Gene detail

Detailed information of XP_032223477.2 in Nematostella vectensis

Genomic Location: NC_064036.1:15715869...15732590
NR annotation: XP_032223477.2, TBC1 domain family member 9 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5522133

ATGTGGGTCCGACCTGAAGATGTTTTACTCGCTAATGCTCTGTGGGCCACAGAAAGAGCGAATCCGTACTTTGTGATGCAAAGACGGAAGGGTCACGGAGGCGGCGGGCTAACTTCTCTTTTAATCGGAACATTAGATAATGTTCTGGATTCAAAGCCAGCACCATTTCGCATATTACTCCAGTTGGCAAATTCTGATGTTAGTTATGTGATATCTAGTGCATCTTCCTTTAAAGAAATAGAGTCAGATTGGGAATGGCTTACCAAATACCTCCTCGAAACTCTCTCAAATATTGACAGTGATGATGACATCAAAGACTTTGTGAAAGCTAAAATAGAAAGTCTTGTTGCAAACTGTGAACCTGATGAAGACACCTCAACAATTGAGCAAGATACGGAGACATCAAAATTCAAGTCAGCCAGCAACAGGTTTCACAGGCTTTTCAATATGCCAGAACAAGACAAACTTGTCAACTACTATTCCTGTAGTTATTGGAAAGGTAGAGTGCCTCGTCAAGGCTGGCTTTACCTCTCTGTCAATCATCTGTGTTTCTACTCCTTCCTGATGGGGAAAGAGGCCCGCCTTGTTATAAGATGGACTGATGTAACATCATTAGAGAGAACCAATAGTGTACTGCTACCTGATGGCATCAAGGTCGCAACACGTGATGGCGAGTTTTGTTTCTCACTACTGCTGCACCCAACTGAAACGTTTGGTCTTATGGAGCAGCTGGCAAATCTTGCCATGAGACAATTACTTTCCCAAGAGGGGTTTGAGCAAGACAAGTCTCTTCCTATTTTAACTAAAAATCAGGGTAAAACAATGAAAAAAGTACCGACTCTGAAGAGAGACCTTGATGCTCGAGCTCAGAGTGAATACTACAGGAATCTTTTCCGGCTACCAGTTGAAGAAAAACTAGATGGTCACTGCGAGTGCACGCTGTGGAGCCCTCATAACAAAGCTCATGTTTGGGGAACACTTTATTGCTCCCCAAACTTTCTATGTTTTAACAGCAAGATTCGTCAGCTTTTGTCGGTGGTGGTTCCAATGAGAGAGATTACCTTGGTGGAGAAGGTGGACACGTCAGCATTAATACCCAATGCTTTGCACATCACTACTAGATCAAAGGCAAATTTCCTGTTTGCATCGCTGAGGGACAGAGACTACCTTACTCATCTGATATCAGACTTCCTTGCCAAGACGCCAGAACCAAAAGATATCGGCGGAGAATGGGAGCTTGCAGGTCGTGAGCAAAAGCCCAAGAAGAAGACAGAATTCCAGCCTCCTCTCACCCAAGTATTCAGTAGTACACCCACAGACCAGATCACGGCCAAGGAAACGGTCAAGGAACATTTGTGGAGGTTGCATCTGGCTGAATACGGGAGAGGCGTCTGTATGTACCGCACTGTGAAGACGCACGAGTTAATCCTAAAGGGCATCCCTGATAACCTCCGTGCTGAGATATGGCTTATATTCTCCGGTGCTATTAACGAGATCGAGACGCACCCTGGGTACTATGTATCTCTAGTAGAGCAGTGCGAAGGCAAGTCATCTCTTGCTTTCGACGAGATTGAAAGGGATCTGCACAGATCCCTCCCTGAACACCCAGCCTTTCAGTCCGACGTCGGAATAGGAGCCCTGCGAAGAGTGCTGACCGCCTATGCTTGGAGGAACCCCAGTATAGGTTACTGCCAAGCAATGAATATCGTAGCCTCCGTGCTTCTACTCTACTGCACAGAGGAGCAGGCGTTCTGGCTGCTGGTAGCGGTCTGTGAGAGGCTTCTCCCTGACTACTACAACACGAAAGTTGTCGGTGCCCTGGTCGATCAAGGAGTGTTTGAAGACTTGACACGTGACCATCTACCGGAGCTGTACGACCACCTAAAGGACCTCGGGATCCTCAACATGATCTCACTCTCTTGGTTCCTTACGTTGTTTCTCAGTGTGATGCCTTTTGTGTGCGCTGTGAACATAATCGACTGCTTCTTCTACGATGGAGCAAAGGTTCTCTTCCAAATCGCTTTGGCTTGTCTCGACGCCAACAGAACCAAGCTTTTATCAATAGAAGATGATGGAGAGGCCATGACCATATTAGGGGCGTACCTGGATCACGTGACAAACAGAGATTCTTCTATACCTGCGACTACAATGTCTGTTAATAATCGCAGCCTTGGAATTCCTTCTCCAGGGTTTTCGACATCAGTGGACGTGTCAAATCTCATACTAGAATCGTATCAGAAGTTTGGCTTCATCACCGCAGAGAACATCGAGTCAATGCGTAACACCCAGCGGCTGAAGGTTGTCCAGGGACTGGAAGATAGCATGCGTCGGAATGCTGTCAGGTCCATCGGGGCAGAGAGCTCGGATTTTGACCAGAAAGAGCTGGAGCAACTGTACGCTGTATTCAAGACGGGTCACATCCAGGCTCGTAACCGTGGCTTTAGCGAAGTAAAAGATTCGACATCATGGCAACAGCAGTATATCGACCTGTATGGCTTTGAACCACTCTTCGTTACGCTAACAAACTGGGGCAAGTGCGAGATCGCAGACACGCTAGCCAGACGCGCGTTCAAGGTGATTGCTGGCGACGACAGTGACCTGATCACCTTCAAAGGGCTCGTTTGGGGACTTGGAACCATTTGCAAGGGCGACGTGCAGCACCGTCTACGATTTATGTATAGAATGCACATTGCGCCCGCGATCACTGATGACTTGGAGGACAGCGATGGAATCGACACATGTAGTGAAGTCACTGAGGATGAGCAGGGGGCTGGTGTCGGGGCGTCTGAGCCAACAGGAATCCCAAAGACACAAAAAGACGTTCTTGTCCCAGACGAGGCGACTGTTAGCTCTAGTTTAAAAAGCCGCGAGTCTATTGACCGAATGCTGCGCTCAGACGAGGGCAACAGAGATGCTGTTGAGTTGCCACGAATGACCCAGGAGCAGTTTATTCACCTGTGGAAAACAATGTACTCCCTGTTTCGTGAACTGCCCAACGAACAACAAATGTACCAGGCAATAGCTACAGTCGGCAACATCCTGCTCAAACTTGGAGACTTCGCTCACGACCGGAATCTAATGACGGATAACAAATCAGCAGAAGAAACAGCCCAAAGCCTGGACTCTTCTCTCTCCGAGCGACTTGTCGAGTGTGCACCGACGCCATCCGAATCAGGCGCGTCATCACAAGCACTGGGGTCTTCGGCAGCTCCGAGTCTAACCGAAGTAGCCACGAATTCATCCGGACAATTATCCTCATCTTTTCCAAAGGGTTTGCCCGACCTCTCGGCCAGTCCAAACTTACCCGATGGTGTCACGAGTTTGTCGAGTTCGTCGTCGTTATTACGAGACATTCTTGCCGACGCTGTTCGAAGTAGCGAGTCTTCTCTTAGCAGCCCTGTACGGTCGACCAGCGGAGAAGATTACGTCATGGTTCAGAGTGAGGATGGCTTTAGTAGCCCAGAGCACCTCGACTTCGAGCAGAACGGCGTGGCAGAGACCCTAAACAGGGTCTACAACGAACTGGACTCGAGAGATCTCCGACTATCCGACCAAGAGCGCTCTGTCTCTATCCCGGGCCTTGGCGAGGTCTCCGCAATTAGTGATGTCACTTCCGGTGGCTTGGCTTTCGAGGACGAGGGGGATTACCCGGACAGACCGGGCTCTACTGGTTTGATTGACAGCCTGTGGTCTATCTCTTTTGAACAGTTTCTGGCTTCGATGCTCACCGAGCCTTACTTAGTACACTACTTCGAAGAACAGGTGGACGTGATAGAACGGTTAAAAAGGTTGAAAACGGAGGGTATTAGTAGTTTTAGTGCCGCTAATACAACCAACGAATAA

