Gene detail

Detailed information of XP_032228396.2 in Nematostella vectensis

Genomic Location: NC_064035.1:18691002...18702809
NR annotation: XP_032228396.2, heterogeneous nuclear ribonucleoprotein U isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5504239

ATGAGTGAACTAACTCCTGCTTCTGCCAAGAAGCTGAAAGTTGCCGAGTTAAGGGCAGAGCTTACCAAACTAGGCCTCGAAACTAAAGGCACCAAGCCAATCTTGTTGGAACGTTTACTCGGCGCCTTGAAGGATGGCGTTGTAGAGGGAAATGAAACGGAGGGCGGCCAGGAAGAGCTTAATACTTCCCAGGACAGCCAGGATGAATCTATGACGGCTGAAGAGACGGATGAACCTCCAAACGATGAGGAAATGTCCCAGGAAAAGGCTCCGATTGAAGAAAGTTCCAAAAACGATGAGACCCCCGCTGTGGCTGTTGATGAAGGCTTAAAAAAACAACCCGTAGCCGAGGAAAAAGCGGTAGATAATACTGCCGAATCTGTCGCCGAAGACAAAACTGAAGCTTCAGCCGAACCTACCCCAGAGGTTAAAACCGATGAAGGGTCAGTGGGTAAAGGCAGCGAAGAACCAGCGAAGAAAGAAGATTCCAGTGTTGCTGTGTCGGACGAGAAAGTGAAACAGGCAGATAAGGAGGGCAAACAAGACGAAGAAGCAATGGACCAAACAAATGTCGAAGCCGCGAAAACAGTAACCACCCCAACTAAAGAGGGTGATGAAGTCAAGGAGGAGAGTGTCCCCAGGGACGATCCTGAGATTCCTATTTATCTGAGTGATTCGATTGATTTTAGCACAGTGGAGCCCGAGCCTGATGTTGAACTAGATGACTCCCTTGTGGTCCTTGACAAATACAACTCAGACTTGTTCCTAAAGATAGCTCCAGAGGCTCTCAGCTTGACCATTCTCAAGGATGAAGGGTTCCCCTTCATGGCTGGAGGGGTAAGGGCAACATATGGCGCTACTAGTGGCAAGATATGCTTTGAATGCAAGCTAACAGAGACTGCTGAAGTTGATCTCCCTGACACTGAGGAACCAAAACACTTTGTCAGAGTTGGTTGGTCTTCTGACTCTGCTAACCTCCAATTGGGTGAAGTTGCCTTGTCTTATGGATTCGACAGCACAGGCAAGAAATGTACAAACAATGAGTTCACTGAGTTTGGCCAGACCTTTACAGCTGGGGATGTCATCACTTGTTATCTGGATTTAGAAAGCAGTCCAAAGCAAATCTCCTTCAGCAAGAATGGTGAAGATTTAGGCTCGGCATTTGACTTGCCCGAGGATGCCCAAGGGAAAGCTCTCTTTCCTCATGTGATGATTAAGAACATTGATTGTTCATTGAACTTTGGAACACAGGAGGAGGCATGGTTTGCACCCAAAGAGGGATTCCAATTCATACAGAATGCCGAGAAAGATACATTGGAACATGGCACAAGAGGTCCTGCATCTAAAGAAGAATGTGAGGTCATCATGATGATTGGCCTTCCTGCATCTGGTAAAACCACCTGGGTTAATAACCATCTAAATGAGCACCCAGACAAGAAATATAACATCCTTTCTACTTACTCTGTCATGGAGAAAATGAAGATTTTGGGTGCTCCCCGTAAGCAAGATGTTGGTGGTTATAGTAAACTGATGGATAAGGCCGCCAAGTCCCTCCACAGACTGTTTGAGATTGCACCAGCAAAGAAACGAAATTATATTCTAGATCAGACCAATGTGTACCTGGCTGCCCAAAAGAAAAAGATGAATCCCTTTGAGGGGTTTAACAGGAAAGCTGTGGTGTGCATTCCTACCATGGAGGAATTGAACAAGAGAGTAGAAGAGCGCAAGAAAGAAGGAGTTGAGCTACCATTCAATGCCATCTGTGATATGAAAAGGAGTTTCCGCATCCCAACGACTGAAGAATTCTTTGAAGAAGTCTTATACAGTGACCAAGAGCCCCCTACCTCTAAGAAGATTGTTGACCTGTATCACCGTGATGGCCAGGTTAACCGTATTCGCACCCACAGTGGCGGCCACTCAGACCCCCCTCGCAAGCGCACCCGCTGGGAAGACAGCTTCCCACACTCTGGCAGCTATAGAGGTCACTCCAGAGACAGGCATGATGACAGTCGTAATAGTGGTGGTTACGGAGGCTACAATCGCAGCCCCCAGCAGTATGGTGGCCGGGGTGGTTGGCAAAAGGATTATCAGAGAGGTGGAAGAGGAGGAGGGGGTTATGGTGGAGGGTACAATGATCGGCGTATGCAGCAAGGAGGATACGGAAACCGCAGTGGGGGTGGTTACAGAGGAGGAGGAGGGTATGGAGGTGGCGGCGGCGGCTATAGGGGTGGCGGAGGTTATGGTGGTGGTCATAGAGGAGGTGGAGGCTATGGGGGTGGTGGTCACAGAGGTGGCAGTTATAGTGGTTATAGAGGCAGCTATAAGAGCGGCGGCTACGGCCAAGGCAGCGGAGGCTACGGCCAAGGCAGCGGAGGCTACAACCGAAACACAGGATATAACACCTATGGTAGCTATGGCAATCAGAATCAACGGCAGCAGACAGCACAAGTGCAACAGTATTCACCCACAGCCACAGCCCAGCAAGCAGCATACTCCTCACCGCAGACGACCCAAGCCCAGCAGCAGGCAGCCTACACACAGTACTACCAGAACTACCAACAGCAGTACGGGCAGCAGTGGTCCGCCTACTACCAACAGCAGCAGCAGCAACAGCCCCAGGCGCAGCAAGGCCAGCAGACCACATACACCCAAAACTACACTGGATACACTGGCGGCTACTAG

