Gene detail

Detailed information of XP_032222645.2 in Nematostella vectensis

Genomic Location: NC_064039.1:5760839...5789570
NR annotation: XP_032222645.2, U5 small nuclear ribonucleoprotein 200 kDa helicase-like isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5521428

ATGGCTGATGCTACAGCTAGGTCGCTGCAATATGAGTACAAAGCGAACTCCAATCTTGTGTTGCAAGCTGATCGGTCTCTTATTGACCGCCGAAGTCGTGATGAGGCCACAGGAGAGGTTGTATCGCTTGTCGGCCACCTCGGGGGTATGCGGATGGGGGACAAATATGAAAGAACAAAACCCCCAGTCAGCGAAGAACGCAAAGCCAAGAGACAAAAGATAGCTGATAAAGAAGAATTTGCCAAACTCAGAGGCAGTAGCCTGCTGTCAGAAGAGGTGGAGGATCTCACAGGTGTTCGATATAGGCCTAAGACTCGTGAAACCAAGTCAACATATGAAGTGCTACTAAGTTTTATCCAGGCTGCTATTGGAGATCAGCCTCGTGACATTCTCTGTGGTGCTGCAGATGAAGTGCTTGCTTCCCTAAAAGATGACAAAATGAAGGATAAAGAAAAACTGAAGGAGATTGTCTCTTTGCTTGGTGATATGCCTGATGAGAGATTTGCTCTTCTGGTCAACCTAGGAAAAAAGATTACTGACTATACCTTTGATAGAGACTACAGCAATGATGATGAGGTTATTGACGAAACCTATGGTGTGGCTGTCCAGTTTGATGAAGATGAAGAAGAGGAAAAAGAAGATTTCGACATGGTGCGCGAGTCCGAGTCTGAAGATGAAACTGAGGGAATGGTGGAGGCGGAAACAAACATGACCCTCCAGGGAGGGCTATCAGAGTCCCAGAAAGCCTCTAGCGACACACTACACCCACGCGACATTGATGCATTCTGGCTGCAACGTGAACTCAACAAGTACTATGCAGATGCCGAAGCATCAAGGTCCAAGTCTGAGGAGGTCCAGGAAATCCTCAAGAGTGCAAATGATGAGCGAGAGCTGGAGAACAAGTTGATGCTCTTGCTAGGGCATGACAAGTTCTCGTTCATCAGGCTGCTGCGTAAGAACCGTAACATGGTGCTGTACTGCACTTTACTGGCTACAGCTCAGAGCTCAAAGGAGAAAAAAGAGATTGAGGCTAAGATGGAGGCCGACCCTGACCTTGCTCAGATCCTACATGCCTTGAATGAGACAGACAAGGGAGATCTGATACAGGAGGAGAGAGCTAGAAAAGCTGCAAACAGGAAAGCTCGTATTGCTGCAGATCTCGATGCTCTAGAGTCTGATCAGACTAGGGGAGCAAGAAAGGTCCTCGATCTTGAAGAGCTGGCTTTCAAAGATGGCAGCCACCTGATGGCCAACAAGCAGTGCCAGCTACCTGTAGGAACCTTCCGTAAGCAGCGTCCAGGCAAGGGATACGAGGAGGTCCATGTTCCTGCCTTAAAGCCAAAACCATTTGAAACAGGAGAGCAATTGACGCCCATTACCTCTCTGCCAATGTACGCCCAAGCAGCATTTGAAGGCTACCCCACCCTGAACAGAATCCAAAGCCGATTGTGTGAAACAGCCTTAAACAGCGATGAAAATCTTCTGCTGTGTGCACCCACCGGTGCTGGTAAAACTAATGTTGCCCTCTTGACCATCTTGCGTGAGATCGGGAAACACATCAACTTGGATGGAACCATCAACACAGAGGAGTTCAAGATCATCTATGTCGCCCCCATGAGATCTCTTGTGCAGGAGATGGTACTCAACTTCTCAAAGCGCCTGAGTACTTATGGGTTGACAGTATCTGAACTCACCGGTGACCACAACTTGACAAAGGAGCAAATCCACGGCACCCAGATTATCGTCTGTACCCCAGAGAAATGGGACATCATCACTCGCAAGAGTGGAGAGCGCACATTCACCCAGCTTGTCCGCCTCATTATCATTGACGAAATCCACCTTCTCCATGATGACAGAGGACCTGTGCTAGAGTCTCTGGTCGCCAGGACAATAAGACAAATTGAGACCACACAGGAGCTTGTGCGGCTTGTGGGTCTGAGTGCGACCCTCCCCAACTATGAGGATGTTGCTACCTTCATGAGGGTGAACCCTGCAAAGGGCCTTTTCTTCTTCGATAACAGCTTTAGGCCCGTACCCCTGGAGCAGCAGTTTATTGGGATTACAGAGAAGAAGCCAATAAAAAGAATGCAGGCTACCAATGAGGTTGTTTATGAGAAAGTGGTGGAGCATGCTGGAAAGAATCAAGTACTTGTGTTTGTGCACTCTCGCAAGGAGACAGCCAAGACAGCCAAAGCTGTGCGTGACATGTGTCTAGAGCGGGACAGCCTGGGACTCTTCCTCAGAGAGGACTCTGCCAGTACTGAGGTCCTCAGGTCAGAAGCAGAGCAAGTGAAGAATGGCGAGCTAAAGGATCTGCTTCCTTACGGCTTTGCCATCCATCATGCCGGCATGTCACGCGTCGACAGGACCCTGGTGGAGGATTTGTTTGCTGACAGACACATTCAGGTGTTGGTGTCCACGGCAACGCTTGCTTGGGGCGTCAACTTGCCTGCACACACCGTCATCATCAAGGGGACTCAGGTGTACAGTCCAGAGAAGGGTCGATGGGTGGAGCTTGGAGCGCTGGACATCCTTCAGATGCTTGGTCGTGCTGGCCGGCCACAGTATGATACCAAGGGTGAAGGCATCTTGATCACTAGTCATGGCGAGCTCCAGTACTACCTTTCACTCATGAACCAGCAGCTTCCAGTAGAGAGCCAGTTTATTTCCAAGCTTGCTGATAACCTAAATGCAGAGGTTGTGCTTGGCTCAGTGCAGACGGCTAAGGATGCCGTTCACTGGTTAGGTTACACATACTTGTATATCCGCATGCTGCGTAATCCAGCACTCTACGGAATATCACATGATGAAATTGAAAAAGATCCTTTACTGGAGCAGAGAAGGGCAGATCTAATTCATTCAGCAGCATCCTTGCTCGACAAGAATAATCTTCTCAAGTATGACAAGAAGTCTGGAAACTTTCAGGTCACTGAGCTTGGACGCATTGCCAGTCACTACTACTTGACACATGAGACTGTTTCAACATTCAACAACTTGTTGAAGCCAACCTTAAGTGAGATTGAACTCTTTCGAGTATTTTCTCTTTCTTCAGAGTTCAAGTACATCAATGTCCGAGAGGAGGAGAAACTGGAGCTGAATAAGCTACTGGAGCGAGTTCCCATCCCTGTCAAAGAAAGTATTGAGGAGCCAAGTGCAAAGGTGAATGTACTGCTACAGTCTTTCATCTCCCAACTCAAGCTGGAAGGATTTGCACTCATGTCCGACATGGTGTACATCACACAGTCTGCAGGTCGTCTTGTCAGGGCCATTTTCGAGATCGTCCTCAACCGTGGCTGGGCCCAACTGGCTGACAAAGCTCTTTGTCTAAGCAAAATGATCGACAAGAGGATGTGGCTTTCCATGACACCATTACGACAGTTCAAAAAGATCCCCATGGAAGTTATCAAGAAGATTGAGAAGAAAGAGTTTCCCTGGGAGCGATACTATGATCTTGGACCTAATGAGATTGGAGAGCTGGTCCACATGCCCAAACTAGGGAAGACTCTTCACAAGCTTGTCCATCAGTTACCCAAGATGGAACTAGCGACACACATACAACCCATCACAAGATCTACTCTAAGTGTAGAGCTTACGGTCACGCCAGACTTCCAGTGGGACGAGAAGGTGCACGGTAACTCTGAGGCATTCTGGATCCTTGTGGAGGATGTTGACAGTGAGATCATCCTTCATCATGAGTACTTCTTGCTCAAAGCCAAATACGCTCAGGATGAGCACGTTGTCAAGTTCTTTGTTCCTGTTTTTGAGCCCCTGCCACCACAGTACTTCATACGTATTGTATCTGACAGATGGCTTGGCTCAGAGACGCAGCTTCCTGTGTCCTTCCGTCACCTCATTCTGCCTGAGAAGAACCAACCCCCCACAGAACTCTTGGACTTGCAGCCGCTGCCTGTATCAGCCCTCAGGAACCCTGCATTTGAGGCACTGTACAGGGACAAATTCCCTTACTTCAATCCCATTCAGACACAAGTTTTCAGTACATTATACGACTCTAGTGAGAATGTGTTCATTGGAGCACCGACTGGAAGTGGAAAAACTATCTGTGCAGAGTTTGCTGTATTGCGCTTTCTACAGCAGTCCCCAGAGGGCAGATGTGTGTATGTTACACCCATACAGGCACTTGCAGAGCAGGTCTACGCAGATTGGCAGAACAAGTTTGGTCTTCAGTTGGGCAAGAATGTTGTTATGTTGACAGGAGAGACAAGCGCTGACCTTAAACTCCTTGCCAAGGGTAATGTTGTTGTAAGCACTCCTGAGAAATGGGATGTCTTGTCTCGCCGATGGAAGCAGCGGAAGAATGTGCAGAATGTTTCACTATTCATCATGGATGAAGCACACCTCATTGGTGGTGATACAGGGCCTGTGATGGAAATCATCTGTTCTCGGATGCGTTACATCTCATCCCAGTTGGAAAGGACAATACGAATTGTGGCACTGAGTTCTTCGCTTGCCAATGCTAAGGATGTAGCCCAATGGCTGGGTGTGCCGTCCACAGGGTTGTTCAACTTCCATCCCAATGTCAGACCTGTTCCTTTGGAGCTACACATTCAGGGATTCAACATCACACACACTTCTTCCCGCCTGATCGCTATGACGAAGCCTGTGTACCAGGCCATCATGAAGCACTCCCCTAAGAAGCCTGCCGTCGTGTTTGTGCCGTCCAGACGTCAGACCAAGCTACTTGCTTTGGATATTCTTACCTTCAGTGGTGCAGATAATGAGCCACAACGTTTCCTCCATTGTACTGAAGATGATCTAAATCCGTTTGTCAGCCGTCTTACAGATAAGACCCTGAAGGAGACTGTAACGTATGGAATAGCATTCCTGCATGAGGGTCTCTCAGATGCAGAGGTGAAGATCGTCAATCAGCTCTTCACATCTGGTGCTATTCAGGTTGTGGTTGTGTCCCGCACTCTCTGCCTGTCAGTCAACCTCAGTGCACATCTTGTGGTAGTCATGGATACGCAGTTTTATGAAGGCAAAACTCACTCGTACGCTGATTACCCTGTAACAGACGTACTGCACATGATTGGTCACGCTAGCCGGCCACTCCTAGATGATGCTGGCAAAGCAGTTATTCTGTGCCAAGCGTCAAAGAAAGAATTTTTTAAGAAATTCCTCTATGAGCCTCTGCCAATCGAGTCTCATCTTGATCACACGTTACACGATCACTTCAATGCCGAGGTTGTGACAAAAACTATTGAAAACAAGCAGGATGCTGTGGACTACTTGACGTGGACTTTCCTGTATCGTCGCATGACCCTAAATCCCAACTACTACAACCTGCAAGGAGTAACACACCGACATCTTTCCGACCACATGTCCGAACTGGTGGAGAACACGCTGAACGACCTGGAACAGTCTAAGTGCGTGTCTGTTGAAGACGAAATGGATGTCACCCCTCTCAACCTCGGCATGATCGCCGCCTATTACTACATCAACTACACTACTATCGAGTTGTTCAGTGTCTCCCTGAACGCAAAGACGAAGCTGCGGGGCTTAGTCGAAATCATTTCATCGGCATCAGAATATGCACCACTTTCTATTAGACACCATGAAGAGGCCACACTCAAACAGCTGCTGAACCGCGTGCCTCACAAGATCACGAGTCCAAAGTTCAATGACCCGCACGTGAAGACCAACCTGTTGATCCAGGCTCACATGTCCCGGATGCAGCTATCTCCAGAACTCCAGTCTGACACGGAGCTCATTCTTAGCAAGGCGATGCGTCTCATCCAGGCGTGTGTAGATGTGCTCAGCAGTAATGGATGGTTGTCTCCAGCATTGGCAGCCATGGAGTTAGCGCAAATGGCCACACAAGCCATGTGGAGCAAGGATTCGTACTTGAAGCAGATCCCCCACTTTACACCAGATATCATCAAGCGCTGCGTGGAAAAGGAGGTGGAGTCTGTATTTGACATTATGGATCTTGATGACGAAGAGCGCAACAAGTTACTGAAGCTCGACGATGTACAGATGCAGGACGTCGCCCGCTTCTGTAATAGATACCCCAACATCGAGCTGTCTTTTGAGATCCCAGACAAAAACCAGATCAAGACCGGTCGCCCCGTAAACATGACGGTGGACCTGGAGCGAGAGGACGAGCAGCCTGGCGCTGTCATCGCGCCATTCTTCCCGCAGAAGCGCGAGGAGGGCTGGTGGCTAGTCATCGGCGACACAAAGGCCAACAGTTTGATCTCCATCAAGAGGCTGACCTTGCAGCAGAAGGCCAAGGTCAAGCTGGACTTCGTGGCGCCCTCGTCGCCCGGGACGTACTCGTATGTGTTGTTCTTCATGTGTGACGCGTACATGGGCTGCGATCAGGAGTACCCCTTCAAGATAACCGTTGAGGAAGCGGGCAGTGACGATGATGATGATGACGACAGCGATGAGAGTGATTAG

