACAGAGACTTTGATAACAATAAACAAGGCGATGGTGAGAAATCATGGATGCGGAAACTCCAGGAAAAAGGAGATGACGAAGAAGAGGAGCCAATTGGAGAGTCTGGACGACTGTTCCTTCGTAACCTTGCTTACAGCTGCTCTGAGGAGGACATCCAGCATTTGTTTGAGAAGTTTGGGCCATTGTCAGAAGTCAACCTTCCATTAGACAAGCATACAAATAAGACCATTGGCATTGGATTTGTCACATTTCTTATGCCGGAGCATGCTGTCAAGGCATTCAATGAACTAGATGGAACAGTCTTTCAGGGGCGGTTACTTCATATACTTCCAGCTAAAGCTAAGAAGGAGGAAAGCAATGATAATGAAGAGAGCATATCCTACAAGAAGAAGAATGaagagaagaagaaaaaacagagcGGTAGCGACCACAACTGGAACACCTTATTTCTAGGGTTGAATGCAGTTGCTGATGTCATGGCTGACAAGTACAACACCTCAAAGAGAGACATTCTGGATGCTGAGTCATCACATAGCCTTGCGGTCCGCATGGCTCTGGGGGAGACTCAGCTTGTTGCTGAGACCAGGAAATTCCTGACTGAACAAGGAGTAAAACTAGATGTTTTTGGCCAGGCTGCTGCAAGTAGGAGCAAAACTGTTATCGTGGCCAAGAACCTTCCATATGGTACAAATGCAGAAGAGCTAAGGACACTGTTCTCAGCATTCGGCCAACTAGGAAGAGTTATTCTACCACCTTCTGGAATCACAGCTCTTATTGAAATTCCTGAGCCAAGTTTGGCAAGGAAAGCTTTCCAGAAACTTGCTTACTCAAAGTTCAAGAACTCACCTTTATATCTTGAGTGGGCACCACTTGATGTGTTCGTTGAGGGACAACTAAAGAAAGATTCTTTAGAGAAAACAGACAAGGATGCTGATcaatctgaagaacaaaatgcTGGAAGTGATGAGGAGGACACAGAGGGTGTAACCCTGTTTGTGAAAAACCTGAGCTTTGAATCAACAGAGGAAGCATTAAAACAAAAATTTGCTGCTGTAGGTCCTGTGAAGAGTGCAACCATCGCAAAGAAGAAGGACCCTAAGAAGCCAGGTAGCCTCTTATCTATGGGATATGGCTTCGTTGAGTTTTGCAATAAAGCATCAGCACAAGAAGCTTTGAAATCCCTGCAGCACTCTCAACTGGATGGTCATGCCCTAGAATTGAAGCAATCTCATCGGAAATCAGGAAAAGAAGAGtccaaaagaaagaaatctGCCAAACAGAAGCAAAAGAGCTCCAAGATACTGGTCCGTAATGTCCCATTTGAGGCAACAACTAAAGAGATAAGAGAGCTTTTCAGCACTTTTGGAGAAATCAAAACATTGCGTCTGCCCAAGAAGATGACAGGCACAGGTCCCCATAGAGGTTTTGCATTTGTGGATTTCCTCACCAAACAGGATGCTAAGCGTGCCTTTGAAGCACTATGCACCAGTACCCATTTGTATGGTCGCCGTCTGGTGTTGGAATGGGcagaagatgaagatgatgttgACACACTCAGAAAACGTACCGCTGATCACTTTCATGGAGaacaaaagaaaacaaaaaagaagagCATCCAAGACTCTCTTATGGACGCCATGTCTATCGACGAGTAGAAGCCTTAAGACGAAGAGACAAAGACAATTGTCCTCTATGGTTTGATGGCAAGGACCGCATCACAAAATGCAGCGTCGGTTGTTCTAGCCTGTACGTTGACAAACCCGTGTTTCTGGAAGAGTTCTTTGTATTCTTGTGCTGTTCTCTCGCGAGAGCCACTATCAGCAAACGCGAGCATTAACATACTCATTAAGTTGCCAGTGATGTGACCTGTCTTGTCCTCTGGTAGCAGTATCTCTCCTAGGAGCACTCCGCCACCTATTTAATACAATATTCAAAACAGTTCAGTGAGAAAATCGTTTGCTTTTGAGGTGCGAAGGAGTTTGAGTAATCagtaaaatatttctttacaTTCCCCAATGAAACAAagattgttttcttcttccca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y4C8	Probable RNA-binding protein 19 OS=Homo sapiens OX=9606 GN=RBM19 PE=1 SV=3
Q8R3C6	Probable RNA-binding protein 19 OS=Mus musculus OX=10090 GN=Rbm19 PE=1 SV=1
Q54PB2	Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium discoideum OX=44689 GN=mrd1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003543 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034417 all species →	Domain	Probable RNA-binding protein 19, RNA recognition motif 2	Interproscan
IPR034423 all species →	Domain	Probable RNA-binding protein 19, RNA recognition motif 5	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR051945 all species →	Family	RRM MRD1 RNA Processing and Ribosome Biogenesis	Interproscan
IPR034419 all species →	Domain	Probable RNA-binding protein 19, RNA recognition motif 3	Interproscan
IPR034418 all species →	Domain	Probable RNA-binding protein 19, RNA recognition motif 1	Interproscan
IPR034421 all species →	Domain	Probable RNA-binding protein 19, RNA recognition motif 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48039 all species →	RNA-BINDING MOTIF PROTEIN 14B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14787	MRD1, RBM19; multiple RNA-binding domain-containing protein 1	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032220437.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

37TPM > 0

16Conditions

12.2Max TPM

5.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	6.30	7.24
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	5.27	6.84
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	4.34	5.59
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	7.46	9.25
whole 6 week old aboral regenerate · regenerate uncut	3	3	5.03	5.68
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	2.75	8.26
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	3.81	5.85
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	9.95	11.20
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	7.18	12.20
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	6.77	10.78
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	7.40	8.64
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	4.99	8.38
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	5.50	8.83
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	6.16	10.17
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	4.81	7.55
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	2.41	7.23

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.24
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.14
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	4.52
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.84
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.69
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.28
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	5.59
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	3.91
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	3.52
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.25
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.83
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.30
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.68
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.35
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.06
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.26
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.85
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.59
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	11.20
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	10.54
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	8.11
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	12.20
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.35
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	10.78
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	9.53
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	8.64
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.54
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.03
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	8.38
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.58
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	8.83
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.66
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	10.17
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.30
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.55
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	6.89
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	7.23
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.