Genomic Location: NC_064035.1:14209635...14252702
NR annotation: XP_032222733.2, polycystic kidney disease 1-related protein isoform X1 [Nematostella vectensis]
| CDS | |||||
| LOC5521702 | |||||
| Transcript |
| rna-XM_032366842.2 |
| Protein |
| XP_032222733.2 |
| Uniprot term | Description |
|---|---|
| B8UU59 | Polycystin-1-related protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1 |
| O08852 | Polycystin-1 OS=Mus musculus OX=10090 GN=Pkd1 PE=1 SV=2 |
| Q7Z443 | Polycystin-1-like protein 3 OS=Homo sapiens OX=9606 GN=PKD1L3 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00801 | PKD | PKD domain | Domain | Interproscan |
| PF01477 | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| PF08016 | PKD_channel | Polycystin cation channel | Family | Interproscan |
| PF01825 | GPS | GPCR proteolysis site, GPS, motif | Motif | Interproscan |
| PF02010 | REJ | REJ domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051223 | Family | Polycystin | Interproscan |
| IPR022409 | Domain | PKD/Chitinase domain | Interproscan |
| IPR000601 | Domain | PKD domain | Interproscan |
| IPR001024 | Domain | PLAT/LH2 domain | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR002889 | Domain | Carbohydrate-binding WSC | Interproscan |
| IPR000434 | Family | Polycystic kidney disease type 1 protein | Interproscan |
| IPR014010 | Domain | REJ domain | Interproscan |
| IPR000203 | Conserved_site | GPS motif | Interproscan |
| IPR013122 | Domain | Polycystin cation channel, PKD1/PKD2 | Interproscan |
| IPR035986 | Homologous_superfamily | PKD domain superfamily | Interproscan |
| IPR046338 | Homologous_superfamily | GAIN domain superfamily | Interproscan |
| IPR002859 | Domain | PKD/REJ-like domain | Interproscan |
| IPR036392 | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10877 | POLYCYSTIN FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005262 | Molecular Function | calcium channel activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0050982 | Biological Process | detection of mechanical stimulus | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04987 | PKD1L1; polycystin 1L1 | - | Ion channels | ko04040 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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