Transcript

rna-XM_032366754.2

TGAAGAGACGCAAGAATGACGTttggccgccatgttggaaGAGATGGACGAGGGACGAAAAAACTGACGAACTTTCATCAAACGTTTTTACCTTAATAACCTAATAAATCCCTAAAAAACACATAAACTACAAGAGTGAAGGTCTAATATGGCTGATGCTACAGCTAGGTCGCTGCAATATGAGTACAAAGCGAACTCCAATCTTGTGTTGCAAGCTGATCGGTCTCTTATTGACCGCCGAAGTCGTGATGAGGCCACAGGAGAGGTTGTATCGCTTGTCGGCCACCTCGGGGGTATGCGGATGGGGGACAAATATGAAAGAACAAAACCCCCAGTCAGCGAAGAACGCAAAGCCaaGAGACAAAAGATAGCTGATAAAGAAGAATTTGCCAAACTCAGAGGCAGTAGCCTGCTGTCAGAAGAGGTGGAGGATCTCACAGGTGTTCGATATAGGCCTAAGACTCGTGAAACCAAGTCAACATATGAAGTGCTACTAAGTTTTATCCAGGCTGCTATTGGAGATCAGCCTCGTGACATTCTCTGTGGTGCTGCAGATGAAGTGCTTGCTTCCCTaaaagatgacaaaatgaAGgataaagaaaaactgaaGGAGATTGTCTCTTTGCTTGGTGATATGCCTGATGAGAGATTTGCTCTTCTGGTCAACCTAGGAAAAAAGATTACTGACTATACCTTTGATAGAGACTACAGCAATGATGaTGAGGTTATTGACGAAACCTATGGTGTGGCTGTCCAGtttgatgaagatgaagaagagGAAAAAGAAGATTTCGACATGGTGCGCGAGTCCGAGTCTGAAGATGAAACTGAGGGAATGGTGGAGGCGGAAACAAACATGACCCTCCAGGGAGGGCTATCAGAGTCCCAGAAAGCCTCTAGCGACACACTACACCCACGCGACATTGATGCATTCTGGCTGCAACGTGAACTCAACAAGTACTATGCAGATGCCGAAGCATCAAGGTCCAAGTCTGAGGAGGTCCAGGAAATCCTCAAGAGTGCAAATGATGAGCGAGAGCTGGAGAACAAGTTGATGCTCTTGCTAGGGCATGACAAGTTCTCGTTCATCAGGCTGCTGCGTAAGAACCGTAACATGGTGCTGTACTGCACTTTACTGGCTACAGCTCAGAGCTCAAAGGAGAAAAAAGAGATTGAGGCTAAGATGGAGGCCGACCCTGACCTTGCTCAGATCCTACATGCCTTGAATGAGACAGACAAGGGAGATCTGATACAGGAGGAGAGAGCTAGAAAAGCTGCAAACAGGAAAGCTCGTATTGCTGCAGATCTCGATGCTCTAGAGTCTGATCAGACTAGGGGAGCAAGAAAGGTCCTCGATCTTGAAGAGCTGGCTTTCAAAGATGGCAGCCACCTGATGGCCAACAAGCAGTGCCAGCTACCTGTAGGAACCTTCCGTAAGCAGCGTCCAGGCAAGGGATACGAGGAGGTCCATGTTCCTGCCTTAAAGCCAAAACCATTTGAAACAGGAGAGCAATTGACGCCCATTACCTCTCTGCCAATGTACGCCCAAGCAGCATTTGAAGGCTACCCCACCCTGAACAGAATCCAAAGCCGATTGTGTGAAACAGCCTTAAACAGCGATGAAAATCTTCTGCTGTGTGCACCCACCGGTGCTGGTAAAACTAATGTTGCCCTCTTGACCATCTTGCGTGAGATCGGGAAACACATCAACTTGGATGGAACCATCAACACAGAGGAGTTCAAGATCATCTATGTCGCCCCCATGAGATCTCTTGTGCAGGAGATGGTACTCAACTTCTCAAAGCGCCTGAGTACTTATGGGTTGACAGTATCTGAACTCACCGGTGACCACAACTTGACAAAGGAGCAAATCCACGGCACCCAGATTATCGTCTGTACCCCAGAGAAATGGGACATCATCACTCGCAAGAGTGGAGAGCGCACATTCACCCAGCTTGTCCGCCTCATTATCATTGACGAAATCCACCTTCTCCATGATGACAGAGGACCTGTGCTAGAGTCTCTGGTCGCCAGGACAATAAGACAAATTGAGACCACACAGGAGCTTGTGCGGCTTGTGGGTCTGAGTGCGACCCTCCCCAACTATGAGGATGTTGCTACCTTCATGAGGGTGAACCCTGCAAAGGGCCTTTTCTTCTTCGATAACAGCTTTAGGCCCGTACCCCTGGAGCAGCAGTTTATTGGGATTACAGAGAAGAAGCCAATAAAAAGAATGCAGgcTACCAATGAGGTTGTTTATGAGAAAGTGGTGGAGCATGCTGGAAAGAATCAAGTACTTGTGTTTGTGCACTCTCGCAAGGAGACAGCCAAGACAGCCAAAGCTGTGCGTGACATGTGTCTAGAGCGGGACAGCCTGGGACTCTTCCTCAGAGAGGACTCTGCCAGTACTGAGGTCCTCAGGTCAGAAGCAGAGCAAGTGAAGAATGGCGAGCTAAAGGATCTGCTTCCTTACGGCTTTGCCATCCATCATGCCGGCATGTCACGCGTCGACAGGACCCTGGTGGAGGATTTGTTTGCTGACAGACACATTCAGGTGTTGGTGTCCACGGCAACGCTTGCTTGGGGCGTCAACTTGCCTGCACACACCGTCATCATCAAGGGGACTCAGGTGTACAGTCCAGAGAAGGGTCGATGGGTGGAGCTTGGAGCGCTGGACATCCTTCAGATGCTTGGTCGTGCTGGCCGGCCACAGTATGATACCAAGGGTGAAGGCATCTTGATCACTAGTCATGGCGAGCTCCAGTACTACCTTTCACTCATGAACCAGCAGCTTCCAGTAGAGAGCCAGTTTATTTCCAAGCTTGCTGATAACCTAAATGCAGAGGTTGTGCTTGGCTCAGTGCAGACGGCTAAGGATGCCGTTCACTGGTTAGGTTACACATACTTGTATATCCGCATGCTGCGTAATCCAGCACTCTACGGAATATCACatgatgaaattgaaaaaGATCCTTTACTGGAGCAGagaaGGGCAGATCTAATTCATTCAGCAGCATCCTTGCTCGACAAGAATAATCTTCTCAAGTATGACAAGAAGTCTGGAAACTTTCAGGTCACTGAGCTTGGACGCATTGCCAGTCACTACTACTTGACACATGAGACTGTTTCAACATTCAACAACTTGTTGAAGCCAACCTTAAGTGAGATTGAACTCTTTCGAGTATTTTCTCTTTCTTCAGAGTTCAAGTACATCAATGTCCGAGAGGAGGAGAAACTGGAGCTGAATAAGCTACTGGAGCGAGTTCCCATCCCTGTCAAAGAAAGTATTGAGGAGCCAAGTGCAAAGGTGAATGTACTGCTACAGTCTTTCATCTCCCAACTCAAGCTGGAAGGATTTGCACTCATGTCCGACATGGTGTACATCACACAGTCTGCAGGTCGTCTTGTCAGGGCCATTTTCGAGATCGTCCTCAACCGTGGCTGGGCCCAACTGGCTGACAAAGCTCTTTGTCTAAGCAAAATGATCGACAAGAGGATGTGGCTTTCCATGACACCATTACGACAGTTCAAAAAGATCCCCATGGAAGTTATCAAGAAGATTGAGAAGAAAGAGTTTCCCTGGGAGCGATACTATGATCTTGGACCTAATGAGATTGGAGAGCTGGTCCACATGCCCAAACTAGGGAAGACTCTTCACAAGCTTGTCCATCAGTTACCCAAGATGGAACTAGCGACACACATACAACCCATCACAAGATCTACTCTAAGTGTAGAGCTTACGGTCACGCCAGACTTCCAGTGGGACGAGAAGGTGCACGGTAACTCTGAGGCATTCTGGATCCTTGTGGAGGATGTTGACAGTGAGATCATCCTTCATCATGAGTACTTCTTGCTCAAAGCCAAATACGCTCAGGATGAGCACGTTGTCAAGTTCTTTGTTCCTGTTTTTGAGCCCCTGCCACCACAGTACTTCATACGTATTGTATCTGACAGATGGCTTGGCTCAGAGACGCAGCTTCCTGTGTCCTTCCGTCACCTCATTCTGCCTGAGAAGAACCAACCCCCCACAGAACTCTTGGACTTGCAGCCGCTGCCTGTATCAGCCCTCAGGAACCCTGCATTTGAGGCACTGTACAGGGACAAATTCCCTTACTTCAATCCCATTCAGACACAAGTTTTCAGTACATTATACGACTCTAGTGAGAATGTGTTCATTGGAGCACCGACTGGAAGTGGAAAAACTATCTGTGCAGAGTTTGCTGTATTGCGCTTTCTACAGCAGTCCCCAGAGGGCAGATGTGTGTATGTTACACCCATACAGGCACTTGCAGAGCAGGTCTACGCAGATTGGCAGAACAAGTTTGGTCTTCAGTTGGGCAAGAATGTTGTTATGTTGACAGGAGAGACAAGCGCTGACCTTAAACTCCTTGCCAAGGGTAATGTTGTTGTAAGCACTCCTGAGAAATGGGATGTCTTGTCTCGCCGATGGAAGCAGCGGAAGAATGTGCAGAATGTTTCACTATTCATCATGGATGAAGCACACCTCATTGGTGGTGATACAGGGCCTGTGATGGAAATCATCTGTTCTCGGATGCGTTACATCTCATCCCAGTTGGAAAGGACAATACGAATTGTGGCACTGAGTTCTTCGCTTGCCAATGCTAAGGATGTAGCCCAATGGCTGGGTGTGCCGTCCACAGGGTTGTTCAACTTCCATCCCAATGTCAGACCTGTTCCTTTGGAGCTACACATTCAGGGATTCAACATCACACACACTTCTTCCCGCCTGATCGCTATGACGAAGCCTGTGTACCAGGCCATCATGAAGCACTCCCCTAAGAAGCCTGCCGTCGTGTTTGTGCCGTCCAGACGTCAGACCAAGCTACTTGCTTTGGATATTCTTACCTTCAGTGGTGCAGATAATGAGCCACAACGTTTCCTCCATTGTACTGAAGATGATCTAAATCCGTTTGTCAGCCGTCTTACAGATAAGACCCTGAAGGAGACTGTAACGTATGGAATAGCATTCCTGCATGAGGGTCTCTCAGATGCAGAGGTGAAGATCGTCAATCAGCTCTTCACATCTGGTGCTATTCAGGTTGTGGTTGTGTCCCGCACTCTCTGCCTGTCAGTCAACCTCAGTGCACATCTTGTGGTAGTCATGGATACGCAGTTTTATGAAGGCAAAACTCACTCGTACGCTGATTACCCTGTAACAGACGTACTGCACATGATTGGTCACGCTAGCCGGCCACTCCTAGATGATGCTGGCAAAGCAGTTATTCTGTGCCAAGCGTCAAAGAAAGAATTTTTTAAGAAATTCCTCTATGAGCCTCTGCCAATCGAGTCTCATCTTGATCACACGTTACACGATCACTTCAATGCCGAGGTTGTGACAAAAACTATTGAAAACAAGCAGGATGCTGTGGACTACTTGACGTGGACTTTCCTGTATCGTCGCATGACCCTAAATCCCAACTACTACAACCTGCAAGGAGTAACACACCGACATCTTTCCGACCACATGTCCGAACTGGTGGAGAACACGCTGAACGACCTGGAACAGTCTAAGTGCGTGTCTGTTGAAGACGAAATGGATGTCACCCCTCTCAACCTCGGCATGATCGCCGCCTATTACTACATCAACTACACTACTATCGAGTTGTTCAGTGTCTCCCTGAACGCAAAGACGAAGCTGCGGGGCTTAGTCGAAATCATTTCATCGGCATCAGAATATGCACCACTTTCTATTAGACACCATGAAGAGGCCACACTCAAACAGCTGCTGAACCGCGTGCCTCACAAGATCACGAGTCCAAAGTTCAATGACCCGCACGTGAAGACCAACCTGTTGATCCAGGCTCACATGTCCCGGATGCAGCTATCTCCAGAACTCCAGTCTGACACGGAGCTCATTCTTAGCAAGGCGATGCGTCTCATCCAGGCGTGTGTAGATGTGCTCAGCAGTAATGGATGGTTGTCTCCAGCATTGGCAGCCATGGAGTTAGCGCAAATGGCCACACAAGCCATGTGGAGCAAGGATTCGTACTTGAAGCAGATCCCCCACTTTACACCAGATATCATCAAGCGCTGCGTGGAAAAGgAGGTGGAGTCTGTATTTGACATTATGGATCTTGATGACGAAGAGCGCAACAAGTTACTGAAGCTCGACGATGTACAGATGCAGGACGTCGCCCGCTTCTGTAATAGATACCCCAACATCGAGCTGTCTTTTGAGATCCCAGACAAAAACCAGATCAAGACCGGTCGCCCCGTAAACATGACGGTGGACCTGGAGCGAGAGGACGAGCAGCCTGGCGCTGTCATCGCGCCATTCTTCCCGCAGAAGCGCGAGGAGGGCTGGTGGCTAGTCATCGGCGACACAAAGGCCAACAGTTTGATCTCCATCAAGAGGCTGACCTTGCAGCAGAAGGCCAAGGTCAAGCTGGACTTCGTGGCGCCCTCGTCGCCCGGGACGTACTCGTATGTGTTGTTCTTCATGTGTGACGCGTACATGGGCTGCGATCAGGAGTACCCCTTCAAGATAACCGTTGAGGAAGCGGGcagtgacgatgatgatgatgacgacagcGATGAGAGTGATTAGACGGAGACGATGATGACAGTGATTAGACGGAGACGATGATGACAGTGATTAGACGGAGACGATGAGGACAGTGATTAGTAAATAGACAGAAGCATCACCACGTGGAACAGGGAGACGGGTGGAATAGATAAGGTCGGCTGTGATGACGAAGGTAATGACGacggcgatgatgatgacgacaatgatgataaatgagacgaggacggtgatgatgataacgacgACAGCGATGAGAGTGATTAGACGGAGACGACGATGAGAGTGACGAGTAAATAGACAGAAGCATTACCTTCACGTGGAACAGGGAGATGGGTGGAATGGATAAGGTcggggatgatgatgatgacgaagaTAATGACGacggcgatgatgatgacgacaatgatgataaatgagacgaggacggtgatgatgatgatgacgaaaatgatgatgatgacgacaaaGATGATAAATGAGACGACgacgacaatgatgatgaatgaGCCGACGTTGATAATGACCAGCATGTTAGTGATAATGGTAGTAGTTGTGTTTGTGATCAGCAAACACTGCTGTTGATGTATATGAGTGTTATGTTAATGATGCATTATTTAATAAAATGCATGGTAAACCGATATCACCCATAGACTGGGAATCAAGGTAGAGCGGTTTCTTCGTAGCAAAAGAGAGACACGGTTAAGACGGCTTGTAATATTAGATGGCGAGGATTAGATGCTGTATAGTCACTTATGTTTCGTGATAGAAAGGAAAAGTAAAGCGGTGTTACTAGATAAGTGTTAGTATGCAGGAGACTGGATCTGGTAATGTTCTTATCGCTTTGTAAACCTGTCAAAATCCGCAGAACGATCAAAAGATGAATGCCACATTTTGTATATTGTAAATTGCATGTAACAATTCATCTGCCTGTTACTGTACGTTTGTAATAAATTACTTCTCTTA

