Genomic Location: NC_064042.1:14035256...14061674
NR annotation: XP_032230959.2, roundabout homolog 1 isoform X1 [Nematostella vectensis]
| CDS | |||||
| LOC5506652 | |||||
| Transcript |
| rna-XM_032375068.2 |
| Protein |
| XP_032230959.2 |
| Uniprot term | Description |
|---|---|
| Q7TPD3 | Roundabout homolog 2 OS=Mus musculus OX=10090 GN=Robo2 PE=1 SV=2 |
| Q9HCK4 | Roundabout homolog 2 OS=Homo sapiens OX=9606 GN=ROBO2 PE=1 SV=2 |
| Q96MS0 | Roundabout homolog 3 OS=Homo sapiens OX=9606 GN=ROBO3 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR013106 | Domain | Immunoglobulin V-set domain | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR050958 | Family | Cell Adhesion and Cytoskeletal Organization | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45080 | CONTACTIN 5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0008046 | Molecular Function | axon guidance receptor activity | Interproscan |
| GO:0030424 | Cellular Component | axon | Interproscan |
| GO:0043025 | Cellular Component | neuronal cell body | Interproscan |
| GO:0050808 | Biological Process | synapse organization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06753 | ROBO1; roundabout, axon guidance receptor 1 | - | Cell adhesion molecules | ko04515 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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