Transcript

rna-XM_032367586.2

GTGAGGACGTGGCGCGTGCGCGTTTTCTCCATCAAAATACAAGGTACACGAAATGGCTGTCGATTTGAGAAAATGACTTAAAATTAGCCGATTTAGCTCATAACACATCACCATGTGGGTCCGACCTGAAGATGTTTTACTCGCTAATGCTCTGTGGGCCACAGAAAGAGCGAATCCGTACTTTGTGATGCAAAGACGGAAGGGTCACGGAGGCGGCGGGCTAACTTCTCTTTTAATCGGAACATTAGATAATGTTCTGGATTCAAAGCCAGCACCATTTCGCATATTACTCCAGTTGGCAAATTCTGATGTTAGTTATGTGATATCTAGTGCATCTTCCTTTAAAGAAATAGAGTCAGATTGGGAATGGCTTACCAAATACCTCCTCGAAACTCTCTcaAATATTGACAgtgatgatgacatcaaagACTTTGTGAAAGCTAAAATAGAAAGTCTTGTTGCAAACTGTGAACCTGATGAAGACACCTCAACAATTGAGCAAGATACGGAGACATCAAAATTCAAGTCAGCCAGCAACAGGTTTCACAGGCTTTTCAATATGCCAGAACAAGACAAACTTGTCAACTACTATTCCTGTAGTTATTGGAAAGGTAGAGTGCCTCGTCAAGGCTGGCTTTACCTCTCTGTCAATCATCTGTGTTTCTACTCCTTCCTGATGGGGAAAGAGGCCCGCCTTGTTATAAGATGGACTGATGTAACATCATTAGAGAGAACCAATAGTGTACTGCTACCTGATGGCATCAAGGTCGCAACACGTGATGGCGAGTTTTGTTTCTCACTACTGCTGCACCCAACTGAAACGTTTGGTCTTATGGAGCAGCTGGCAAATCTTGCCATGAGACAATTACTTTCCCAAGAGGGGTTTGAGCAAGACAAGTCTCTTCCTATTTTAACTAAAAATCAGggtaaaacaatgaaaaaagtACCGACTCTGAAGAGAGACCTTGATGCTCGAGCTCAGAGTGAATACTACAGGAATCTTTTCCGGCTACCAGTTgaagaaaaactagatggtcacTGCGAGTGCACGCTGTGGAGCCCTCATAACAAAGCTCATGTTTGGGGAACACTTTATTGCTCCCCAAACTTTCTATGTTTTAACAGCAAGATTCGTCAGCTTTTGTCGGTGGTGGTTCCAATGAGAGAGATTACCTTGGTGGAGAAGGTGGACACGTCAGCATTAATACCCAATGCTTTGCACATCACTACTAGATCAAAGGCAAATTTCCTGTTTGCATCGCTGAGGGACAGAGACTACCTTACTCATCTGATATCAGACTTCCTTGCCAAGACGCCAGAACCAAAAGATATCGGCGGAGAATGGGAGCTTGCAGGTCGTGAGCAAAAGCCCAAGAAGAAGACAGAATTCCAGCCTCCTCTCACCCAAGTATTCAGTAGTACACCCACAGACCAGATCACGGCCAAGGAAACGGTCAAGGAACATTTGTGGAGGTTGCATCTGGCTGAATACGGGAGAGGCGTCTGTATGTACCGCACTGTGAAGACGCACGAGTTAATCCTAAAGGGCATCCCTGATAACCTCCGTGCTGAGATATGGCTTATATTCTCCGGTGCTATTAACGAGATCGAGACGCACCCTGGGTACTATGTATCTCTAGTAGAGCAGTGCGAAGGCAAGTCATCTCTTGCTTTCGACGAGATTGAAAGGGATCTGCACAGATCCCTCCCTGAACACCCAGCCTTTCAGTCCGACGTCGGAATAGGAGCCCTGCGAAGAGTGCTGACCGCCTATGCTTGGAGGAACCCCAGTATAGGTTACTGCCAAGCAATGAATATCGTAGCCTCCGTGCTTCTACTCTACTGCACAGAGGAGCAGGCGTTCTGGCTGCTGGTAGCGGTCTGTGAGAGGCTTCTCCCTGACTACTACAACACGAAAGTTGTCGGTGCCCTGGTCGATCAAGGAGTGTTTGAAGACTTGACACGTGACCATCTACCGGAGCTGTACGACCACCTAAAGGACCTCGGGATCCTCAACATGATCTCACTCTCTTGGTTCCTTACGTTGTTTCTCAGTGTGATGCCTTTTGTGTGCGCTGTGAACATAATCGACTGCTTCTTCTACGATGGAGCAAAGGTTCTCTTCCAAATCGCTTTGGCTTGTCTCGACGCCAACAGAACCAAGCTTTTATCAATAGAAGATGATGGAGAGGCCATGACCATATTAGGGGCGTACCTGGATCACGTGACAAACAGAGATTCTTCTATACCTGCGACTACAATGTCTGTTAATAATCGCAGCCTTGGAATTCCTTCTCCAGGGTTTTCGACATCAGTGGACGTGTCAAATCTCATACTAGAATCGTATCAGAAGTTTGGCTTCATCACCGCAGAGAACATCGAGTCAATGCGTAACACCCAGCGGCTGAAGGTTGTCCAGGGACTGGAAGATAGCATGCGTCGGAATGCTGTCAGGTCCATCGGGGCAGAGAGCTCGGATTTTGACCAGAAAGAGCTGGAGCAACTGTACGCTGTATTCAAGACGGGTCACATCCAGGCTCGTAACCGTGGCTTTAGCGAAGTAAAAGATTCGACATCATGGCAACAGCAGTATATCGACCTGTATGGCTTTGAACCACTCTTCGTTACGCTAACAAACTGGGGCAAGTGCGAGATCGCAGACACGCTAGCCAGACGCGCGTTCAAGGTGATTGCTGGCGACGACAGTGACCTGATCACCTTCAAAGGGCTCGTTTGGGGACTTGGAACCATTTGCAAGGGCGACGTGCAGCACCGTCTACGATTTATGTATAGAATGCACATTGCGCCCGCGATCACTGATGACTTGGAGGACAGCGATGGAATCGACACATGTAGTGAAGTCACTGAGGATGAGCAGGGGGCTGGTGTCGGGGCGTCTGAGCcaacaggaatcccaaagaCACAAAAAGACGTTCTTGTCCCAGACGAGGCGACTGTTAGCTCTAGTTTAAAAAGCCGCGAGTCTATTGACCGAATGCTGCGCTCAGACGAGGGCAACAGAGATGCTGTTGAGTTGCCACGAATGACCCAGGAGCAGTTTATTCACCTGTGGAAAACAATGTACTCCCTGTTTCGTGAACTGCCCAACGAACAACAAATGTACCAGGCAATAGCTACAGTCGGCAACATCCTGCTCAAACTTGGAGACTTCGCTCACGACCGGAATCTAATGACGGATAACAAATCAGCAGAAGAAACAGCCCAAAGCCTGGACTCTTCTCTCTCCGAGCGACTTGTCGAGTGTGCACCGACGCCATCCGAATCAGGCGCGTCATCACAAGCACTGGGGTCTTCGGCAGCTCCGAGTCTAACCGAAGTAGCCACGAATTCATCCGGACAATTATCCTCATCTTTTCCAAAGGGTTTGCCCGACCTCTCGGCCAGTCCAAACTTACCCGATGGTGTCACGAGTTTGTCGAGTTCGTCGTCGTTATTACGAGACATTCTTGCCGACGCTGTTCGAAGTAGCGAGTCTTCTCTTAGCAGCCCTGTACGGTCGACCAGCGGAGAAGATTACGTCATGGTTCAGAGTGAGGATGGCTTTAGTAGCCCAGAGCACCTCGACTTCGAGCAGAACGGCGTGGCAGAGACCCTAAACAGGGTCTACAACGAACTGGACTCGAGAGATCTCCGACTATCCGACCAAGAGCGCTCTGTCTCTATCCCGGGCCTTGGCGAGGTCTCCGCAATTAGTGATGTCACTTCCGGTGGCTTGGCTTTCGAGGACGAGGGGGATTACCCGGACAGACCGGGCTCTActggtttgattgacagccTGTGGTCTATCTCTTTTGAACAGTTTCTGGCTTCGATGCTCACCGAGCCTTACTTAGTACACTACTTCGAAGAACAGGTGGACGTGATAGAACGGTTAAAAAGGTTGAAAACGGAGGGTATTAGTAGTTTTAGTGCCGCTAATACAACCAACGAATAATTCACAAGAAGCTAGAGCTAGTAATGTTCACTGTTATTGACAGATGTGTGCTTTGCTCTAGTCATCTTTCCACAGTCATTCAGTTTGCGCCTCGGTATGCTGCCCTCGACTCCCTGGTTTACTGTACCTTCTTGTACTTCACTATTCTCGAGGATCTATTGTTCTTCAGAGGCGAGAAAGTCACACCGCTCTTCTTCGGTAGGGACCCTTACCGCCTGCAAGTAACGCTTGGACCCCGAATATTTTACTCCACGCCGAGGGTGCAACTTACATCTGATAATATATTGTCACTTTCTTGAGACGGCAACCCTCACATGAACATAAAAAGTGGCCGCTGGGTAGAGGTCTGGCACTATCTCATACAGTACCATGAATACGCATGAGTCCGGCCAAAAGATTTGCATTCCATGATTTTAGAAATATTGTACATTTAATCCATTCGCATGTGTGTTCCTCACTAAAACAAGTTTACCTCGTTCACTGAAAACGATAGATGTTACACCCACAGTAAAACAACCATTACCATTATCGCAACCATTTCCACCATGTCTGCATATGACTTAATTCCTTGCTCAAGAATTTACGTTGTTGATCGCGGGTTTCTTTCATCGATATactatttcaaaataaatgatCAAATTTTTGCTTGTGGCTAAAAGAAATCCTAATGTATGAACCATGGGGTAAATATAAGGGTTAACATTTATTTGAGCTGTGAATGTTACCTTACCTTAGAACGTACCTTACAATAGTAAACTAATTATACTTTGCAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZT07	TBC1 domain family member 9 OS=Homo sapiens OX=9606 GN=TBC1D9 PE=1 SV=2
Q3UYK3	TBC1 domain family member 9 OS=Mus musculus OX=10090 GN=Tbc1d9 PE=2 SV=2
Q66K14	TBC1 domain family member 9B OS=Homo sapiens OX=9606 GN=TBC1D9B PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003146 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02893 all species →	GRAM	GRAM domain	Domain	Interproscan
PF00566 all species →	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036014 all species →	Domain	TCB1D9/TCB1D9B, PH-GRAM domain 1	Interproscan
IPR004182 all species →	Domain	GRAM domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR000195 all species →	Domain	Rab-GAP-TBC domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036017 all species →	Domain	TCB1D9/TCB1D9B, PH-GRAM domain 2	Interproscan
IPR035969 all species →	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47666 all species →	PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_032223477.2. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19951	TBC1D8_9; TBC1 domain family member 8/9	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032223477.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

13.1Max TPM

8.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	10.12	11.16
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	7.42	10.62
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	7.57	7.84
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	8.10	9.18
whole 6 week old aboral regenerate · regenerate uncut	3	3	7.19	8.15
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	6.62	11.92
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	7.11	11.99
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	11.13	13.06
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	6.75	11.02
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	10.67	11.56
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	10.37	10.94
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	6.44	10.00
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	9.04	10.35
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	6.03	11.50
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	9.96	10.95
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	6.15	10.69

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	11.16
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.94
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.25
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.62
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.49
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	5.13
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.84
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.65
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.21
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.18
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.86
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.25
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	8.15
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.39
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.02
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	11.92
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	7.95
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.99
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	9.35
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	13.06
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	11.54
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	8.79
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	11.02
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.22
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	11.56
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	10.82
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	9.63
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	10.94
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	10.41
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	9.76
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	10.00
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.32
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	10.35
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	8.93
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.85
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	11.50
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	6.59
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	10.95
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	10.37
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.56
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	10.69
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	7.75
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.