Gene detail

Detailed information of XP_032222314.2 in Nematostella vectensis

Genomic Location: NC_064035.1:10452851...10464390
NR annotation: XP_032222314.2, IQ calmodulin-binding motif-containing protein 1 isoform X1 [Nematostella vectensis]
Species abbreviation NVECT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_032366423.2

ATAGATGCTTTGCGGACCTCgatatcaaaacaaaaatggcgGACGGTTTGAGAAGTGATATGTGCTTCCATCGAGCTTGCTCGTAGATAAAGAAAGGATGGACTTTGAATCACCAGCGGAAGTAAGGCAAAGAGCATTGCACTTGGCAGCGGAGGTAGCAGAAACTGAAGACAGTAATGTTCCTGTGCTATTGTTAGGACTTCGAGATATCCTAGAGTGCTCCCCAGTAAAAAGTGAACTTGGGACAATAATTAGGATTGACCTGTGGACCTACGACCTCATCCATGTCACAAACTTAGCCTTACGGCAGGACTTCAATGCAATCCAAGGACAGTGGAGTACAGCAGCAAATTTGAGTGTACTTCTGTGTCAGTGCTGTGTTGGATTGGATCTACCTGAAGTAGAAGAATATGAAAGGGCTTTCCTTCCAAGTGTCTTGGAGAGTGTGCTCACAGTTGCATCCAAAATTCATGACATATTTAGCAAAGAAACACTGGATGAAGACCGATCATACTACTTACACCATGTGAAAAACATCTTCAGTTGGTTACAACAGCTCATCTCAGCACATGCACATCTTGCAACTAAATTTGTGCAGTCTAAGCGGTTACTGCAAATGTTGATGACAGAAGACCCCCAAGTTGGCCTGATAATCATGTCTGTTTTGGAGGATATTTGGAAGTCTAACAGgTTTGTGCTAGATGAATTGAGTCCTCCATCCTTACACAGTATTTTGGATGAGATTATCTTCAAGTTATCTGCCTCAGATGACACTTCCATCGGCAGGACATCAACACATCTAGTACTGACAGCTGCAAAGTGTAATCAGTCAGTCGTACAGATTTTACTCTCAAAGAGATACAGGGGTGTCAAAGCTTACCTTAGCAAATGGCGAGGCCGAGGTTTTGACAGTGATGTCAAGCACTTGATTGGTTTGCTAGAGGCAGGGACTGCTGCTCAGGCTGAACAAATGaaatttTCCTCTGCTGCCACCACTATTCAGTCTGGTTTCCGTGGCTACAAGACGCGGAAACAGTTGGAGCTTGCTAAGGCTGGCATGACTAAATTGCAACGACTATTTCGGCAAAAGCGTGATTTAAAAATCAGAGAGGCAGAAAGAGTTAAGGAGGAAGAAAACAGAAAGCATCTAGCCGGGCAGAAGCGAATACAAGAATTCAGGTGCTCAATGAAAAAACAGCTTAAGCTCCTAGAGACTGTACCTGCTCGAGAAGTAAACAAACACATGCAGGAAAACCAGATCGCCGCAGCTACAACGATACAAGCCGCTTACCGCGGCATGCGCTGTAGAAGACAGGCCCAGCACGTGCGGACACACCTACTGAGGGTCCGTGCGGCTATACGAATACAACGACAGTTCCGTCGGTACCGTAAGGGGAAGGAGGATAAGCCACCGCACCCCTTCCTGTCTGGTCTGACTGATGCCCGCAGAGTGGAGCTTCAAGAGATCATCGTGCAACGTAGAGAGAGGTTCCCGCCGAAGCACAGGACCCCCGTGGAGCTGAAAGAGTTGCACGAGAAGGCACACAGTCTCCTGTCCAGTCACGTGATGGTTGCAATGAAGGCGCGACGAGATGAGCAGAGAAGGGATGCGTTGATGGCCCGGCTAGAGATGGACTCGGACCACCTCCTAGCTGCCCCTGGGCTGGAAGCGGCAAAGACTGAAGTGATTGACAGCTACACATCCCAGTCGGCTCCGGTCATTACCAAGGCCAAGATGGAACACAGCGCAAAGTTACGATACTACAAGTTACCCTGGTGGAAAAAATTGAATGACGAAGAATTGCTACAGTCAGAGAGGACGTCGCAGAGAACTACTAACAATATACAGAGGGAATGTGAAACCGATCCAGTCCTACAGTTTTGATATATAATTTCAGATAGCGCTGTATAGAATTTTAAACAATGGACATACAATCAGGGGCAGATCCAGAAGTTCAAAAAACGGAGGACCCCTTTTTGGTTCACCCCAAATTATCTGCcgatttcattattttttacgctgtgtctacttgcacggcttccggtaaaggaaGTTTTCTCGATTTTAAGCCTAAATAAGAAGTTTCTGGCTTTAAAACACTTCCACGATTACTTAGAACAGCCAAGCGacgatttttagcctgaaaagCTATGCAACAAGCGGCCCGCAAATACTCGGCAAAGTATGAACGAAGCGTGGATCATGCATCGTTCATTGTGCCGAGCATTCGCATGTCGCCTTTAGCGAATTTTTTCAAGCTCGAAGCCATCGCTTGACGGTTCTAAATAACGGTGGGAGGTTTTTAAAGTCAAAACTTTTCATTTTGGTTTAATGgcaaaaaaaagggaagtgcatctacttttttttctccctGCACAGCTGTTTTGGCGAAAACGAGGTGTCGGACTCCAGGCTTCATTCATACTGTGCCGAGCATTTGCGGGTCACTCAATGCACAGCTTTTCAagctaaaaaaacatctcttgGCTTTTCTTAATAATCGTGGAAGTGTTttaaagccagaaacttgttacttaggctaaaaatcgagaaaatgggagacagccgtgcagctagttttttccctcctttaccggaagccgtgcaagtagacacaACGTATTTTTTAAGCTGTCAGAGCATCAACATGGCCCAACTAGTCACTAGGTTTTACATATTCCAAGACTAGGGAGAGGAATAGGTAGAAGCTGATTCCAAATATGGTTGCACTTGGAGAATCAATGCATCATAGTAATCGGCAGAGCGTCATGGGTATCAAAATACATTTTGGCTTCCATCCGTCTATTCATTGACCTGTTTTTATTGGACTACTTAGATAGCCTCCAATCAAACCATTTCACAGCAATAGGTTGACCAATCAGAAGGTACCCATGCAAATTCAAAACTTGATTGACAGAAGTGATAAGTGGTTTACCATTTTGGAAATcttgaatgaatgaatgaatcgTTTATTATCCACTTAAGCGAGAATTCTCTGGACAATCAAAATTGCCAGTTTTGCATAAGGTGTGGCTTTCTTGATTATGTGTTTGTAAATATTTACATGACTCTCAGAGACCAGTATTTTGCAATTTATATGTTACTCATGAAACACTAAAGGCTATGACACACATTTTTAAGTGTGaccatatttgaaataggtgtataacaACTATGATCCTTCATATACATAGTAAAGAGACATTTGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BP00	IQ calmodulin-binding motif-containing protein 1 OS=Mus musculus OX=10090 GN=Iqcb1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005660 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR028765 all species →	Family	IQ calmodulin-binding motif-containing protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15673 all species →	IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16774	IQCB1, NPHP5; IQ calmodulin-binding motif-containing protein 1	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.