Gene detail

Detailed information of XP_032232152.2 in Nematostella vectensis

Genomic Location: NC_064034.1:17300400...17315423
NR annotation: XP_032232152.2, dihydropyrimidine dehydrogenase [NADP(+)] [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5507598

ATGGCTTTGTCTACTCATTCACCGGAAATAGAGAATTTGCTCTCACTAAATCCAAGCATTCCTAAAAAGGCAAACATCGTTCCTACTGCAGTAACCAAGAAAAACAAGAAGCACTGGAAGCGCAATGCTGATAAATCATGTGGATCATGCAGTGAAGCATTCATCAAAAACTTTGATGACATCAAGCACACTACGCTGAGTGAGAGGGGAGCCTTGAAGGAAGCTGGACGGTGCCTCAAGTGTGTCGACGCCCCCTGTCAGAAGAGCTGTCCCACCCAATTAGACATCAAGTACTTTATTTCTTGCATTGCGAACAAGAACTTCTATGGAGCAGCCAAAGCCATTTTCAGTGACAACCCACTAGGCTTGACATGTGGCATGGTTTGCCCTACTAGCGACCTGTGTGTTGGAGGATGTAACTTGTATGCCTCAGAGGAGGGTCCTATTAACATCGGAGGACTACAACAGTTTGCTACTGAGATTTTTAAGAACATGAAGCTGCCCCAGATACGGGATCCGGATCTCACTCCTGTTGACCAACTTCCAGAGAGCTACAAGTCGAAGATTGCCCTTATTGGTTGCGGTCCAGCCTCCATCAGCTGTGCGACTTTTCTCGGCCGTCTTGGCTACACCAATCTCACAATCTTCGAAAAAGAGAAATTCATTGGTGGCTTAAGCTCTGCTGAAATCCCTCAGTTCCGGTTGCCATACAGTGTGGTTGATTTTGAAGTGAAACTCATGATGGATCTTGGAGTCAAGGTTGAAACAGGGAGAGGTCTTGGTGTATCCTCAGGGTTGACGATTCAGTCTCTTAAAAATGATGGCTACAAGGGAATCTTTCTAGGAATGGGTCTTCCCCAGCCAAAGAAGTTCCATGTGTTTGAAGGTCTTTCTGAGCAGAATGGCTTCTACACATCAAAGAGTTTTTTGCCTGTTGTATCCAGTGGCAGCAAACCAGGAATGTGTGCTTGCAAGTCCAGCCTACCACAGCTCAGTGGTTACGTGATTGTGTTAGGTGCCGGTGATACTGCATTTGACTGTTGCACCTCAGCACTGCGCTGCGGGGCCAGAAGAGTGTTTGTTGTTTTCAGAAAAGGATTCACAAATATCCGAGCTGTGCCAGAGGAGATGCAACTAGCTGTTGATGAGAAGTGTGAGTTTTTGCCTTTCATGTCACCGAAGCAGGTGCATGTAAAAGATGGCAAGATTGTTGCAATGGAATTCTTCCGAACAGAACAGCTGGATGATGGAACATGGACTGAAGATGCAGAACAGACATTGAAGATAAAAGCTACCTTTGTTATCTCCGCCTTTGGCTCCACCCTTAGCAATGAAGATGTCAAACAAGCTTTGGCGCCAATCAAATTCAATAAGTGGGGTCTACCTGAAGTTAGCGCCGAAACCATGGCAACAAGTGCTGAAGGCGTGTTCTGTGGGGGTGACCTGGCTGGCATCGCAAACACCACAGTGGAGTCAGTGAATGATGGAAAGCAGGCTGCATGGTTTATGCATCAACATCTTCAGTCCCTCCATGGCCTCACCATACCATCAGAGCCCGCTCTGCCACGCTTCTTCACCCCCGTTGACCAAGTAGATCTGAGTGTAGAGATCTGTGGTATCAAGTTCCCTAACCCCTTTGGCTTGGCAAGTGCCCCTCCTACTACTACCTCTGCCATGATCAGGCGGGGATTTGAGGCCGGCTGGGGCTTTGCGCTCACCAAGACATTCAGCTTGGATAAGGATATTGTCACCAATGTATCTCCTCGTATCGTCCGAGGGACAACTTCCGGACACTTATACGGCCCCGGACAAGGCTCGTTCCTCAACATCGAGTTGATCAGTGAGAAGACCTCTGCGTACTGGTGCCGATCCATCACAGAACTCAAGAAAGACTACCCTGACAAGATCCTCATCGCCAGTATTATGTGTGGATATTCCAAAGAGGACTGGACCACACTTGCCAAGATGGCAGAGGCTGCCGGAGCAGACGCGTTGGAGCTGAATCTCTCTTGTCCTCACGGTATGGGAGAGAGAGGCATGGGACTAGCCTGTGGACAGGACGCAGAACTGGTGCGTAATATTTGCCGCTGGGTTCGTGCCGCCATCACGATTCCATTCTTCGCCAAGCTTACACCAAATGTGACGGACATCGTGGTCATTGCGCGAGCAGCCAAGGAAGGTAACGCAGATGGCGTGACCGCCACTAACACAGTATCGGGTCTGATGGGCCTGAAGGGTACCAGTGAAGCCTGGCCCGCTATCGGACGTGAAAAGCGGACAACGTACGGCGGGATGTCCGGTAATGCCATCCGCCCCATTGCCCTCCGTGCTGTGTCGGCTATCGGACGGGCTCTACCTGGATTTCCCATCCTGGCCACTGGTGGTATTGACAGCGCTGATGCTGCACTTCAATTCCTGCACTGTGGAGCCAGCGCACTCCAGGTTTGTAGCGCAGTCCAGAACCAGGACTTCACCGTTGTGGATGACTACATCAACGGCCTGAAGTGCCTGATGTACATGAAGTCTGTGGATGAGTACGCCGACTGGGACGGGCAGTCACCCCCCACCCCTCGCCACCAGCAGGGCAAGCCTGTGCCCAAGATAGCTGATCTCGTGGGAAAGGGCCTTCCAAGTTTCGGCCCCTACTTGGTCAAGCGTAATGAAATCATCGCCGCTCACAAGAGCTCTTCAGACATCCTGAGCAAGGAGTATGAACCAGAGCCCGTCCGTCCCGCAGTGAAGCAGTCGAAACCCACTCCCTCGGTCAAGGACGTAGTTGGTCTTGCCCTTGACCGTATAGGTACATACGGGGATCTTGACAACAGACAGCAAGTCGTTGCCCTGATTGACGAGGAAATGTGCATCAACTGCGGCAAGTGCTACATGACGTGCAACGACTCTGGTTACCAGGCCATCAAGTTCGACCCCGAGACCCACCTGCCAACCGTCACAGATGATTGCACCGGATGTACCCTCTGCTTGAGCGTCTGTCCAATCATCGATTGCATCAAGATGGTCCAAAGGCCGACCCCGTATGTCCCCAATCGCGGGGTGCCTTTGGCAGTAACGGCCGAATCGTGA

