Gene detail

Detailed information of XP_032232624.2 in Nematostella vectensis

Genomic Location: NC_064040.1:2884109...2896661
NR annotation: XP_032232624.2, endoribonuclease Dicer [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5507996

ATGGTGAACATGTCATTTCGGTGCCCAAGTTTCGGTGTCGGTCTTGTTGATAGATCTCTGCAGAGAGATGTGAGTGTGGTTTGTACAGCAGAGCAAACCAGCAAAGTATTCGTGGCTTTTAAAGTTATCGAAGAAAGGCTTCATGGAGACAGTGGCTACAAGGTTTTCGTCACTTCTAACGATACTCAAGGTATCTTTATAACAGGGTTGACTCAAGCACTACAGTCATTGACCCCCTATACTCTCCAATTTTGCAATAACACGCAACAATGGATATCTCCAAGAACTTTTGATGTTGACATTTTCATTGGATCCCACTTGGATATCCTCAAAATATTGAGCCATCGACAGCCCTCCCCATTACTTCTTGTGATGGATAATTGTCATGCGGTGTCAGAAGGAGGTTCAGTTATGAAGGACCTAGTAAACATTGCCAGACAACAGCCAAAGTGCATTATCATGGGTTTAACATCAGGTATTGTGGGTAGGAGGAGAACATGCATTTCAGATGTATATCAACTTTTAACTACAATGGAGGTAACATTTGGTGTCCAAGCTATTGTTTCTAGTGATTTACTTGCTGTAAACAAGTATGGAGAAAGACCTGAAGAGACATTGGTTGTAGCCTCGTCAATGACAAATGACATAATTAACAAGAACGTGTTAGAGTGTTTGCACGAGGCAAGGGATACACTGTCCTTTGCTAACAATGGTGAAAGTGTAGATGTTTTTAATCGCCTGTCATCCATGTTAGCGGAATGTGAAGATATATTAATAGATCTTGGTACCTTTAGTTCACTCAAGGCTTTGTCATTCACTAGTAGAGAATTTAACAAAGAAGGGAAGAAAGCAATAAAGGCCAAACAAGAAGACTTAGCAACCACCCTACAAATATGTGCAGCTAAACTAGACGAAGTGGTTAATACTGTGAAGAAAGAGTTTGATGGTTCTGCAGATATTCTATTGACAGATGTGACAAGAAGAATTTTTCAATTTTTAACTTTGTTGGATAAAGAGAATTCTACATCCCCTACAGAACAAGTTGAATTAAGAAATAAAAATTTTGAAAGAGTTCATTTTAAATGTCAAAATGATGACATTAGTAAAATTGAAATTGCCAATCACACAACAAGGCCAATGCAAAGACCTGTTGCTGTGATTCTTGCAAAGTCTGAACTGCAAGCTCATGCCATAAACAGCCTTATCAGTTACATCTCTGATTTTACTCATCCATACCTCAAAACCAGAATTTTGTCAAATGACAAGATCAATCAGATGATTAACACTCACATGTCTTTAGATGACAAGGAGCCAGACCCCCTAGTAGGTGACATGACCATGCAGGGCATCTTGAATGGGTCCATTAATGTCCTTATTGTATGCCGTGAGGTAGAGCATCTACTGCGCCTATCTCAGTGCCGGCTGGTTGTCAGGTTCGGTGTCCCTAATGATTATATATCATATGTTGTTGTCAAGAACATTGCCAGAGAGCAAAATGCACATGTGATGTTTATAAAAACCAAGAGCGTGCAATGTCACGAGGAAAATACCTTTGTGGAATTTCAGACATTGGAAGAAATATTCTATGTCAGAAGCTCACCACAGCCGGTGCATCATTGCACATCTGATCTGAAAGAGGACTCAGTATATACACCATTTGGCCCAGATGGGCCCTGTGTAACGGCAGATACATCCATCAGTCTCATCAATAGTTTTTGTAGTCAGTTCCACACTGATGGGTTGAGTAAAGCTATCCCACATTGCTGCAGCAGTGTGTTTGAGCAGGGAGAGCAGATCAAAGTGACTTCTACATTGTTTTTGCCAAGAAATTCTCCACTTAGCCAGCCATTCAAGGCCCACCTAACAGTTTCCAAACACAATCCTAAACATGAACCAGCAGTAGCTAAGCTGAGATGTGAGCAATTGGCAGCCCTAGAGGCGGTCAAAGCGCTTCATACTGCAGGGGAGCTAGACTCCAGTTTACAGCCATGCGCAAGGCGGCGAGAGCATGTGTTCAAGAGAAAAGACGAGACATGTCCTGACGAGATCGCGGATGGGAGTATAGGCCGGGCGGGATCGCTCAGGCGAAGACGTGCTTACAAGTGTAAGATTCCCTGTGTCTTCACCAACAGCCTTCCTGATCCTGGCCAATCATGCTATGTGTATGCGGTCCACCTTGTACTAACTAAGCCAGACTCGCATGAGAGGGCTGTTCGCTCACAAGGAACACGTTTAAAGGACCCTGAGAAGCGGCCTTTATCTTTAGGGATTATTCTCAACAAATCATTGCCAAAGCTCCCCGCATTTATTATCTACGACAGAGCAGGTGAGATGACTGTCTCTCTCAAGCATTGCTACAATACCATGCTCACTTCCCAACAACTCGCACTAATACAGCGCTTCCACCGATACGTGTTCACTGACGTCCTGAACCTCGAGAAAGGCGAGTCCTCGCTGAACTTCGAACCAAAAGAGAACAAGAATGGATGCTTCCTTGTACTACTCAGGAACACTGATCAGACTACGAACCCCGATAGGGAAGGTCAGACAAAGAACCCCTATGAAGAAGGCCAGACAACGAATCCCGATAGGGGAGGTCAAACAACGAATCCCGATGAGGCACAGGAAAATATCCGTAAAGGATTTGACGGCTTTCCAAAACTGAGTCAAGACGTTCATGCTTCAGGAGTTGAGAGGTGCGACAAAATCCCTTTAGACGGGGCGAATGGTAGCGCAACGGTCACAAGCAATGAGCTTCGTAGAACGCCGTGTAATGCAAATGGTAATAAGTATGATATTCGGCCTGAGATGGTTAACGAAGAAAATGTTCCAATCTTGGCCAAGCAAAATACCCACAATACTAATCCATCTTGGAAAATCGCATTCGGTTTCCTTTACTCTCTAGAAGATTCCGTGACCAGTTTTGATGACCCATGTGATCCTCCTCCTCCAATTACAAGCGACTTTGAAGTGTTTCGTGACAGTGTCGTCACGACAGCATACGCTCCTTCGAGATTGCGTTACTACGTGGCTGATATCCGCTATGATGAGAGTCCAACCTCACCGTTCCCCTCTCCGTCCGTCGCACCAACGTTCGGAGACTACTACAAGGATCGCTATGGCGTGGATCTGTCACGTGATCAGCCTCTATTGGATGTGGATCACGTGTCCTCGCGCCTGAACTTCCTTCGGCCTCGTTATAAAACAAGCAAGGGCAAAGATCTGGCTCTACCGGATGAGAAATCCAAAAGGTCGCAGAGGTCACGTGTGTCCTTGGTCCCAGAGATGTGTTCTATCCACCCTATACCGGGCTCACTGTGGCGTGACATCACTAACATGCCGTCTATTCTTTATCGTGTCGATGCTTTGCTTATAGCCGAGGAGCTACGCCAGAAATTAGCCGTCGAGGCGGGGATAGGTATGCCCGTCTGGCCTGAAGGACATGATCTACCTCAACTGTCCATCGAAGAGATGGTAGCAGGGCCAATTCACCCAGCTGCTGCCTCTAGCGACGTCACTGTACAGTGTTCCTCTTTCAGTGATCCAAATACTGCCGCTAAAACTTGCTCAGTAGTCAACACAAGTGTGCCTCTGGAGACTCGCTTGGGCAGCATGATCCTTAGCGATTCTACTGATGCGTGCACATGGGAGACCCGGAGAAGTCACTCGAATAAAGGGAGTGAAACTCCAGAAGTTGGCTTAAATGGCAAGAGAGTAAACAGCGCAGGAACCTGTTTAACAGGGGATGTAGACGCGAATGTATCTAAGGATCGTGAAACGCAGTTCGACCCTGGACCATCATCCACTCTTATCCTTCGAGCCCTGACCACAACAAGCGCCAACGATATCATAGATCACGAGCGCCTGGAGATCTACGGTGATGCTTTCATCAAGTACGCAATTTCCGAACTACTTTACAGCGATTTCCCCAATGTTAATGAAGGGAGGCTGTCTTTCTTACGCGGCCTACGCGTTAGCAATCAGCAGCTGTTCTATCTAGGTCGCAGCCGTGGCTTAGCGCCTTTGATACTTACTAAGCCGTTTGAGCCCGTTGGTAGCTGGGTGCCTCCAGGGTTCTCTTCTTCTTCCATGCGTAACGTCCACGAGACCCTGGACGTGAGTCCTCAACATGGAGTTAATGACGTTCTGAACATCGACGATGAAGACAGTTTAGATCATTCCGAGATCCAAGACATCAGCGGCAATGAATGCCGGGGAAACGTCGAACCAATGTTACTCCCACCGCACACGTTTACTGTTATATCCGATAAAACTGTTGCTGATACAATCGAGGCGTTGATAGGCGCTTGTTTGATGTCGAGTGGGACGAATGCGGCGCTTAGGCTGATGAGATGGCTTGACATGGATGTCTCGTCTTGCCCTGATAGTAAACTCTCCAACCCTTCCACTGAGAGCTCGTCTGAAGACAAAGCACGAAGCATCTATCAGGAACCATGTATTACCAATCATATACCCTCGGCTACAGAGCTATCTGTTACAGATATCAAGCCTCCTCTAACCCCTTCCTTTTCAGGGAAGATGGATGTCCAGCTTTTCAAGCGAGCCGTACAAGAGCCACTCTCTACTCCTTTCATCTCAAAGCAGACGGATGATCTCCTTCGCGTACGTACTGCAAATGATCAACCCCCAGCCACTGTATGTTCGACTGCAGGGCAAGGGCTGTTTGAAAACGTTGAGCCATCCTCGACCTCAACAGTCTCCAAGCAGATGAAAGAACAACTTTCCGTGCATGCAGTGGACGAAAAACTTTTTGACAATGCATACTCGACCTCAGAGCATGACCTTTCTATCAACAAGCAACATCAAACTACTGCAGTCTTATCGGAACACCAACTTGGCGAACTTGCCCTCGTCGAGGCTTCATTGGGTTATACTTTCCGAGACAGGGATATTCTGCTTCAGGCGCTAACTCATACGTCTTACCCACGAGCCTACAGCTCCGTCAACAGCAGCTACGAACAGTTGGAGTTCCTGGGGGACGCCCTTCTCGATTACCTCGTCACACGACACGTGCTACAGAGGTTCCCACGTCTCTCTCCCGGTGCAATAACTGACTTGCGTTCTGCTGTGGTCAACAACTACAGCTTGGCGTGTCTGACCATCCAGCGCGACTTTCACAAGCACATGCGATCCATGTCGATGGCACTGTTCAAGGTCGTGAGGAGGTTTGTGCGAAGGCTGAGCGAGATAGAGGAAAAAGAGACGAGACCAGATCAGGTTTATTCCAAGCTTCTGCTCACCACAGTGGAGGATGGGAGAGGCGGCGAGGCCATAGAGGTCCCCAAGGTGCTCGGGGACTTGTTCGAGGCGCTCCTGGGTGCGCTATACGTGGATTGTGGAAGGGATGAGGAACTAGCATGGTCAGTTATCTACCCTCTCCTGACACCAATCATCGAGCACTACTCGGTCCATCTGCCTATCTCACCCACTCGGCAGCTCGTGGAAATGATGCCAGGCGCCGCCACATTCACCTGTCTGAGTCAAAACGTCATCGGCCATCACGCCTGTGAATTGGTTGTCAAGGGTTACGGGCGGTTCATGGGCACGGGCAGGAACGCCCAGATCGCGCGATCCACCGCTGCCCAGCACGCGCTGGCGCGCATAAAGAGCAAACAAAAGAAATAA

Transcript

rna-XM_032376733.2

GACGGCAGAGACTTGGTCCagatattcaaaatggcggcttgcTTGAAAACAACCGGCAAATTTTGGATTTTATCGCTCTAAAAACAGCTCTTACAGCGCCATCGACATACTATAAACGTGGTGAATACTTTAAGGGAAAGTAGATCCCGCTTTTTATTAATTTCGTGCATGAATTCTAGCTGAGATAGTAGCAAATGGTGAACATGTCATTTCGGTGCCCAAGTTTCGGTGTCGGTCTTGTTGATAGATCTCTGCAGAGAGATGTGAGTGTGGTTTGTACAGCAGAGCAAACCAGCAAAGTATTCGTGGCTTTTAAAGTTATCGAAGAAAGGCTTCATGGAGACAGTGGCTACAAGGTTTTCGTCACTTCTAACGATACTCAAGgtaTCTTTATAACAGGGTTGACTCAAGCACTACAGTCATTGACCCCCTATACTCTCCAATTTTGCAATAACACGCAACAATGGATATCTCCAAGAACTTTTGATGTTGACATTTTCATTGGATCCCACTTGGATATCCTCAAAATATTGAGCCATCGACAGCCCTCCCCATTACTTCTTGTGATGGATAATTGTCATGCGGTGTCAGAAGGAGGTTCAGTTATGAAGGACCTAGTAAACATTGCCAGACAACAGCCAAAGTGCATTATCATGGGTTTAACATCAGGTATTGTGGGTAGGAGGAGAACATGCATTTCAGATGTATATCAACTTTTAACTACAATGGAGGTAACATTTGGTGTCCAAGCTATTGTTTCTAGTGATTTACTTGCTGTAAACAAGTATGGAGAAAGACCTGAAGAGACATTGGTTGTAGCCTCGTCAATGACAAATGACATAATTAACAAGAACGTGTTAGAGTGTTTGCACGAGGCAAGGGATACACTGTCCTTTGCTAACAATGGTGAAAGTGTAGATGTTTTTAATCGCCTGTCATCCATGTTAGCGGAATGTGAAGATATATTAATAGATCTTGGTACCTTTAGTTCACTCAAGGCTTTGTCATTCACTAGTAGAGAATTTAACAAAGAAGGGAAGAAAGCAATAAAGGCCAAACAAGAAGACTTAGCAACCACCCTACAAATATGTGCAGCTAAACTAGACGAAGTGGTTAATACTGTGAAGAAAGAGTTTGATGGTTCTGCAGATATTCTATTGACAGATGTGACAAGAagaatttttcaatttttaacTTTGTTGGATAAAGAGAATTCTACATCCCCTACAGAACAAGTTGaattaagaaataaaaattttgaaagagTTCATTTTAAATGTCAAAATGATGACATTagtaaaattgaaattgcCAATCACACAACAAGGCCAATGCAAAGACCTGTTGCTGTGATTCTTGCAAAGTCTGAACTGCAAGCTCATGCCATAAACAGCCTTATCAGTTACATCTCTGATTTTACTCATCCATACCTCAAAACCAGAATTTTGTCAAATGACAAGATCAATCAGATGATTAACACTCACATGTCTTTAGATGACAAGGAGCCAGACCCCCTAGTAGGTGACATGACCATGCAGGGCATCTTGAATGGGTCCATTAATGTCCTTATTGTATGCCGTGAGGTAGAGCATCTACTGCGCCTATCTCAGTGCCGGCTGGTTGTCAGGTTCGGTGTCCCTAATGATTATATATCATATGTTGTTGTCAAGAACATTGCCAGAGAGCAAAATGCACATGTGATGTTTATAAAAACCAAGAGCGTGCAATGTCACGAGGAAAATACCTTTGTGgaaTTTCAGACATTGGAAGAAATATTCTATGTCAGAAGCTCACCACAGCCGGTGCATCATTGCACATCTGATCTGAAAGAGGACTCAGTATATACACCATTTGGCCCAGATGGGCCCTGTGTAACGGCAGATACATCCATCAGTCTCATCAATAGTTTTTGTAGTCAGTTCCACACTGATGGGTTGAGTAAAGCTATCCCACATTGCTGCAGCAGTGTGTTTGAGCAGGGAGAGCAGATCAAAGTGACTTCTACATTGTTTTTGCCAAGAAATTCTCCACTTAGCCAGCCATTCAAGGCCCACCTAACAGTTTCCAAACACAATCCTAAACATGAACCAGCAGTAGCTAAGCTGAGATGTGAGCAATTGGCAGCCCTAGAGGCGGTCAAAGCGCTTCATACTGCAGGGGAGCTAGACTCCAGTTTACAGCCATGCGCAAGGCGGCGAGAGCATGTGTTCAAGAGAAAAGACGAGACATGTCCTGACGAGATCGCGGATGGGAGTATAGGCCGGGCGGGATCGCTCAGGCGAAGACGTGCTTACAAGTGTAAGATTCCCTGTGTCTTCACCAACAGCCTTCCTGATCCTGGCCAATCATGCTATGTGTATGCGGTCCACCTTGTACTAACTAAGCCAGACTCGCATGAGAGGGCTGTTCGCTCACAAGGAACACGTTTAAAGGACCCTGAGAAGCGGCCTTTATCTTTAGGGATTATTCTCAACAAATCATTGCCAAAGCTCCCCGCATTTATTATCTACGACAGAGCAGGTGAGATGACTGTCTCTCTCAAGCATTGCTACAATACCATGCTCACTTCCCAACAACTCGCACTAATACAGCGCTTCCACCGATACGTGTTCACTGACGTCCTGAACCTCGAGAAAGGCGAGTCCTCGCTGAACTTCGAACCAAAAGAGAACAAGAATGGATGCTTCCTTGTACTACTCAGGAACACTGATCAGACTACGAACCCCGATAGGGAAGGTCAGACAAAGAACCCCTATGAAGAAGGCCAGACAACGAATCCCGATAGGGGAGGTCAAACAACGAATCCCGATGAGGCACAGGAAAATATCCGTAAAGGATTTGACGGCTTTCCAAAACTGAGTCAAGACGTTCATGCTTCAGGAGTTGAGAGGTGCGACAAAATCCCTTTAGACGGGGCGAATGGTAGCGCAACGGTCACAAGCAATGAGCTTCGTAGAACGCCGTGTAATGCAAATGGTAATAAGTATGATATTCGGCCTGAGATGGTTAACGAAGAAAATGTTCCAATCTTGGCCAAGCAAAATACCCACAATACTAATCCATCTTGGAAAATCGCATTCGGTTTCCTTTACTCTCTAGAAGATTCCGTGACCAGTTTTGATGACCCATGTGATCCTCCTCCTCCAATTACAAGCGACTTTGAAGTGTTTCGTGACAGTGTCGTCACGACAGCATACGCTCCTTCGAGATTGCGTTACTACGTGGCTGATATCCGCTATGATGAGAGTCCAACCTCACCGTTCCCCTCTCCGTCCGTCGCACCAACGTTCGGAGACTACTACAAGGATCGCTATGGCGTGGATCTGTCACGTGATCAGCCTCTATTGGATGTGGATCACGTGTCCTCGCGCCTGAACTTCCTTCGGCCTCGTTATAAAACAAGCAAGGGCAAAGATCTGGCTCTACCGGATGAGAAATCCAAAAGGTCGCAGAGGTCACGTGTGTCCTTGGTCCCAGAGATGTGTTCTATCCACCCTATACCGGGCTCACTGTGGCGTGACATCACTAACATGCCGTCTATTCTTTATCGTGTCGATGCTTTGCTTATAGCCGAGGAGCTACGCCAGAAATTAGCCGTCGAGGCGGGGATAGGTATGCCCGTCTGGCCTGAAGGACATGATCTACCTCAACTGTCCATCGAAGAGATGGTAGCAGGGCCAATTCACCCAGCTGCTGCCTCTAGCGACGTCACTGTACAGTGTTCCTCTTTCAGTGATCCAAATACTGCCGCTAAAACTTGCTCAGTAGTCAACACAAGTGTGCCTCTGGAGACTCGCTTGGGCAGCATGATCCTTAGCGATTCTACTGATGCGTGCACATGGGAGACCCGGAGAAGTCACTCGAATAAAGGGAGTGAAACTCCAGAAGTTGGCTTAAATGGCAAGAGAGTAAACAGCGCAGGAACCTGTTTAACAGGGGATGTAGACGCGAATGTATCTAAGGATCGTGAAACGCAGTTCGACCCTGGACCATCATCCACTCTTATCCTTCGAGCCCTGACCACAACAAGCGCCAACGATATCATAGATCACGAGCGCCTGGAGATCTACGGTGATGCTTTCATCAAGTACGCAATTTCCGAACTACTTTACAGCGATTTCCCCAATGTTAATGAAGGGAGGCTGTCTTTCTTACGCGGCCTACGCGTTAGCAATCAGCAGCTGTTCTATCTAGGTCGCAGCCGTGGCTTAGCGCCTTTGATACTTACTAAGCCGTTTGAGCCCGTTGGTAGCTGGGTGCCTCCAGGGTTCTCTTCTTCTTCCATGCGTAACGTCCACGAGACCCTGGACGTGAGTCCTCAACATGGAGTTAATGACGTTCTGAACATCGACGATGAAGACAGTTTAGATCATTCCGAGATCCAAGACATCAGCGGCAATGAATGCCGGGGAAACGTCGAACCAATGTTACTCCCACCGCACACGTTTACTGTTATATCCGATAAAACTGTTGCTGATACAATCGAGGCGTTGATAggcgcttgtttgatgtcgaGTGGGACGAATGCGGCGCTTAGGCTGATGAGATGGCTTGACATGGATGTCTCGTCTTGCCCTGATAGTAAACTCTCCAACCCTTCCACTGAGAGCTCGTCTGAAGACAAAGCACGAAGCATCTATCAGGAACCATGTATTACCAATCATATACCCTCGGCTACAGAGCTATCTGTTACAGATATCAAGCCTCCTCTAACCCCTTCCTTTTCAGGGAAGATGGATGTCCAGCTTTTCAAGCGAGCCGTACAAGAGCCACTCTCTACTCCTTTCATCTCAAAGCAGACGGATGATCTCCTTCGCGTACGTACTGCAAATGATCAACCCCCAGCCACTGTATGTTCGACTGCAGGGCAAGGGCTGTTTGAAAACGTTGAGCCATCCTCGACCTCAACAGTCTCCAAGCAGATGAAAGAACAACTTTCCGTGCATGCAGTGGACGAAAAACTTTTTGACAATGCATACTCGACCTCAGAGCATGACCTTTCTATCAACAAGCAACATCAAACTACTGCAGTCTTATCGGAACACCAACTTGGCGAACTTGCCCTCGTCGAGGCTTCATTGGGTTATACTTTCCGAGACAGGGATATTCTGCTTCAGGCGCTAACTCATACGTCTTACCCACGAGCCTACAGCTCCGTCAACAGCAGCTACGAACAGTTGGAGTTCCTGGGGGACGCCCTTCTCGATTACCTCGTCACACGACACGTGCTACAGAGGTTCCCACGTCTCTCTCCCGGTGCAATAACTGACTTGCGTTCTGCTGTGGTCAACAACTACAGCTTGGCGTGTCTGACCATCCAGCGCGACTTTCACAAGCACATGCGATCCATGTCGATGGCACTGTTCAAGGTCGTGAGGAGGTTTGTGCGAAGGCTGAGCGAGATAGAGGAAAAAGAGACGAGACCAGATCAGGTTTATTCCAAGCTTCTGCTCACCACAGTGGAGGATGGGAGAGGCGGCGAGGCCATAGAGGTCCCCAAGGTGCTCGGGGACTTGTTCGAGGCGCTCCTGGGTGCGCTATACGTGGATTGTGGAAGGGATGAGGAACTAGCATGGTCAGTTATCTACCCTCTCCTGACACCAATCATCGAGCACTACTCGGTCCATCTGCCTATCTCACCCACTCGGCAGCTCGTGGAAATGATGCCAGGCGCCGCCACATTCACCTGTCTGAGTCAAAACGTCATCGGCCATCACGCCTGTGAATTGGTTGTCAAGGGTTACGGGCGGTTCATGGGCACGGGCAGGAACGCCCAGATCGCGCGATCCACCGCTGCCCAGCACGCGCTGGCGCGCATAAAGagcaaacaaaagaaataaagactGAGAACAAACATCGAAAACAACAGATCATTGAGATTCATCCATTCGCAAAATGGAAATGTGCTAGCGGTTTCTTGAAGAACTCTTTCCCATTGGCATGACTTGAAGCAGATGTTCTACCGGGCCATGTTTACGACAATAAACTGCGACACTGTCATACGCAAGTTCAACTGTCATACGCAAGTTCATAGATTTTGATGTGCCATCGAACTGAGATTACCAGGTCTCAATATTCAGATGTCgcattttgttattgttgcaAGAAATTGGACTATGTAGTTTCTATTTCTTTACTCAAATTTTATTCTGTACTTTTAAAGATTTTCTAGTGAGCTTATTTTTTTGGTGAGCTTACATTCTGGCGAAATAGCAAATATTTGTCAGAGTTGGTACTGAGATGTTATTTTCCATGAAGATTTTATTGATTTTGgagttatttgtttttgttcgtATTTTTTGTCCTGTATTTCAAGAGATCGTTTCAACCATCGTAAAAAGCAAGCAACGTCCTGCAGTTAGCGAGACCAAGTGCCTTCTGTTGCCAAATAAACAGATCTTTATCGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6TV19	Endoribonuclease Dicer OS=Danio rerio OX=7955 GN=dicer1 PE=2 SV=2
A0A8J1LLF7	Endoribonuclease Dicer-S OS=Xenopus laevis OX=8355 GN=dicer1.S PE=3 SV=1
B3DLA6	Endoribonuclease Dicer OS=Xenopus tropicalis OX=8364 GN=dicer1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006466 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20932 all species →	Dicer_dsRBD	Dicer, dsRNA-binding domain	Domain	Interproscan
PF02170 all species →	PAZ	PAZ domain	Domain	Interproscan
