Gene detail

Detailed information of XP_032230306.2 in Nematostella vectensis

Genomic Location: NC_064043.1:5047107...5056061
NR annotation: XP_001626807.2, serine/threonine-protein kinase PLK4 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5506045

ATGATTGACAAGAAAGCAATGAGAACAGCAGGAATGGTGAATAGAGTATGCAATGAGGTGGAAATCCATTGTCGACTAAAACATCCATCCATTTTAGAGCTCTATACTTATTTTGAGGATGACAACTATGTGTACCTTGTACTGGAGCTGGCTGAGAATGGTGAGGCAAACAGATACTTGAGAAAGCAGGGACACACCCTCAAGGAGAGTGAAGTTCGCCGCATCATGCTGCAGGTTGTCAAGGGTGTGCTCTACTTGCACTCTCATGGCATAATCCACAGGGACCTCTCCCTTGGGAACATCTTGCTCTCAAGTGACATGGACGCAAAAATTGCTGACTTTGGACTTGCTACGAGGCTGTCCCTGCCTGACGAGAAGCACTACACCATGTGTGGAACACCCAACTACATCTCCCCTGAGATAGCAACAAGGGATCCTCATGGGTTGGAATCTGATGTCTGGTCCATTGGATGTATGCTGTTTACACTACTTGTTGGAAAACCTCCATTTGATACTGAAGCCGTCAGAAGCACTCTAAACAAAGTTGTCCTGGCTGAGTATGACATCCCAAACCATGTATCCATAGAAGCAAGGGACTTGATTTCCAAGTTGCTGAAAAAGAATCCACAAGACAGACTTACCCTATCAGGGATTCTTGATCACCCATTCATCACAAACCAGACCTTGAATACCAAATACTCATCACCAACAAGACAGCATCTAAATCCACGGGCCTATGAGAATTCCTTGGACAGTGGCACGGGTACCATGGCAACCATATCCACAGGTCATGCGCCATTTCAGCAGGATAACAGACATGCTGTCAAATCCAGCTCAGCTGAAAGGACATCAGACATCTGGCCTCGTGATCCTAAACACCCCCCATCCCCTCCTGTTAGGCAAAGACCAAGCTCCTGTCCAAGCACTGAGAATGTAACCACAGGGAGCTCATCCCATGTCCGCGGGTCAGATGTGGCACAGCCAGCCCAGTATTCTGGGCTGAAGACCCGTACTTCTGACTCATGGCTGTCAGATATCCACTCGTCTAAGATCCCCAAACTACCACAGAAGCCACTAGTGGGCCTGGACAAAATGAATGGGATTCAAAGCAAATTCAAGTCATATAATGCAACCAAATACAGCAGTTATTATGGAAGCACCCTTGGGGATATTTTACACTCGGCGGGACAGCAAAACGGCACTAACACCAGCAGCAGTGGTTTCTACAGTGCAGATACCAAGTCTTACTCTGCGAACCATGGGCTTAAGACCTCCAGCACAGACCACAATAACAAGGAAAGCTGTCAAACAAGAGATAATCACATGTATGAGAAATCCATTGAGCAGCCAAGTGCTACCAAGAGTGAGCACAGCAGAGCCTATAGCAGCCAAGACAGTAGGCCACACTCACACCACAAGCGCCATGGTAGTGACAGTGTCAGTAAGGATTTTGATGCTTCACCGCAACCCAGTCAGGGAGAGAGCAGGCGTAAGCAGAATCATCGTAGTGATAGTGAAAGGCAAACCAGGCGTGCTGAAAAATCACGTTCTGGTGGAAGGGATAAATCACTGGGTGAACTGACAGAGCCACTGAATGCTGAAAGACTCAGGCCCATCCGACAGAAGACACGGAATGCAGTTGTTAGCATCACTGATGAAGCAGAAGTCTGCCTGGAATTCTTACAACAAAAAGGTGGTCAAAGCATTGTCACCGAGGTAATAAGAATTGCATCCAATGGCATGAAGGTCTCTGTGTACCAACCTAGTGAAGCAGAAAAGTTACTTGGCAGTGAGCCCCCCTTGCCACCATCTGCAGGGAATGGAAGCTACCTCTTCCCCAGCCTGCCGTCCAAGTACTGGAAGAAGTATAAGTATGCAGCAAAGTTTGTACAACTTGTGCGCAAACTTACGCCCAAGGTCACTCTTTATTCAAAGCATGCTAAATGTGTCCTCATGGAAAACTACCCACATGCAGACTTCGAAGTCTGCTTCTACAATGGGGCAAAAGTTCATCAGTCGCAGGAGTGCACCCGTGTCATTGAGCCAGGAGGTGTGTCCTATACCTTGGAATCGGTTGGAGGCATTGAAGGTGTCCCAGTGGAGATGCGTAAGCTTATCCAACATGTCAAAGCTGCTTACCAGCAATGCGTCCGGCTTGAGAGAATCATTATGCAGGAGGAAAAAGAGAGCAATGGAAATCAGTATTTCCCATTCATTGTTGGCCGCCGTCCTCCTGCATGGAAGAACTCTAGTGGAAAAAGTGAAAAGCAGGACCAACAAGGCTGCAGTAACGGTCAAAGCCAGCCTGTCCTTCCTTCATCACCAAGTATTGCAGCTCCAGCAATGACCTCCCTCTTGTCATTTGATGGCACCATTGCCAGTACAGCACAGACCACCAACCCAGCATTTCCAGGCAAATCCAGGAAAACATCTCCCTCCAAGACATCACGGCACAAGCAATCACCAGCCCAGCCTATCCCTGCTGAAGTGGCAAATGCCAAAACAGATCCTTCCCCTCACCACTATGTGGAGGGAAGCTCTCCTATACCTTCGGCACATGTCTGCAAGATGGCATTTGTGGATGGTGTGGGATGGTCCTCACAGCTGACAACTGGTGAGGTGTGGATTCAGTATACCGATGGCTCACAGATCATATTCCATGCTGCAGCAGCCGCCATCAAGTTTACAGACAGCACGGGAAATGTCACTCGGTATGAATATGCAGACAGATTGCCATCTGTTATTAAAGAGAAGCTCTCCCATTTGCCAGCTGTTATTAAAACACTAGCAACAACCTCTAAAGTATCATAA

