Gene detail

Detailed information of XP_032221093.2 in Nematostella vectensis

Genomic Location: NC_064045.1:13435946...13456099
NR annotation: XP_032221093.2, regulatory-associated protein of mTOR [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5520151

ATGATATCTGTAGACGAGGTTGAGCCGGAGGAAGGGCAGTTAGAGGAAGATGAGGGTGAAATAGTCGACTGGCAACTTCCCTTATGTTTCATGAAAAAGAGGCACAAGGAACCGATAGCTGGCGCTGAACTTCTTGCACAGACATGGCGAATGAAAGAAAGGATGAAAACCGTCAGTGTTGCGCTAGTACTGTGTCTCAATGTTGGGGTTGATCCGCCCGATATTGTGAAGACGAGTCCCTGTGCGCGCCTCGAATGTTGGATAGACCCTCTGTCTGTGACGCCACACAAAGCTCTTGAGACCGTGGGCAATAAACTCCAAGAGCAGTATGAGAGATGGCAGCCGAGGGCACGCTACAAACAGAGTCTTGACCCAACAGTTGAGGAAGTCAAGAAACTCTGTACTTCTCTACGGAGAAATGCTAAGGAAGAGAGAGTCCTCTTCCATTACAATGGTCATGGGGTGCCAAGACCAACTGTTAATGGAGAAATCTGGGTCTTTAATAAGAGCTATACCCAGTACATCCCACTGTCAGTTTATGACCTACAAACATGGATGGGGAGCCCTTCCATATTTGTCTACGACTGTAATAATGCAGGACTTATCCTACAGTCCTTCAACACATTTGCAAGTCAGCGTGAGCAAGAACACGAGAGATGTTTGACTCAAGGCACGCCCATGCCTGTGCCGCTAGCTGTTAAGAACTGCATCCAGCTTGCAGCTTGTGCAGCCAATCAGCTGTTACCAATGAACCCTGAGCTTCCTGCCGATCTGTTCACCTCATGTCTGACCACACCCATCAAAGTTGCCTTGAGATGGTTTTGCAGCCAAAACAGCAGCAAGATTGTCCCGGGGATGACCTTAGAATTAATAGAAAAAATACCAGGTAGACTGAATGACAGGCGAACACCACTTGGTGAACTGAACTGGATATTTACTGCAGTGACAGATACCATTGCCTGGAATATGCTTCCAAGAGAGTTATTTCACAAGCTGTTTAGACAAGACCTCTTGGTTGCTAGTTTGTTCAGGAATTTCCTGTTGGCTGAGAGAGTTCTGCGCTCCTTCAACTGCACTCCAGTATCCAGTCCGCAACTGCCACCAACCTATATGCACCCAATGTGGCATGCATGGGATCTGGCTGTAGATCTTTGTCTTTTGCAACTACCAGAAGTCATAGAAAACCCAGCCAATTTTAAAAACAGTGCCTTTTTCTCCCAACAACTGACAGCATTTCAAGTGTGGCTTGCGATGGGTTCAGAGATGCGCGACCCCCCGGAGCAGTTGCCAATAGTTCTGCAAGTTCTTCTTAGTCAGGTCCATAGACTTCGGGCTCTTGACCTTTTGGGCCGTTTCCTTGACCTTGGGCCATGGGCTGTCAATTTGGCCCTGTCTGTAGGGATATTCCCATATGTGCTTAAGCTACTACAGAGTTCCGCACGAGAACTTAGACCCCTATTAGTCTTCATCTGGGCAAAGATTCTTGCAGTTGACAGCTCATGCCAATCTGACCTTGTGAAGGATAATGGCCACAAATACTTCTTGTCCGTCTTGGCTGACCCTTACATGCCGGCTGAGCATCGCACCATGGCAGCCTTCGTCCTCTCGGCCATCATCAATGGCTTCCCCAGCGGCCAAGAGGCATGTCTCCAAGGCAACCTCATTGCCATCTGTCTAGAACAGCTGACAGACCCTCATCCACTCTTGCGCCAGTGGCTGGCTGTCTGTCTGGCAAAGGTTTGGGCAAGTTATGATGCAGCCAGGTGGTGCGGGGTGCGGGACACAGCACCAGAGAAGCTCTATTGCCTGCTGTCTGACCCTCTTCCTGAGGTTAGAGCAGCGGCGGTGTATGCTCTAGGAACATTCATTGCCAACACAGGGGACAGGTCAGACCATGCCAATCAGATTGACTTTGGCGTTGCCATGACACTCACGCAGCTTGGCCAGGATGGTAGTCCCTTAGTCAGAAAGGAACTTGTCGTATCCCTACATGGACTTGTCATACAGTTTGAAACTAACTTTGGGGTAGTCGCCCTGCAATTTTTGGATGAGGATCGACAAAAAGAGAATGCTCCACCTGCCGCAGCCATCACATCCACAGGGTGGATAGTGGTGGGGTCTGGTTCGTCAGGAACACCCACCACACCCGAACCCCAGACCCCTGTCAGGAAGCTGTCACGTGGTCTACGGACCAGCCTTTCATCCTCACAGCTTAGTGCTTATGGATCAAACCCCCAAGTGCCCGGTCACCAAACCAACTCTCCTGCAGGCCTTATGCATTACAGCAGTAGTAGCAGTAGCTCCAGCAGCTCTGATTTCTTTGCTGCTAAAGAACTTCGACGAACACCTTCAACCTCCTCGCTATCCTCATCTTTTCAGTCTAATGTATATGCCAATACATGGAAGGCCCTCCTTAACTTGTCTGTAGACCCAGACCGCTCGGTCTGTGACAAAGCCAAAAAGATTGTCAACAATATAACACTCAAGGCCACTATCAGTGCTAACCCACAAAAGGTCACCGGTACAAACATTCGCTCACAGTCAACGTCTGCACCCTCATCACCTAGCGGCCGCTACACTAACCCGTTTCCGCATCAGAGAGAACAGAACTCGCCCCCAGTGCACCACAGGAGTCACCAAAGCATCTCCCAGCCCACGACTCCCTCAAGAGGTGAAGCACCCCGCATGGGGGGTGCCCAGGGGAATCCTGGTATTTATCATCCACACTCATACGAGTTCCATGTCAAAAGGAAGGTGTTTGGCAAAGGACCCGATGAAGAGCACATGGCTGGTACAGGAGATGAAGTTGATTCTGACGATGAAACGTCGCCAATGAAGCCTCAGATCATTAGAACAAACTTTGCTGAGTGGTGTGCCAGTTACTTTGCACAGTCAGTCATGAAGCCGCCCGAAGAACACGACCCCCAGAGCCAGCTTCATCTTCAGAGGGAATGGCGGTTTGAGCGGAACTCGCGAGTGCGGCGAGAAGCTGCAAGACAACAAGCAAGGGCAGACGTGTGCAAGCTGGATGACCAGATCTTCATCAATAAGAACATCCACCCCCCTGGTATACTACGGTTTCATCCCTACGAGCCTCACCTGGCTGTGGCAGACAGGGGGGGAGTCAGTATTTGGAATTGGGAACAGGGAGCACGGATGAATTATTTTAACAACAACAACAGCAAGCTAACAAGAATTACTAGCATGGAGTTCCTCAACGCTCATGACTTGACCCTACTGCTGACTGGAACAGACGATGGTTCTGTCCGTGTCTGGCGTGACTATGATGGCGTCGAGTCCCCAGTTGAGGTGGTTACCGCCTGGCAAGCGTTGTCTGGGATGTTACCCTCTACGCGCGGTAGCGGCTCTGGTCTCGTCGTCAATTGGGAACAGGAAACTGGGATTTTACTCGCGTCGGGCGACGTTAGGTTTATACGTGTGTGGGACACGCAGCGAGAGATGAAAATGCAGGACATCCCGACGGGTGCAGACAGCTGCGTGACAAGCCTTGCCTGTGATTCTGTCGGACGCTCGCTACTAATTGCTGGCTGTGGTGATGGGTCTGTCCGGTTATATGACCGTCGGCTTCCTCCGTCGGACAGCCGGGTGATGGCGCTACGAGAGCACACAGGCTGGGTGACAAGCGTCTTTCTACAGAAAGGTGGAGACGGCAACATTATAAGCGGCAGCGTCGCTGGCGACGTGCGCTTCTGGGACCCACGGTTCACCGAGTCAGTCAAAGGTTTCGATACTCTGAATAACATGACCTCATTCGAGGTCCATCAACAAGCAAAGGTCCTAGCCAGTGGCTCAGCCAATCAGATCATCAAGGTGATGGACCTAGACGGAGGCATGCGCAGTGTGATCCGTTACCACGACGGGTTCATGGGTCAGCGGATTGGCCCAGTCAGCTGCATGGAGTTCCATCCTCACAGGGTTCACCTTGCGGCCGGAAGCACTGATTCCTTCATTTCGATCTACTCGACGGAGAAAAAGAGATGA

Transcript

rna-XM_032365202.2

acactgacatgcgcagtgaaAACCCCGGAGGTCAACTTGAAACACGTTTTACTACAAACGAGAAACTTCACGAAACCGGCAATGAAAATGTGTGTTTTACCGTGCCGATTGCTTGAAGTTGGGTGATAATAGAAAGTGGAGGCAGTAATGATATCTGTAGACGAGGTTGAGCCGGAGGAAGGGCAGTTAGAGGAAGATGAGGGTGAAATAGTCGACTGGCAACTTCCCTTATGTTTCATGAAAAAGAGGCACAAGGAACCGATAGCTGGCGCTGAACTTCTTGCACAGACATGGCGAATGAAAGAAAGGATGAAAACCGTCAGTGTTGCGCTAGTACTGTGTCTCAATGTTGGGGTTGATCCGCCCGATATTGTGAAGACGAGTCCCTGTGCGCGCCTCGAATGTTGGATAGaCCCTCTGTCTGTGACGCCACACAAAGCTCTTGAGACCGTGGGCAATAAACTCCAAGAGCAGTATGAGAGATGGCAGCCGAGGGCACGCTACAAACAGAGTCTTGACCCAACAGTTGAGGAAGTCAAGAAACTCTGTACTTCTCTACGGAGAAATGCTAAGGAAGAGAGAGTCCTCTTCCATTACAATGGTCATGGGGTGCCAAGACCAACTGTTAATGGAGAAATCTGGGTCTTTAATAAGAGCTATACCCAGTACATCCCACTGTCAGTTTATGACCTACAAACATGGATGGGGAGCCCTTCCATATTTGTCTACGACTGTAATAATGCAGGACTTATCCTACAGTCCTTCAACACATTTGCAAGTCAGCGTGAGCAAGAACACGAGAGATGTTTGACTCAAGGCACGCCCATGCCTGTGCCGCTAGCTGTTAAGAACTGCATCCAGCTTGCAGCTTGTGCAGCCAATCAGCTGTTACCAATGAACCCTGAGCTTCCTGCCGATCTGTTCAcctcatgtctgaccacacCCATCAAAGTTGCCTTGAGATGGTTTTGCAGCCAAAACAGCAGCAAGATTGTCCCGGGGATGACCTTAGAATTAATAGAAAAAATACCAGGTAGACTGAATGACAGGCGAACACCACTTGGTGAACTGAACTGGATATTTACTGCAGTGACAGATACCATTGCCTGGAATATGCTTCCAAGAGAGTTATTTCACAAGCTGTTTAGACAAGACCTCTTGGTTGCTAGTTTGTTCAGGAATTTCCTGTTGGCTGAGAGAGTTCTGCGCTCCTTCAACTGCACTCCAGTATCCAGTCCGCAACTGCCACCAACCTATATGCACCCAATGTGGCATGCATGGGATCTGGCTGTAGATCTTTGTCTTTTGCAACTACCAGAAGTCATAGAAAACCCAGCCAATTTTAAAAACAGTGCCTTTTTCTCCCAACAACTGACAGCATTTCAAGTGTGGCTTGCGATGGGTTCAGAGATGCGCGACCCCCCGGAGCAGTTGCCAATAGTTCTGCAAGTTCTTCTTAGTCAGGTCCATAGACTTCGGGCTCTTGACCTTTTGGGCCGTTTCCTTGACCTTGGGCCATGGGCTGTCAATTTGGCCCTGTCTGTAGGGATATTCCCATATGTGCTTAAGCTACTACAGAGTTCCGCACGAGAACTTAGACCCCTATTAGTCTTCATCTGGGCAAAGATTCTTGCAGTTGACAGCTCATGCCAATCTGACCTTGTGAAGGATAATGGCCACAAATACTTCTTGTCCGTCTTGGCTGACCCTTACATGCCGGCTGAGCATCGCACCATGGCAGCCTTCGTCCTCTCGGCCATCATCAATGGCTTCCCCAGCGGCCAAGAGGCATGTCTCCAAGGCAACCTCATTGCCATCTGTCTAGAACAGCTGACAGACCCTCATCCACTCTTGCGCCAGTGGCTGGCTGTCTGTCTGGCAAAGGTTTGGGCAAGTTATGATGCAGCCAGGTGGTGCGGGGTGCGGGACACAGCACCAGAGAAGCTCTATTGCCTGCTGTCTGACCCTCTTCCTGAGGTTAGAGCAGCGGCGGTGTATGCTCTAGGAACATTCATTGCCAACACAGGGGACAGGTCAGACCATGCCAATCAGATTGACTTTGGCGTTGCCATGACACTCACGCAGCTTGGCCAGGATGGTAGTCCCTTAGTCAGAAAGGAACTTGTCGTATCCCTACATGGACTTGTCATACAGTTTGAAACTAACTTTGGGGTAGTCGCCCTGCAATTTTTGGATGAGGATCGACAAAAAGAGAATGCTCCACCTGCCGCAGCCATCACATCCACAGGGTGGATAGTGGTGGGGTCTGGTTCGTCAGGAACACCCACCACACCCGAACCCCAGACCCCTGTCAGGAAGCTGTCACGTGGTCTACGGACCAGCCTTTCATCCTCACAGCTTAGTGCTTATGGATCAAACCCCCAAGTGCCCGGTCACCAAACCAACTCTCCTGCAGGCCTTATGCATTACAGCAGTAGTAGCAGTAGCTCCAGCAGCTCTGATTTCTTTGCTGCTAAAGAACTTCGACGAACACCTTCAACCTCCTCGCTATCCTCATCTTTTCAGTCTAATGTATATGCCAATACATGGAAGGCCCTCCTTAACTTGTCTGTAGACCCAGACCGCTCGGTCTGTGACAAAGCCAAAAAGATTGTCAACAATATAACACTCAAGGCCACTATCAGTGCTAACCCACAAAAGGTCACCGGTACAAACATTCGCTCACAGTCAACGTCTGCACCCTCATCACCTAGCGGCCGCTACACTAACCCGTTTCCGCATCAGAGAGAACAGAACTCGCCCCCAGTGCACCACAGGAGTCACCAAAGCATCTCCCAGCCCACGACTCCCTCAAGAGGTGAAGCACCCCGCATGGGGGGTGCCCAGGGGAATCCTGGTATTTATCATCCACACTCATACGAGTTCCATGTCAAAAGGAAGGTGTTTGGCAAAGGACCCGATGAAGAGCACATGGCTGGTACAGGAGATGAAGTTGATTCTGACGATGAAACGTCGCCAATGAAGCCTCAGATCATTAGAACAAACTTTGCTGAGTGGTGTGCCAGTTACTTTGCACAGTCAGTCATGAAGCCGCCCGAAGAACACGACCCCCAGAGCCAGCTTCATCTTCAGAGGGAATGGCGGTTTGAGCGGAACTCGCGAGTGCGGCGAGAAGCTGCAAGACAACAAGCAAGGGCAGACGTGTGCAAGCTGGATGACCAGATCTTCATCAATAAGAACATCCACCCCCCTGGTATACTACGGTTTCATCCCTACGAGCCTCACCTGGCTGTGGCAGACAGGGGGGGAGTCAGTATTTGGAATTGGGAACAGGGAGCACGGATGAATTattttaacaacaacaacagcaagcTAACAAGAATTACTAGCATGGAGTTCCTCAACGCTCATGACTTGACCCTACTGCTGACTGGAACAGACGATGGTTCTGTCCGTGTCTGGCGTGACTATGATGGCGTCGAGTCCCCAGTTGAGGTGGTTACCGCCTGGCAAGCGTTGTCTGGGATGTTACCCTCTACGCGCGGTAGCGGCTCTGGTCTCGTCGTCAATTGGGAACAGGAAACTGGGATTTTACTCGCGTCGGGCGACGTTAGGTTTATACGTGTGTGGGACACGCAGCGAGAGATGAAAATGCAGGACATCCCGACGGGTGCAGACAGCTGCGTGACAAGCCTTGCCTGTGATTCTGTCGGACGCTCGCTACTAATTGCTGGCTGTGGTGATGGGTCTGTCCGGTTATATGACCGTCGGCTTCCTCCGTCGGACAGCCGGGTGATGGCGCTACGAGAGCACACAGGCTGGGTGACAAGCGTCTTTCTACAGAAAGGTGGAGACGGCAACATTATAAGCGGCAGCGTCGCTGGCGACGTGCGCTTCTGGGACCCACGGTTCACCGAGTCAGTCAAAGGTTTCGATACTCTGAATAACATGACCTCATTCGAGGTCCATCAACAAGCAAAGGTCCTAGCCAGTGgctcagccaatcagatcATCAAGGTGATGGACCTAGACGGAGGCATGCGCAGTGTGATCCGTTACCACGACGGGTTCATGGGTCAGCGGATTGGCCCAGTCAGCTGCATGGAGTTCCATCCTCACAGGGTTCACCTTGCGGCCGGAAGCACTGATTCCTTCATTTCGATCTACTCGACGGAGAAAAAGAGATGAGCAAGTCGCAACAGGGGGACGTCTActtcctcccctcccctcccctatcTGTGGGGCTGTTATTAGTATCTCTCCTTTAGCACTTGATATTAAGTGCCAATTGCGCCCCATAGATATATTTTGGGTCCCACCTGAGAGACATGAAAAATGTTAATTAATAACCATGGAGATGGACATTCAAATGTTCCTCTTGGATAAGGCAATGAAAAGAAACTCGGAAATGCCGGGAAAACAAATCGCTAaaggatacctgtggtattcGAATAGTATTGTTGGGATTAAGACGACGATAAATGAATATTGAATTATGTTATTTTGATACATCAAAGCTATGTAAATATTATCTTatgtcttttttgttttttaacgtTGTATTATTTGAGTGATTTTAGAACTATGGTTTTCATTGTCTCAGTCTTGTGAGGTGTGTTTGTAAATTTTCTCCAGATTTGCCCATCTGGGTAGGTAACGGATTCAGTGTATTGTATatttaaaatttaataaatagTTAAACCTGTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N122	Regulatory-associated protein of mTOR OS=Homo sapiens OX=9606 GN=RPTOR PE=1 SV=1
Q8K4Q0	Regulatory-associated protein of mTOR OS=Mus musculus OX=10090 GN=Rptor PE=1 SV=1
Q55BR7	Protein raptor homolog OS=Dictyostelium discoideum OX=44689 GN=raptor PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004375 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14538 all species →	Raptor_N	Raptor N-terminal CASPase like domain	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR029347 all species →	Domain	Raptor, N-terminal CASPase-like domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR004083 all species →	Family	Regulatory associated protein of TOR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12848 all species →	REGULATORY-ASSOCIATED PROTEIN OF MTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0009267 all species →	Biological Process	cellular response to starvation	Interproscan
GO:0010506 all species →	Biological Process	regulation of autophagy	Interproscan
GO:0030307 all species →	Biological Process	positive regulation of cell growth	Interproscan
GO:0030674 all species →	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0031929 all species →	Biological Process	TOR signaling	Interproscan
GO:0031931 all species →	Cellular Component	TORC1 complex	Interproscan
GO:0038202 all species →	Biological Process	TORC1 signaling	Interproscan
GO:0071230 all species →	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071902 all species →	Biological Process	positive regulation of protein serine/threonine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07204	RAPTOR; regulatory associated protein of mTOR	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032221093.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

44TPM > 0

16Conditions

32.9Max TPM

16.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	17.11	19.70
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	13.73	20.19
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	18.40	21.54
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	25.91	32.85
whole 6 week old aboral regenerate · regenerate uncut	3	3	13.08	14.84
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	13.81	24.06
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	17.41	19.83
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	17.16	18.75
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	16.11	20.00
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	18.23	20.32
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	14.89	17.48
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	21.77	31.88
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	16.22	18.32
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	13.03	21.77
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	16.18	19.97
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	6.56	19.67

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	19.70
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	19.27
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	12.37
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	20.19
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.96
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.04
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	21.54
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	17.21
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	16.45
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	32.85
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	25.45
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	19.44
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.84
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.18
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	10.21
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	24.06
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	17.38
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	19.83
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	17.07
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	15.33
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	18.75
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	18.69
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	14.04
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	20.00
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	15.01
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	13.32
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	20.32
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	17.94
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	16.44
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	17.48
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	14.38
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	12.82
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	31.88
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	18.35
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	15.08
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	18.32
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	16.04
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	14.31
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	21.77
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	17.33
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	19.97
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	16.94
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.62
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	19.67
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.