PF20931 all species →	Dicer_platform	Dicer, platform domain	Domain	Interproscan
PF03368 all species →	Dicer_dimer	Dicer dimerisation domain	Domain	Interproscan
PF00636 all species →	Ribonuclease_3	Ribonuclease III domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036389 all species →	Homologous_superfamily	Ribonuclease III, endonuclease domain superfamily	Interproscan
IPR036085 all species →	Homologous_superfamily	PAZ domain superfamily	Interproscan
IPR000999 all species →	Domain	Ribonuclease III domain	Interproscan
IPR038248 all species →	Homologous_superfamily	Dicer dimerisation domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR044441 all species →	Domain	Dicer, double-stranded RNA-binding domain	Interproscan
IPR003100 all species →	Domain	PAZ domain	Interproscan
IPR048512 all species →	Domain	Dicer, platform domain	Interproscan
IPR005034 all species →	Domain	Dicer dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14950 all species →	DICER-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004525 all species →	Molecular Function	ribonuclease III activity	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0030422 all species →	Biological Process	siRNA processing	Interproscan
GO:0031054 all species →	Biological Process	pre-miRNA processing	Interproscan
GO:0016891 all species →	Molecular Function	RNA endonuclease activity, producing 5'-phosphomonoesters	Interproscan
GO:0004530 all species →	Molecular Function	deoxyribonuclease I activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006309 all species →	Biological Process	apoptotic DNA fragmentation	Interproscan
GO:0016442 all species →	Cellular Component	RISC complex	Interproscan
GO:0090501 all species →	Biological Process	obsolete RNA phosphodiester bond hydrolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032232624.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032232624.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

35TPM > 0

16Conditions

2.5Max TPM

0.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	2	1.23	2.48
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	0.95	1.34
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	0.81	0.94
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	0.71	0.85
whole 6 week old aboral regenerate · regenerate uncut	3	3	0.99	1.18
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	0.39	1.16
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	0.97	1.84
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	1.46	2.05
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	0.72	1.35
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	0.59	1.05
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	0.71	0.81
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	0.96	1.54
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	0.89	1.43
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	0.55	1.66
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	0.93	1.47
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	0.32	0.97

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	2.48
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	1.22
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	0.00
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.34
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	0.78
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	0.74
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.94
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.84
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.65
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.85
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.80
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.49
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.18
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.07
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.71
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	1.16
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	1.84
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	1.05
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.05
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	1.43
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.91
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	1.35
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.81
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	1.05
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.72
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.81
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.72
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.59
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	1.54
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	1.34
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	1.43
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	1.25
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	1.66
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	1.47
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	1.33
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.97
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.