Gene detail

Detailed information of XP_032233012.2 in Nematostella vectensis

Genomic Location: NC_064039.1:8527040...8544371
NR annotation: XP_032233012.2, double-stranded RNA-specific adenosine deaminase [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5508360

ATGCTACCTGGAGGAATGTTTGGCAATCTCGTGAACAAAAACGCTCGCGCTGCTCTCAAAGAGTACGGTGATATGAACGGAGTAGGAATCGAGTACGAAATGCTTGCTCCCGCCGGCCCATCGCATTCTCCCCAATACAGCGCCCGAGTTCGGGTCGGGGAGAGCAGTTTTGATGCAGCTACTGCGGCAACCAAGAAAGATGCCAAAGAGTTTGCTGCTGATCTTGCACTAAGAGCGTTGTCTCAAGAACCAGGAACCTTTGCCATGTACTCCCCTATCCCAGCAGTCCTTCCTGGCCTCTCACCCGATGGCGCTCCCCACCCCCAACATAGGACACCAGGGTTCCGCCCGAAGTACAACCAGCGCTACCGACAGCGCCCCAAAAACAACCAACTGTCAGCTCCACCTGACAAAGATCCCGTCATGTTGATCAACGAATATGGACAGAAGATGAGCCTGCAGGTAAAATTTGAAGATAGCCCTTGCTCATTTCCTGGCTTGTATGAATCTAAAGTCACTGTTGGAACACAAGAATTCGGGCCAAAGAGAAGTGCTCAGAAGAAAATGGCCAGGAAACTAGCGGCCATTGTTGGCCTGAAGGAACTGATAAACTGGGAGCCAAAAGAGGGGCTTTACTACTTGAATGAGGAGCCTGCTGTGCTGACATCCCTACCAGGCCTGGCACCTGAGGGCTCAGACTCTGAACAGAAAGGCGTTGTGTTGGACAAAGACCCAGTCATGTTGTTGAATGAATATTGTCAGCGTAGTCAGCTAAAGATAACCTATGAGGACAAACAACACAATGAGCCAGGCAACAAAAGGTCCTATTCCTGCAATGCCACTGTTGGGGACAGAACCTTTGAGTCTGGCAGAGGCTCGACCAAGAACAAGGCCAAAAAGGAAGCAGCTTTGCTGGCCCTCAAGACACTCTTTAACATGCAGATTCAGATGCCTCAATCAAGTAAAGGAGCAAAGAAATCAGTAGAGGAGCGTCACCCAGTTAGTGTGCTGAATGAGTTTGGGCAGAAACATAATCAAAAGGTTGAATTTGTGGACCTAGGATACACTGGGCCCGATCACAACAGGACCTACTCTTATCTGGCCACTGTGGGTGACCGTAAGTTTGATTGTGGCTACGGCAGAAGCAAGCAGGAAGCCAAGAAAGAGTGTGCCAAGATTGCTCTTGGGGTCCTTCTTGGGATCCCTGTGGAACCAGGTCCAGTTCAGCCAAGTGAATCTGTGCCAGGAGAAAATGGTGTTGTCCCAAAACAGCAAGGTGTGAAGAGCAGGGTTAGTGCACTCTATGAGTTTTGTCAGGCTTACCATCTTCCTCAGCCTGAACCCATTGAGGTCAAACATGAGTTCCGTGTCAACCCTGGTTCCCACTACATGGCGTTCAAAATTGGTGAACAGAGCTACCCTCCAGGTGAGGGTCGCACCAAGAAAGCTGCTAAAGAAATAGCAGCAGGCCATGCCCTGACAGAGCTTGAGAAAGCCAACACAGGCTCCATGTACTCTCCTGTTGGCAGCTGTGAAGGGGACCAGTTAGCTGCTCTAAGCTGGCAGTGCCTGACACTTATTAGTAACCATGCCGCAGAATCTTGGAGGCTGGCTGGCTACAAGGTGCTGGCGGCATTTATCATGCAGGATTCTTCCAATCCAAAGGGGACCGTCGTCAGCATTGGCACAGGAAATAAGTGTATTGGAGGTGACCAGTTGCGGCTTGAGGGCACAGTAGTGTTTGATTCCCATGCTGAGGTGATTGCCCGTAGAGGCCTGGTTCGCTTCCTGCTGTCTCAACTAAACCTGCTGTTTGAGAAGCCATCTGAATCCAAAAGCATCTTCCTGCCCAAGATCAAAGGCCAACAGATCAAGCTGCGGGAAGATGTCAAGTTCAGTTTGTACATCAGCACCGCACCCTGTGGAGATGCGTCAGTATTTGTCAGTGATACTGCAAGTGGAAGTGAGGGTGCTGACCAGCTGATGTTCGGCAGCAAGCAGCATGGTCTCCTGCGTACCAAGGTTGAGAAAGGAGAAGGCACAATCCCTCTGGACCCTGATGACAGCATCCAAACCATTGACGGCATCCGGCGAGGCCAGAGGCTACGCACAGCATCTTGTAGTGATAAACTGGCTAAGTGGAATGTGCTGGGTCTTCAGGGTGCTTTGCTGAGCAACCTCATTGAACCGATCTACCTAAACTCTCTTGTGGTCGGCAACCTCTTTGAGGCAAGCCATCTGACACGTGCAGTCAGTGCCCGCATCGAGCGTGAGGCAGTCAAACCCCTGTCCAGTCGACTGCCATCTCCGTATCGCGTCAACCTTCCCAAAATTCAGTGCGGCCGTTTGGCTCCTGTCGACAGCCCACGTGATGTGGAGACAAAGTCCAAGACGAAGAACTTGACACTGAACTGGTGTCTTGGTGATGAGAAGCGAGCTGAGGTGCTGGATGCCTGTCTTGGACGAGATCCTAACAACAGGGTTCCCTCACGCCTTTCTAAGATGGCGATTTACGCCAACTTCCTAGAAGTTGCCAAGAAAAACTCTGAGTACAAGAAAGTGGTAGAGGCCAAGTCGTACCGTAAGGCGAAAGATCAGGCGAGCGATTACCTGAACGCCAAGAACACCTTCTTCCAGCACATGAAGGAGGCTCAGTACGGGGACTGGGGACAAATGAAGAAACCAGTGGAGCTTAGTCAGTTCGCCTAA