Transcript

rna-XM_032374415.2

GCGCTCGTTCAAATCCGTTTTCATGAAACGAGAGCAAAGTAAACTTACAGAATTACTGGAAAAATTGTGATAAAAACCGTCTAAAATATGGGCGATCACCGAAAAACAATTTCATATGCTTAAACAGATGATTTATACACATACTGGAGGGTTTCTTTTGGTGTATTCGGGTTTAAAAACGTATCTGTTTTGAACTTGAAAATACTAGAAGATGACAACACAATACATGGGGGACTCGATCGAGGTGAATTTGTGTGGACTTCCAAGTCCTAGATCTTCTTGGAAAAGGGGGGTTTGCCTGCGTTTACAGGGGACGTTGTTTAGCCACAGGACAGGAAGTAGCCATCAAAATGATTGACAAGAAAGCAATGAGAACAGCAGGAATGGTGAATAGAGTATGCAATGAGGTGGAAATCCATTGTCGACTAAAACATCCATCCATTTTAGAGCTCTATACTTATTTTGAGGATGACAACTATGTGTACCTTGTACTGGAGCTGGCTGAGAATGGTGAGGCAAACAGATACTTGAGAAAGCAGGGACACACCCTCAAGGAGAGTGAAGTTCGCCGCATCATGCTGCAGGTTGTCAAGGGTGTGCTCTACTTGCACTCTCATGGCATAATCCACAGGGACCTCTCCCTTGGGAACATCTTGCTCTCAAGTGACATGGACGCAAAAATTGCTGACTTTGGACTTGCTACGAGGCTGTCCCTGCCTGACGAGAAGCACTACACCATGTGTGGAACACCCAACTACATCTCCCCTGAGATAGCAACAAGGGATCCTCATGGGTTGGAATCTGATGTCTGGTCCATTGGATGTATGCTGTTTACACTACTTGTTGGAAAACCTCCATTTGATACTGAAGCCGTCAGAAGCACTCTAAACAAAGTTGTCCTGGCTGAGTATGACATCCCAAACCATGTATCCATAGAAGCAAGGGACTTGATTTCCAAGTTGCTGAAAAAGAATCCACAAGACAGACTTACCCTATCAGGGATTCTTGATCACCCATTCATCACAAACCAGACCTTGAATACCAAATACTCATCACCAACAAGACAGCATCTAAATCCACGGGCCTATGAGAATTCCTTGGACAGTGGCACGGGTACCATGGCAACCATATCCACAGGTCATGCGCCATTTCAGCAGGATAACAGACATGCTGTCAAATCCAGCTCAGCTGAAAGGACATCAGACATCTGGCCTCGTGATCCTAAacaccccccatcccctcctgTTAGGCAAAGACCAAGCTCCTGTCCAAGCACTGAGAATGTAACCACAGGGAGCTCATCCCATGTCCGCGGGTCAGATGTGGCACAGCCAGCCCAGTATTCTGGGCTGAAGACCCGTACTTCTGACTCATGGCTGTCAGATATCCACTCGTCTAAGATCCCCAAACTACCACAGAAGCCACTAGTGGGCCTGGACAAAATGAATGGGATTCAAAGCAAATTCAAGTCATATAATGCAACCAAATACAGCAGTTATTATGGAAGCACCCTTGGGGATATTTTACACTCGGCGGGACAGCAAAACGGCACTAACACCAGCAGCAGTGGTTTCTACAGTGCAGATACCAAGTCTTACTCTGCGAACCATGGGCTTAAGACCTCCAGCACAGACCACAATAACAAGGAAAGCTGTCAAACAAGAGATAATCACATGTATGAGAAATCCATTGAGCAGCCAAGTGCTACCAAGAGTGAGCACAGCAGAGCCTATAGCAGCCAAGACAGTAGGCCACACTCACACCACAAGCGCCATGGTAGTGACAGTGTCAGTAAGGATTTTGATGCTTCACCGCAACCCAGTCAGGGAGAGAGCAGGCGTAAGCAGAATCATCGTAGTGATAGTGAAAGGCAAACCAGGCGTGCTGAAAAATCACGTTCTGGTGGAAGGGATAAATCACTGGGTGAACTGACAGAGCCACTGAATGCTGAAAGACTCAGGCCCATCCGACAGAAGACACGGAATGCAGTTGTTAGCATCACTGATGAAGCAGAAGTCTGCCTGGAATTCTTACAACAAAAAGGTGGTCAAAGCATTGTCACCGAGGTAATAAGAATTGCATCCAATGGCATGAAGGTCTCTGTGTACCAACCTAGTGAAGCAGAAAAGTTACTTGGCAGTGAGCCCCCCTTGCCACCATCTGCAGGGAATGGAAGCTACCTCTTCCCCAGCCTGCCGTCCAAGTACTGGAAGAAGTATAAGTATGCAGCAAAGTTTGTACAACTTGTGCGCAAACTTACGCCCAAGGTCACTCTTTATTCAAAGCATGCTAAATGTGTCCTCATGGAAAACTACCCACATGCAGACTTCGAAGTCTGCTTCTACAATGGGGCAAAAGTTCATCAGTCGCAGGAGTGCACCCGTGTCATTGAGCCAGGAGGTGTGTCCTATACCTTGGAATCGGTTGGAGGCATTGAAGGTGTCCCAGTGGAGATGCGTAAGCTTATCCAACATGTCAAAGCTGCTTACCAGCAATGCGTCCGGCTTGAGAGAATCATTATGCAGGAGGAAAAAGAGAGCAATGGAAATCAGTATTTCCCATTCATTGTTGGCCGCCGTCCTCCTGCATGGAAGAACTCTAGTGGAAAAAGTGAAAAGCAGGACCAACAAGGCTGCAGTAACGGTCAAAGCCAGCCTGTCCTTCCTTCATCACCAAGTATTGCAGCTCCAGCAATGACCTCCCTCTTGTCATTTGATGGCACCATTGCCAGTACAGCACAGACCACCAACCCAGCATTTCCAGGCAAATCCAGGAAAACATCTCCCTCCAAGACATCACGGCACAAGCAATCACCAGCCCAGCCTATCCCTGCTGAAGTGGCAAATGCCAAAACAGATCCTTCCCCTCACCACTATGTGGAGGGAAGCTCTCCTATACCTTCGGCACATGTCTGCAAGATGGCatttgtggatggtgtgggaTGGTCCTCACAGCTGACAACTGGTGAGGTGTGGATTCAGTATACCGATGGCTCACAGATCATATTCCATGCTGCAGCAGCCGCCATCAAGTTTACAGACAGCACGGGAAATGTCACTCGGTATGAATATGCAGACAGATTGCCATCTGTTATTAAAGAGAAGCTCTCCCATTTGCCAGCTGTTATTaaaacactagcaacaacctctAAAGTATCATAAAACATATACAAACCTATAGCACAATATATATCATTTTTAGACTCTTCACAAATCAAATATTCAGTATAATCACAAATTTTCATCTTAATCTCCAATGGCTTTTTTGTACATTTTAATTATCTAGATTTCTGCCTTTGTAAACTCCAGTCTAAAATTGTTTACGACCACTGAAACAATATTGCAGTGTTACACCACAAACCATGTTATGGGTAAGACCTCTGGAATGAAGCTTCTAACACGCTCCTAATAAGCTCCATTGTTGGGCATTGTCATGATTTATAGTGCATGACAAATTCTTGTGTATACTGGTGGTTtgtaaataacaataattgaaACTCTGTAAAGTGTTAGGCagtattttattctttatttttatctttgtaAATCCTTTTTCCAGCATATCCAACCCTCTTTGTAATAAAACCTGCATATCACATACCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SNN5	Serine/threonine-protein kinase PLK4 OS=Nematostella vectensis OX=45351 GN=v1g246408 PE=3 SV=1
Q6PAD2	Serine/threonine-protein kinase PLK4 OS=Xenopus laevis OX=8355 GN=plk4 PE=2 SV=1
B3DL84	Serine/threonine-protein kinase PLK4 OS=Xenopus tropicalis OX=8364 GN=plk4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005533 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18409 all species →	Plk4_PB2	Polo-like Kinase 4 Polo Box 2	Domain	Interproscan
