Gene detail

Detailed information of XP_032231357.2 in Nematostella vectensis

Genomic Location: NC_064040.1:5662682...5666909
NR annotation: XP_032231357.2, ribosomal RNA processing protein 36 homolog isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SL20	Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 GN=v1g245966 PE=3 SV=1
A6QNR1	Ribosomal RNA processing protein 36 homolog OS=Bos taurus OX=9913 GN=RRP36 PE=2 SV=1
Q96EU6	Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008071 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06102 all species →	RRP36	rRNA biogenesis protein RRP36	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009292 all species →	Family	rRNA biogenesis protein RRP36	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21738 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000462 all species →	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0030686 all species →	Cellular Component	90S preribosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14795	RRP36; ribosomal RNA-processing protein 36	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.