Protein

XP_032222645.2

MADATARSLQYEYKANSNLVLQADRSLIDRRSRDEATGEVVSLVGHLGGMRMGDKYERTKPPVSEERKAKRQKIADKEEFAKLRGSSLLSEEVEDLTGVRYRPKTRETKSTYEVLLSFIQAAIGDQPRDILCGAADEVLASLKDDKMKDKEKLKEIVSLLGDMPDERFALLVNLGKKITDYTFDRDYSNDDEVIDETYGVAVQFDEDEEEEKEDFDMVRESESEDETEGMVEAETNMTLQGGLSESQKASSDTLHPRDIDAFWLQRELNKYYADAEASRSKSEEVQEILKSANDERELENKLMLLLGHDKFSFIRLLRKNRNMVLYCTLLATAQSSKEKKEIEAKMEADPDLAQILHALNETDKGDLIQEERARKAANRKARIAADLDALESDQTRGARKVLDLEELAFKDGSHLMANKQCQLPVGTFRKQRPGKGYEEVHVPALKPKPFETGEQLTPITSLPMYAQAAFEGYPTLNRIQSRLCETALNSDENLLLCAPTGAGKTNVALLTILREIGKHINLDGTINTEEFKIIYVAPMRSLVQEMVLNFSKRLSTYGLTVSELTGDHNLTKEQIHGTQIIVCTPEKWDIITRKSGERTFTQLVRLIIIDEIHLLHDDRGPVLESLVARTIRQIETTQELVRLVGLSATLPNYEDVATFMRVNPAKGLFFFDNSFRPVPLEQQFIGITEKKPIKRMQATNEVVYEKVVEHAGKNQVLVFVHSRKETAKTAKAVRDMCLERDSLGLFLREDSASTEVLRSEAEQVKNGELKDLLPYGFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWVELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLMNQQLPVESQFISKLADNLNAEVVLGSVQTAKDAVHWLGYTYLYIRMLRNPALYGISHDEIEKDPLLEQRRADLIHSAASLLDKNNLLKYDKKSGNFQVTELGRIASHYYLTHETVSTFNNLLKPTLSEIELFRVFSLSSEFKYINVREEEKLELNKLLERVPIPVKESIEEPSAKVNVLLQSFISQLKLEGFALMSDMVYITQSAGRLVRAIFEIVLNRGWAQLADKALCLSKMIDKRMWLSMTPLRQFKKIPMEVIKKIEKKEFPWERYYDLGPNEIGELVHMPKLGKTLHKLVHQLPKMELATHIQPITRSTLSVELTVTPDFQWDEKVHGNSEAFWILVEDVDSEIILHHEYFLLKAKYAQDEHVVKFFVPVFEPLPPQYFIRIVSDRWLGSETQLPVSFRHLILPEKNQPPTELLDLQPLPVSALRNPAFEALYRDKFPYFNPIQTQVFSTLYDSSENVFIGAPTGSGKTICAEFAVLRFLQQSPEGRCVYVTPIQALAEQVYADWQNKFGLQLGKNVVMLTGETSADLKLLAKGNVVVSTPEKWDVLSRRWKQRKNVQNVSLFIMDEAHLIGGDTGPVMEIICSRMRYISSQLERTIRIVALSSSLANAKDVAQWLGVPSTGLFNFHPNVRPVPLELHIQGFNITHTSSRLIAMTKPVYQAIMKHSPKKPAVVFVPSRRQTKLLALDILTFSGADNEPQRFLHCTEDDLNPFVSRLTDKTLKETVTYGIAFLHEGLSDAEVKIVNQLFTSGAIQVVVVSRTLCLSVNLSAHLVVVMDTQFYEGKTHSYADYPVTDVLHMIGHASRPLLDDAGKAVILCQASKKEFFKKFLYEPLPIESHLDHTLHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRMTLNPNYYNLQGVTHRHLSDHMSELVENTLNDLEQSKCVSVEDEMDVTPLNLGMIAAYYYINYTTIELFSVSLNAKTKLRGLVEIISSASEYAPLSIRHHEEATLKQLLNRVPHKITSPKFNDPHVKTNLLIQAHMSRMQLSPELQSDTELILSKAMRLIQACVDVLSSNGWLSPALAAMELAQMATQAMWSKDSYLKQIPHFTPDIIKRCVEKEVESVFDIMDLDDEERNKLLKLDDVQMQDVARFCNRYPNIELSFEIPDKNQIKTGRPVNMTVDLEREDEQPGAVIAPFFPQKREEGWWLVIGDTKANSLISIKRLTLQQKAKVKLDFVAPSSPGTYSYVLFFMCDAYMGCDQEYPFKITVEEAGSDDDDDDDSDESD

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75643	U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=SNRNP200 PE=1 SV=2
Q6P4T2	U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1
F1LNJ2	U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001413 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18149 all species →	Helicase_PWI	N-terminal helicase PWI domain	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF02889 all species →	Sec63	Sec63 Brl domain	Family	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF21188 all species →	BRR2_plug	Pre-mRNA-splicing helicase BRR2 plug domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041094 all species →	Domain	Brr2, N-terminal helicase PWI domain	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR050474 all species →	Family	Helicase Hel308/SKI2	Interproscan
IPR004179 all species →	Domain	Sec63 domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR048863 all species →	Domain	Pre-mRNA-splicing helicase BRR2-like, plug domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47961 all species →	DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12854	SNRNP200, BRR2; pre-mRNA-splicing helicase BRR2	EC:5.6.2.6	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032222645.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

16Conditions

40.7Max TPM

29.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	31.95	36.95
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	21.93	29.69
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	21.31	23.36
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	26.47	32.50
whole 6 week old aboral regenerate · regenerate uncut	3	3	19.00	20.38
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	32.27	33.73
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	28.27	31.74
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	35.01	39.14
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	31.62	40.73
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	38.40	39.14
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	29.01	32.74
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	30.91	33.91
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	32.58	36.03
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	37.61	40.56
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	30.66	34.62
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	24.39	31.94

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	36.95
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	31.77
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	27.13
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	29.69
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	18.52
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	17.57
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	23.36
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	21.16
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	19.41
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	32.50
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	26.72
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	20.20
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	20.38
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	20.17
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	16.45
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	33.73
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	32.47
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	30.62
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	31.74
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	27.73
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	25.35
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	39.14
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	35.73
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	30.16
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	40.73
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	31.20
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	22.92
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	39.14
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	38.29
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	37.77
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	32.74
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	29.07
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	25.23
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	33.91
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	29.91
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	28.92
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	36.03
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	32.33
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	29.38
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	40.56
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	36.82
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	35.44
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	34.62
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	31.57
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	25.78
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	31.94
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	24.28
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	16.94

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.