Gene detail

Detailed information of XP_032226375.2 in Nematostella vectensis

Genomic Location: NC_064037.1:3114670...3122214
NR annotation: XP_032226375.2, polymerase delta-interacting protein 2 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_032370484.2

ATACTGTATGTACTTCATGGTTTTCTCAACATCCCTGgggttttctttttataagtGGAATCTCTTGGTATAATGATATATATTTCTGGTCCAGTCAACATTGAAATACATGTGAAATGAATATGTCATCCATTACTtatatcttatttttttagtatgaTTGTGATATTACATCAAGGTTccactgcattttttttttttagaaaaaaacttcCTAGTAAAGCTGTGCCATAGCAGGCCTCCAAATATTAgcggggcacgatacagaaacaataatttaagaaaacaTTAGGGGTACcctgccccaccccttgctacagTCCTGTAAATCACTAGTCTCTCACAATCCTTTGTTTTACCCCCTTTCcttctgtatttttttaaaaatgagtCATAGTTGTTCTACTGGGTTGATTAAAGCAGCTTATAGAAGACACAATAAATTATGGTGTGCATTGTATGTGTATTTCACTTTCTTTTGTTGGAAATATCTGATAGAAATTACCAGTCTCCCTCGCCCCAGCCTTCTCCCAACCCTGGACAAGCAACTAACCCTCCCTcacgggctacctgtgttttgGTCAGCGGTTCATCCGATGAAGAAGAAAAGATGTCTCGGctgtttgttgttttcagCGTGCGGCAATTTCGTCGACAATACTCGAgTAGCAGGCTGAGTGAAATCGGACGCTTTCAAGTTCCCAAAACCCAAGGAAAGTACGAAGGTGGCcagCTTTTTCTTCATAAGATATTTGGTTATCGTGGAGTTGTTCTTTTCCCGTGGGTGGCAAGAGTTTATGACAGAGACAGAGAGGCAAAGGATGATGAAAAGAATTTTGAGGACAACTCTGGTTTCAACAATATAGGGAAAGAGTTAAAAGCAGATTTACAGACATATTACCAGACTTTGATAGACACAAGAGATTCACCTTTCATTAGAACACAACCAGAAATTGTCACATTTCTTGGGCAAGAAAGAGACAATTCTCTGTACACAATCCCAGgtttgGACTACGTTAGTCATGAAGACATCCTACCATATATTATCAGTGATCCGTTCACCAAGCCCATCAACCATGAGTTGTTTGATAAATTTCTCTCCCCCGAGCCAGGAAGAGTCCCGCCGTTTACCTGCAAGGACTCCCTACAAGCCTGGCATGAGAAAAACCACAGATGGTTAGAACTTACAGATGTACACCGTGAGACCACCAACCAGATCAGAGTAACAGTTATGCCCTTCTTTATGGGGGCTAAGACAACACAGCCAAGCGCAAACTATTGGTGGAGATATTGCATTCGTCTGGAGAACCTTGGCCCAGAAACAGTCCAGCTACGTGAGCGACACTGGCGAATATTTAGCCTCTCTGGCACTCTCGAAACGGTCAGGGGAAGGGGTGTGGTTGGACAGGAACCGGTGCTTTCACCTCAACAGCCTGCCTTCCAGTACAGCAGCCATGTCTCATTACAAGCGCCTAGTGGACACATGTGGGGTACGTTTCGACTGGAAAGACCTGACGGCAGTACTTTTGACATTAGAATCCCGCCATTTTCACTCGAAAGCAAAGAGGAAGAAACACCTCCGACCAACATTATCGCTTGATCTCTCGCTATGCAGGGAATGGAGgaacaacacaaagaagaAGACTAATGTTGAGCGCAAAAACATTTGTGTGAATCATGATATTGTATATATAGTGATTTGTAGTGGAAGAGTAAAGAACTCAAGTTAGTATTTCATAAATGGAAACGCTAATACAATAAAATTCATTTGTTGGATAACTACTGTTCTTGGAGAATAGTGATACTAAAAGTTATGTTCACTCCTCAAACAGCTCTGAGCAGCAAACGTTTCAAACTCGCGACCTATGTCGCATATAAATGCATATGAATTTTCCCTTTATCCTAGAAGTATTTACATATGGAATACTCGCCCACCACTGGCATTGTTCGCTGCAACTctagaggtttttttttaagttcccGGCCGCGATCAGGCCCCACTAGTAGCTATATGTACCAAGGCTGCTTTATCATCATttatttgttgtattttttattatttatttctttaacATCCTGTATAGCCCATAGACTCGAGGATTAATAAATATGAATGTATGAATGAAAA

Protein

Uniprot

Uniprot term	Description
Q9Y2S7	Polymerase delta-interacting protein 2 OS=Homo sapiens OX=9606 GN=POLDIP2 PE=1 SV=1
Q91VA6	Polymerase delta-interacting protein 2 OS=Mus musculus OX=10090 GN=Poldip2 PE=1 SV=1
B6JD70	Protein ApaG OS=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=apaG PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08755	YccV-like	Hemimethylated DNA-binding protein YccV like	Domain	Interproscan
PF04379	DUF525	ApaG domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011722	Domain	Hemimethylated DNA-binding domain	Interproscan
IPR036767	Homologous_superfamily	ApaG domain superfamily	Interproscan
IPR007474	Domain	ApaG domain	Interproscan
IPR036623	Homologous_superfamily	Hemimethylated DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14289	F-BOX ONLY PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0042645	Cellular Component	mitochondrial nucleoid	Interproscan
GO:0070987	Biological Process	error-free translesion synthesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17809	POLDIP2; polymerase delta-interacting protein 2	-	Mitochondrial biogenesis	ko03029	deepkoala