Transcript

rna-XM_032372505.2

AAATCATGAGTGAACTAACTCCTGCTTCTGCCAAGAAGCTGAAAGTTGCCGAGTTAAGGGCAGAGCTTACCAAACTAGGCCTCGAAACTAAAGGCACCAAGCCAATCTTGTTGGAACGTTTACTCGGCGCCTTGAAGGATGGCGTTGTAGAGGGAAATGAAACGGAGGGCGGCCAGGAAGAGCTTAATACTTCCCAGGACAGCCAGGATGAATCTATGACGGCTGAAGAGACGGATGAACCTCCAAACGATGAGGAAATGTCCCAGGAAAAGGCTCCGATTGAAGAAAGTTCCAAAAACGATGAGACCCCCGCTGTGGCTGTTGATGAAGGCTTAAAAAAACAACCCGTAGCCGAGGAAAAAGCGGTAGATAATACTGCCGAATCTGTCGCCGAAGACAAAACTGAAGCTTCAGCCGAACCTACCCCAGAGGTTAAAACCGATGAAGGGTCAGTGGGTAAAGGCAGCGAAGAACCAGCGAAGAAAGAAGATTCCAGTGTTGCTGTGTCGGACGAGAAAGTGAAACAGGCAGATAAGGAGGGCAAACAAGACGAAGAAGCAATGGACCAAACAAATGTCGAAGCCGCGAAAACAGTAACCACCCCAACTAAAGAGGGTGATGAAGTCAAGGAGGAGAGTGTCCCCAGGGACGATCCTGAGATTCCTATTTATCTGAGTGATTCGATTGATTTTAGCACAGTGGAGCCCGAGCCTGATGTTGAACTAGATGACTCCCTTGTGGTCCTTGACAAATACAACTCAGACTTGTTCCTAAAGATAGCTCCAGAGGCTCTCAGCTTGACCATTCTCAAGGATGAAGGGTTCCCCTTCATGGCTGGAGGGGTAAGGGCAACATATGGCGCTACTAGTGGCAAGATATGCTTTGAATGCAAGCTAACAGAGACTGCTGAAGTTGATCTCCCTGACACTGAGGAACCAAAACACTTTGTCAGAGTTGGTTGGTCTTCTGACTCTGCTAACCTCCAATTGGGTGAAGTTGCCTTGTCTTATGGATTCGACAGCACAGGCAAGAAATGTACAAACAATGAGTTCACTGAGTTTGGCCAGACCTTTACAGCTGGGGATGTCATCACTTGTTATCTGGATTTAGAAAGCAGTCCAAAGCAAATCTCCTTCAGCAAGAATGGTGAAGATTTAGGCTCGGCATTTGACTTGCCCGAGGATGCCCAAGGGAAAGCTCTCTTTCCTCATGTGATGATTAAGAACATTGATTGTTCATTGAACTTTGGAACACAGGAGGAGGCATGGTTTGCACCCAAAGAGGGATTCCAATTCATACAGAATGCCGAGAAAGATACATTGGAACATGGCACAAGAGGTCCTGCATCTAAAGAAGAATGTGAGgtcATCATGATGATTGGCCTTCCTGCATCTGGTAAAACCACCTGGGTTAATAACCATCTAAATGAGCACCCAGACAAGAAATATAACATCCTTTCTACTTACTCTGTCATGGAGAAAATGAAGATTTTGGGTGCTCCCCGTAAGCAAGATGTTGGTGGTTATAGTAAACTGATGGATAAGGCCGCCAAGTCCCTCCACAGACTGTTTGAGATTGCACCAGCAAAGAAACGAAATTATATTCTAGATCAGACCAATGTGTACCTGGCTGCCCAAAAGAAAAAGATGAATCCCTTTGAGGGGTTTAACAGGAAAGCTGTGGTGTGCATTCCTACCATGGAGGAATTGAACAAGAGAGTAGAAGAGCGCAAGAAAGAAGGAGTTGAGCTACCATTCAATGCCATCTGTGATATGAAAAGGAGTTTCCGCATCCCAACGACTGAAGAATTCTTTGAAGAAGTCTTATACAGTGACCAAGAGCCCCCTACCTCTAAGAAGATTGTTGACCTGTATCACCGTGATGGCCAGGTTAACCGTATTCGCACCCACAGTGGCGGCCACTCAGACCCCCCTCGCAAGCGCACCCGCTGGGAAGACAGCTTCCCACACTCTGGCAGCTATAGAGGTCACTCCAGAGACAGGCATGATGACAGTCGTAATAGTGGTGGTTACGGAGGCTACAATCGCAGCCCCCAGCAGTATGGTGGCCGGGGTGGTTGGCAAAAGGATTATCAGAGAGGtggaagaggaggagggggtTATGGTGGAGGGTACAATGATCGGCGTATGCAGCAAGGAGGATACGGAAACCGCAGTGGGGGTGGTTacagaggaggaggagggtaTGGAGGTGGCGGCGGCGGCTATAGGGGTGGCGGAGGTTATGGTGGTGGTCATAGAGGAGGTGGAGGCTATGGGGGTGGTGGTCACAGAGGTGGCAGTTATAGTGGTTATAGAGGCAGCTATAAGAGCGGCGGCTACGGCCAAGGCAGCGGAGGCTACGGCCAAGGCAGCGGAGGCTACAACCGAAACACAGGATATAACACCTATGGTAGCTATGGCAATCAGAATCAACGGCAGCAGACAGCACAAGTGCAACAGTATTCACCCACAGCCACAGCCCAGCAAGCAGCATACTCCTCACCGCAGACGACCCAAGCCCAGCAGCAGGCAGCCTACACACAGTACTACCAGAACTACCAACAGCAGTACGGGCAGCAGTGGTCCGCCTACTaccaacagcagcagcagcaacagccCCAGGCGCAGCAAGGCCAGCAGACCACATACACCCAAAACTACACTGGATACACTGGCGGCTACTAGGGAATTAGCCACCGATACTGGTCGTAACAAGAATGGACCTTGTGACTTATGAGGAAGAATAATTGTTATAAACCAAAATGTGAATTCAGATGAAGAATCACATAACTTGTCCATgagacagtttttttttttcagcaataCTTGTTTAGCCAAATAAAAGGCTATTGTAAATATTTTGACCTTAATTGGTGAGTTTTATCATGATACAAACTTTTCTATAGCTAAGCTATTTGTACTCACATGAAAAACATACCTCGCATGCATTGTAGCAATTTCTCATTAGTAGATAGTTCAACCATTTAGCGATCACTGCATGTTTTTTGGGTGGTAATGTACATGATTTTTTAACTGCTAAATTAATAACTTCATGAATTACTTTTCATGCTGCCACTGATTTGTGTGTGGTTCTGAGGCATGTTGTGCAAATATCAAacgttttttaaataaaaacagtccTATCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VDM6	Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1
Q9BUJ2	Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens OX=9606 GN=HNRNPUL1 PE=1 SV=2
Q00839	Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens OX=9606 GN=HNRNPU PE=1 SV=6