Transcript

rna-XM_032376261.2

GGCAGTCACGTGGCTTTGTACTCGAAAAGCTAGAATAACACGAGTTTGCGTAACCGAGTAGATTACTCCTGGGAAAAATCCACCTAAACTAGCCTCAAACGTTCTACAACTTGGGCACAAGTCTAGTATGGCTTTGTCTACTCATTCACCGGAAATAGAGAATTTGCTCTCACTAAATCCAAGCATTCCTAAAAAGGCAAACATCGTTCCTACTGCAGTAAccaagaaaaacaagaagCACTGGAAGCGCAATGCTGATAAATCATGTGGAtcatGCAGTGAAGCATTCATCAAAAACTTTGATGACATCAAGCACACTACGCTGAGTGAGAGGGGAGCCTTGAAGGAAGCTGGACGGTGCCTCAAGTGTGTCGACGCCCCCTGTCAGAAGAGCTGTCCCACCCAATTAGACATCAAGTACTTTATTTCTTGCATTGCGAACAAGAACTTCTATGGAGCAGCCAAAGCCATTTTCAGTGACAACCCACTAGGCTTGACATGTGGCATGGTTTGCCCTACTAGCGACCTGTGTGTTGGAGGATGTAACTTGTATGCCTCAGAGGAGGGTCCTATTAACATCGGAGGACTACAACAGTTTGCTACTGAGATTTTTAAGAACATGAAGCTGCCCCAGATACGGGATCCGGATCTCACTCCTGTTGACCAACTTCCAGAGAGCTACAAGTCGAAGATTGCCCTTATTGGTTGCGGTCCAGCCTCCATCAGCTGTGCGACTTTTCTCGGCCGTCTTGGCTACACCAATCTCACAATCTTCGAAAAAGAGAAATTCATTGGTGGCTTAAGCTCTGCTGAAATCCCTCAGTTCCGGTTGCCATACAGTGTGGTTGATTTTGAAGTGAAACTCATGATGGATCTTGGAGTCAAGGTTGAAACAGGGAGAGGTCTTGGTGTATCCTCAGGGTTGACGATTCAGTCTCTTAAAAATGATGGCTACAAGGGAATCTTTCTAGGAATGGGTCTTCCCCAGCCAAAGAAGTTCCATGTGTTTGAAGGTCTTTCTGAGCAGAATGGCTTCTACACATCAAAGAGTTTTTTGCCTGTTGTATCCAGTGGCAGCAAACCAGGAATGTGTGCTTGCAAGTCCAGCCTACCACAGCTCAGTGGTTACGTGATTGTGTTAGGTGCCGGTGATACTGCATTTGACTGTTGCACCTCAGCACTGCGCTGCGGGGCCAGAAGagtgtttgttgttttcagAAAAGGATTCACAAATATCCGAGCTGTGCCAGAGGAGATGCAACTAGCTGTTGATGAGAAGTGTGAGTTTTTGCCTTTCATGTCACCGAAGCAGGTGCATGTAAAAGATGGCAAGATTGTTGCAATGGAATTCTTCCGAACAGAACAGCTGGATGATGGAACATGGACTGAAGATGCAGAACAGACATTGAAGATAAAAGCTACCTTTGTTATCTCCGCCTTTGGCTCCACCCTTAGCAATGAAGATGTCAAACAAGCTTTGGCGCCAATCAAATTCAATAAGTGGGGTCTACCTGAAGTTAGCGCCGAAACCATGGCAACAAGTGCTGAAGGCGTGTTCTGTGGGGGTGACCTGGCTGGCATCGCAAACACCACAGTGGAGTCAGTGAATGATGGAAAGCAGGCTGCATGGTTTATGCATCAACATCTTCAGTCCCTCCATGGCCTCACCATACCATCAGAGCCCGCTCTGCCACGCTTCTTCACCCCCGTTGACCAAGTAGATCTGAGTGTAGAGATCTGTGGTATCAAGTTCCCTAACCCCTTTGGCTTGGCAAGTGCCCCTCCTACTACTACCTCTGCCATGATCAGGCGGGGATTTGAGGCCGGCTGGGGCTTTGCGCTCACCAAGACATTCAGCTTGGATAAGGATATTGTCACCAATGTATCTCCTCGTATCGTCCGAGGGACAACTTCCGGACACTTATACGGCCCCGGACAAGGCTCGTTCCTCAACATCGAGTTGATCAGTGAGAAGACCTCTGCGTACTGGTGCCGATCCATCACAGAACTCAAGAAAGACTACCCTGACAAGATCCTCATCGCCAGTATTATGTGTGGATATTCCAAAGAGGACTGGACCACACTTGCCAAGATGGCAGAGGCTGCCGGAGCAGACGCGTTGGAGCTGAATCTCTCTTGTCCTCACGGTATGGGAGAGAGAGGCATGGGACTAGCCTGTGGACAGGACGCAGAACTGGTGCGTAATATTTGCCGCTGGGTTCGTGCCGCCATCACGATTCCATTCTTCGCCAAGCTTACACCAAATGTGACGGACATCGTGGTCATTGCGCGAGCAGCCAAGGAAGGTAACGCAGATGGCGTGACCGCCACTAACACAGTATCGGGTCTGATGGGCCTGAAGGGTACCAGTGAAGCCTGGCCCGCTATCGGACGTGAAAAGCGGACAACGTACGGCGGGATGTCCGGTAATGCCATCCGCCCCATTGCCCTCCGTGCTGTGTCGGCTATCGGACGGGCTCTACCTGGATTTCCCATCCTGGCCACTGGTGGTATTGACAGCGCTGATGCTGCACTTCAATTCCTGCACTGTGGAGCCAGCGCACTCCAGGTTTGTAGCGCAGTCCAGAACCAGGACTTCACCGTTGTGGATGACTACATCAACGGCCTGAAGTGCCTGATGTACATGAAGTCTGTGGATGAGTACGCCGACTGGGACGGGCAgtcaccccccacccctcgcCACCAGCAGGGCAAGCCTGTGCCCAAGATAGCTGATCTCGTGGGAAAGGGCCTTCCAAGTTTCGGCCCCTACTTGGTCAAGCGTAATGAAATCATCGCCGCTCACAAGAGCTCTTCAGACATCCTGAGCAAGGAGTATGAACCAGAGCCCGTCCGTCCCGCAGTGAAGCAGTCGAAACCCACTCCCTCGGTCAAGGACGTAGTTGGTCTTGCCCTTGACCGTATAGGTACATACGGGGATCTTGACAACAGACAGCAAGTCGTTGCCCTGATTGACGAGGAAATGTGCATCAACTGCGGCAAGTGCTACATGACGTGCAACGACTCTGGTTACCAGGCCATCAAGTTCGACCCCGAGACCCACCTGCCAACCGTCACAGATGATTGCACCGGATGTACCCTCTGCTTGAGCGTCTGTCCAATCATCGATTGCATCAAGATGGTCCAAAGGCCGACCCCGTATGTCCCCAATCGCGGGGTGCCTTTGGCAGTAACGGCCGAATCGTGACAACGCGTAGTAGAGAATCATCGAAATCGCCAACAATTCTCTTAACCTATCTCTCAATTATGTATCTCGTGGTGTTTATTaggatatatatttatatatatcgACTTTATATGGTATGTTCTGTACTGCGTTTTAGGGAACTATTTTTCATGGATGAATATGCAACTCAATTTATTTTAAACTAGATCGGTGTGCACATTAATCACTCTAATAAATAACTTGTGAATTATCAAATAAAGTGAATCAGTGCTTGTAGACCACTGATGATTCTGTGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CHR6	Dihydropyrimidine dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Dpyd PE=1 SV=1
O89000	Dihydropyrimidine dehydrogenase [NADP(+)] OS=Rattus norvegicus OX=10116 GN=Dpyd PE=2 SV=1
Q12882	Dihydropyrimidine dehydrogenase [NADP(+)] OS=Homo sapiens OX=9606 GN=DPYD PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003103 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF01180 all species →	DHO_dh	Dihydroorotate dehydrogenase	Domain	Interproscan
PF14691 all species →	Fer4_20	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster	Domain	Interproscan
PF14697 all species →	Fer4_21	4Fe-4S dicluster domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017896 all species →	Domain	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Interproscan
IPR017900 all species →	Conserved_site	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR009051 all species →	Homologous_superfamily	Alpha-helical ferredoxin	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR005720 all species →	Domain	Dihydroorotate dehydrogenase, catalytic	Interproscan
IPR001295 all species →	Conserved_site	Dihydroorotate dehydrogenase, conserved site	Interproscan