Transcript

rna-XM_032377121.2

TAAGGAGCTCTCGAGTCATTTCTCGGCGGCCATGCTCTTGTAAGAAAACACATCAGTGAGAAAAGTCCCGCGTCTTTAGCTCGCTTCTTAGTGAAAAATCAGTGGAGATTTTTGTCACGACTTTGCTCAGTCAATCCCTCATGCTACCTGGAGGAATGTTTGGCAATCTCGTGAACAAAAACGCTCGCGCTGCTCTCAAAGAGTACGGTGATATGAACGGAGTAGGAATCGAGTACGAAATGCTTGCTCCCGCCGGCCCATCGCATTCTCCCCAATACAGCGCCCGAGTTCGGGTCGGGGAGAGCAGTTTTGATGCAGCTACTGCGGCAACCAAGAAAGATGCCAAAGAGTTTGCTGCTGATCTTGCACTAAGAGCGTTGTCTCAAGAACCAGGAACCTTTGCCATGTACTCCCCTATCCCAGCAGTCCTTCCTGGCCTCTCACCCGATGGCGCTCCCCACCCCCAACATAGGACACCAGGGTTCCGCCCGAAGTACAACCAGCGCTACCGACAGCGCCCCAAAAACAACCAACTGTCAGCTCCACCTGACAAAGATCCCGTCATGTTGATCAACGAATATGGACAGAAGATGAGCCTGCAGGTAAAATTTGAAGATAGCCCTTGCTCATTTCCTGGCTTGTATGAATCTAAAGTCACTGTTGGAACACAAGAATTCGGGCCAAAGAGAAGTGCTCAGAAGAAAATGGCCAGGAAACTAGCGGCCATTGTTGGCCTGAAGGAACTGATAAACTGGGAGCCAAAAGAGGGGCTTTACTACTTGAATGAGGAGCCTGCTGTGCTGACATCCCTACCAGGCCTGGCACCTGAGGGCTCAGACTCTGAACAGAAAGGCGTTGTGTTGGACAAAGACCCAGTCATGTTGTTGAATGAATATTGTCAGCGTAGTCAGCTAAAGATAACCTATGAGGACAAACAACACAATGAGCCAGGCAACAAAAGGTCCTATTCCTGCAATGCCACTGTTGGGGACAGAACCTTTGAGTCTGGCAGAGGCTCGACCAAGAACAAGGCCAAAAAGGAAGCAGCTTTGCTGGCCCTCAAGACACTCTTTAACATGCAGATTCAGATGCCTCAATCAAGTAAAGGAGCAAAGAAATCAGTAGAGGAGCGTCACCCAGTTAGTGTGCTGAATGAGTTTGGGCAGAAACATAATCAAAAGGTTGAATTTGTGGACCTAGGATACACTGGGCCCGATCACAACAGGACCTACTCTTATCTGGCCACTGTGGGTGACCGTAAGTTTGATTGTGGCTACGGCAGAAGCAAGCAGGAAGCCAAGAAAGAGTGTGCCAAGATTGCTCTTGGGGTCCTtcttgggatccctgtggaaCCAGGTCCAGTTCAGCCAAGTGAATCTGTGCCAGGAGAAAATGGTGTTGTCCCAAAACAGCAAGGTGTGAAGAGCAGGGTTAGTGCACTCTATGAGTTTTGTCAGGCTTACCATCTTCCTCAGCCTGAACCCATTGAGGTCAAACATGAGTTCCGTGTCAACCCTGGTTCCCACTACATGGCGTTCAAAATTGGTGAACAGAGCTACCCTCCAGGTGAGGGTCGCACCAAGAAAGCTGCTAAAGAAATAGCAGCAGGCCATGCCCTGACAGAGCTTGAGAAAGCCAACACAGGCTCCATGTACTCTCCTGTTGGCAGCTGTGAAGGGGACCAGTTAGCTGCTCTAAGCTGGCAGTGCCTGACACTTATTAGTAACCATGCCGCAGAATCTTGGAGGCTGGCTGGCTACAAGGTGCTGGCGGCATTTATCATGCAGGATTCTTCCAATCCAAAGGGGACCGTCGTCAGCATTGGCACAGGAAATAAGTGTATTGGAGGTGACCAGTTGCGGCTTGAGGGCACAGTAGTGTTTGATTCCCATGCTGAGGTGATTGCCCGTAGAGGCCTGGTTCGCTTCCTGCTGTCTCAACTAAACCTGCTGTTTGAGAAGCCATCTGAATCCAAAAGCATCTTCCTGCCCAAGATCAAAGGCCAACAGATCAAGCTGCGGGAAGATGTCAAGTTCAGTTTGTACATCAGCACCGCACCCTGTGGAGATGCGTCAGTATTTGTCAGTGATACTGCAAGTGGAAGTGAGGGTGCTGACCAGCTGATGTTCGGCAGCAAGCAGCATGGTCTCCTGCGTACCAAGGTTGAGAAAGGAGAAGGCACAATCCCTCTGGACCCTGATGACAGCATCCAAACCATTGACGGCATCCGGCGAGGCCAGAGGCTACGCACAGCATCTTGTAGTGATAAACTGGCTAAGTGGAATGTGCTGGGTCTTCAGGGTGCTTTGCTGAGCAACCTCATTGAACCGATCTACCTAAACTCTCTTGTGGTCGGCAACCTCTTTGAGGCAAGCCATCTGACACGTGCAGTCAGTGCCCGCATCGAGCGTGAGGCAGTCAAACCCCTGTCCAGTCGACTGCCATCTCCGTATCGCGTCAACCTTCCCAAAATTCAGTGCGGCCGTTTGGCTCCTGTCGACAGCCCACGTGATGTGGAGACAAAGTCCAAGACGAAGAACTTGACACTGAACTGGTGTCTTGGTGATGAGAAGCGAGCTGAGGTGCTGGATGCCTGTCTTGGACGAGATCCTAACAACAGGGTTCCCTCACGCCTTTCTAAGATGGCGATTTACGCCAACTTCCTAGAAGTTGCCAAGAAAAACTCTGAGTACAAGAAAGTGGTAGAGGCCAAGTCGTACCGTAAGGCGAAAGATCAGGCGAGCGATTACCTGAACGCCAAGAACACCTTCTTCCAGCACATGAAGGAGGCTCAGTACGGGGACTGGGGACAAATGAAGAAACCAGTGGAGCTTAGTCAGTTCGCCTAAAAcccaccacagggagcccgtgaGCTAGCGAGAGGAATGTAGACTAACGGGCGTTGAATATTTTAGTATTGCCAGATATCCCACAAGTAGAAATGAAACTAAAGTAAAGAAGGCCAAAGTCGACgcattaacagcggcaaaaccaTTCCCTACACTCCCAAACCTTGATGTGCCTAAAAGATTTCACAAGCCTCCTTTAACCTCGCGTCAAAGTAAAAGAAGGTTTCAAGGCACAAGAAAATGTAGCTGATAAGAATGCACCAAGCTCTATACACCATGAAACTCGATATTTTGGTCGTGCTAGGGGGCTGTTATAGCATCGTCGCGCAGCGTTTCTAATGTATTTTTCAATATTCGCGTCATCAgaagcatttttattttattttattactcGGCTCAGTCCTTGTTTTAGAATAGCACTTGACGTATATCTTTAAAAAGCACTAATATCGATCGCGTGTTTTAAAATGCAACAGTATGTTCTTAGAGCCTAAAAATGCGTGTCTTATGCGGCTTATCTGGGAAGTTGTTGTCATGGTAATCATGGTGATCAAAGTTGTCATGGTAATCGCGGTTATCATGGTGATCAAAGTTGTCATGGTAATCGCGGTTATCATGGTGATCAAAGTTGTCATGGTAATCACGGTGATCAAAGTTGTCATGGTAATCACGGTTATCATGGTGATCGAAGTTTTCATGGTAATCACGGTTATCATGGTGATTAAAGTTGTCATGGTAATCACGGTTTGTATGTTAGCGTTGTGGTCTGATGACATAGCAACCCTATAAATGGCCTGCCTGTCTTCTTTGGTTAAATGAAAACTGAATAAGACTATATGACTGTAATAGCGTCGTAGCGTTGATGACTGTACGTTAATCTTACAAGATCAAGGTAAGCTTTATCTAACAGTAGAAATAGAATAAGAGAAGTTTGTATTCGTGTAATGATCGTAGTGAAATATAATTTGCAGCTAAACTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P55265	Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens OX=9606 GN=ADAR PE=1 SV=4
Q99MU3	Double-stranded RNA-specific adenosine deaminase OS=Mus musculus OX=10090 GN=Adar PE=1 SV=2
P55266	Double-stranded RNA-specific adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Adar PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001415 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00035 all species →	dsrm	Double-stranded RNA binding motif	Domain	Interproscan
PF02137 all species →	A_deamin	Adenosine-deaminase (editase) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014720 all species →	Domain	Double-stranded RNA-binding domain	Interproscan
IPR002466 all species →	Domain	Adenosine deaminase/editase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10910 all species →	EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003725 all species →	Molecular Function	double-stranded RNA binding	Interproscan
GO:0003726 all species →	Molecular Function	double-stranded RNA adenosine deaminase activity	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006382 all species →	Biological Process	adenosine to inosine editing	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008251 all species →	Molecular Function	tRNA-specific adenosine deaminase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004000 all species →	Molecular Function	adenosine deaminase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032233012.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032233012.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

16Conditions

140.3Max TPM

108.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	104.23	118.00
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	91.20	112.93
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	107.30	111.49
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	111.55	115.86
whole 6 week old aboral regenerate · regenerate uncut	3	3	94.46	95.11
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	106.19	123.58
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	116.36	129.16
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	116.79	123.67
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	108.48	115.46
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	109.40	112.47
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	107.05	113.44
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	118.42	136.12
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	101.22	105.41
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	115.32	122.83
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	109.98	124.95
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	117.50	140.27

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	118.00
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	111.94
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	82.75
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	112.93
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	81.56
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	79.11
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	111.49
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	109.00
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	101.42
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	115.86
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	110.77
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	108.01
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	95.11
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	94.95
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	93.34
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	123.58
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	108.52
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	86.46
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	129.16
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	117.37
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	102.54
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	123.67
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	121.33
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	105.36
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	115.46
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	108.82
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	101.15
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	112.47
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	108.24
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	107.48
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	113.44
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	107.84
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	99.86
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	136.12
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	117.27
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	101.87
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	105.41
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	104.84
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	93.43
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	122.83
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	111.58
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	111.54
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	124.95
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	116.16
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	88.82
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	140.27
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	114.50
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	97.72

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.