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001454 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00622 all species →	SPRY	SPRY domain	Family	Interproscan
PF02037 all species →	SAP	SAP domain	Domain	Interproscan
PF13671 all species →	AAA_33	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003877 all species →	Domain	SPRY domain	Interproscan
IPR003034 all species →	Domain	SAP domain	Interproscan
IPR036361 all species →	Homologous_superfamily	SAP domain superfamily	Interproscan
IPR043136 all species →	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR035778 all species →	Domain	Heterogeneous nuclear ribonucleoprotein U, SPRY domain	Interproscan
IPR001870 all species →	Domain	B30.2/SPRY domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12381 all species →	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15047	HNRNPUL1, E1BAP5; heterogeneous nuclear ribonucleoprotein U-like protein 1	-	Influenza A	ko05164	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032228396.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

47TPM > 0

16Conditions

113.6Max TPM

51.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	53.51	62.07
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	35.92	49.08
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	46.69	53.51
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	51.72	61.74
whole 6 week old aboral regenerate · regenerate uncut	3	3	35.52	41.95
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	54.75	62.79
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	52.84	59.03
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	56.43	60.55
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	47.90	61.06
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	57.57	61.07
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	47.83	53.79
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	75.17	113.62
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	59.36	65.89
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	64.98	74.24
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	48.24	53.55
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	34.06	51.52

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	62.07
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	54.65
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	43.80
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	49.08
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	31.40
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	27.28
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	53.51
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	43.74
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	42.81
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	61.74
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	54.99
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	38.42
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	41.95
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	36.72
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	27.89
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	62.79
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	53.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	48.47
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	59.03
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	55.11
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	44.39
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	60.55
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	59.43
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	49.30
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	61.06
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	50.73
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	31.90
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	61.07
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	56.98
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	54.67
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	53.79
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	48.25
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	41.44
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	113.62
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	59.34
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	52.55
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	65.89
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	58.31
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	53.89
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	74.24
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	65.08
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	55.61
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	53.55
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	52.71
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	38.46
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	51.52
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	50.66
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.