PF18190 all species →	Plk4_PB1	Polo-like Kinase 4 Polo Box 1	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046437 all species →	Homologous_superfamily	Serine/threonine-protein kinase, first cryptic polo-box domain superfamily	Interproscan
IPR033699 all species →	Domain	Plk4, first cryptic polo-box domain	Interproscan
IPR033698 all species →	Domain	Plk4, second cryptic polo-box domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000959 all species →	Domain	POLO box domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR047108 all species →	Homologous_superfamily	Plk4-like, second cryptic polo-box domain superfamily	Interproscan
IPR033696 all species →	Domain	Plk4, C-terminal polo-box domain	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24345 all species →	SERINE/THREONINE-PROTEIN KINASE PLK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08863	PLK4; polo-like kinase 4	EC:2.7.11.21	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032230306.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

35TPM > 0

16Conditions

6.0Max TPM

1.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	2	2.84	6.01
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	2.13	2.97
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	1.10	1.52
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	1.20	1.41
whole 6 week old aboral regenerate · regenerate uncut	3	3	1.05	1.26
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	0.40	1.19
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	2.04	3.19
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	2.47	2.85
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	0.63	1.18
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	0.57	0.89
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	0.85	1.13
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	2.12	3.35
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	2.36	4.03
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	0.85	2.55
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	0.59	0.96
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	0.30	0.89

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	6.01
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	2.52
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	0.00
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.97
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.78
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.63
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.52
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.12
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.66
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	1.41
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	1.32
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.89
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.26
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.20
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.68
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	1.19
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	3.19
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	2.91
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.85
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.47
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.08
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	1.18
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.70
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.89
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.83
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	1.13
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.78
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.65
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.35
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.01
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	4.03
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.04
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	2.55
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.96
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.81
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.89
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.