IPR028261 all species →	Domain	Dihydroprymidine dehydrogenase domain II	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43073 all species →	DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0002058 all species →	Molecular Function	uracil binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006210 all species →	Biological Process	thymine catabolic process	Interproscan
GO:0006212 all species →	Biological Process	uracil catabolic process	Interproscan
GO:0017113 all species →	Molecular Function	dihydropyrimidine dehydrogenase (NADP+) activity	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00207	DPYD; dihydropyrimidine dehydrogenase (NADP+)	EC:1.3.1.2	Drug metabolism - other enzymes	ko00983	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032232152.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

16Conditions

164.8Max TPM

119.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	142.11	160.77
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	111.50	142.16
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	132.05	135.17
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	133.25	137.56
whole 6 week old aboral regenerate · regenerate uncut	3	3	112.38	114.85
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	122.48	133.00
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	146.63	161.48
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	108.05	116.90
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	89.52	98.05
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	87.46	89.61
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	93.54	102.95
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	145.05	164.79
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	129.10	140.00
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	122.49	133.83
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	122.15	133.72
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	116.50	148.32

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	160.77
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	146.52
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	119.04
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	142.16
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	99.24
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	93.10
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	135.17
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	133.10
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	127.88
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	137.56
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	133.85
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	128.33
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	114.85
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	111.52
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	110.76
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	133.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	125.16
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	109.27
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	161.48
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	155.14
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	123.27
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	116.90
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	109.18
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	98.07
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	98.05
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	95.37
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	75.14
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	89.61
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	88.38
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	84.38
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	102.95
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	95.30
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	82.35
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	164.79
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	150.67
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	119.68
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	140.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	129.84
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	117.45
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	133.83
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	122.67
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	110.97
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	133.72
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	116.56
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	116.18
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	148.32
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	101.67
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	99.52

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.