Gene detail

Detailed information of XP_032233153.2 in Nematostella vectensis

Genomic Location: NC_064035.1:19748868...19763810
NR annotation: XP_032233153.2, serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5508503

ATGGATTGGGTCGGAGCAGGCCCTCTTGGAGATGAGGATGTTGAAGAACTGCGCTCTGAGCGCTCAATACGAGGACTCAAGTCACCTGAAGAGATAGAAAGGCTCACAGTGGACGAAAATCTCGATACCGTAGAGCGAGCAGTTCTTCTTGTAAGCTCTGGTGTGGAAATTCAAAAACTTAGTGTGATCACTAACCTTCCAAAGCTTCTGGAGACAAACAGTGCAGATGTTAATCGAAGAGTTGTACCTTTACTAAGAGAATATTTATATATAGCACCAGTGCATATCCAGCTATCAGCCAATAAATCCTTTGTGAAGATCCTCCAAAATACTTCACTCCCAACATATTTATTTGCATCATCATTCCTGCCCATTATTTTGCACAACATTGACAACAAAGACTCAGTTATAGGTAATGCCTGGCTAGACACACTACTCATCTCTATAGACTATCTGCCCAAGGATGTTATTAAACGAGAGGTCTTGCCTGTTGCTATATCCAAGGGACAACTTTCACAGTCAGTCAGCTCTCGGCTTGCAAGCTGTAAACTACTTGGACATATTGCTCCAAAATTTGAGCCATTCTGGATTAAAAAGGAAATCATGACTCTGGTTACTTCACTTTGCCAAGATGTTGATTATGAAGTCAGAGCCTGCATGTGTCAGGAGTTGGAATCAATTGCAAGAGCTCTGGGAACTGAGACAACCAAAACTTCTGTCATTCCTGAGCTTGTAGAGCTGACGAATGATGAGGAGACTAGTGTTCGACTTTCTGGTATGGAGACGATTACCAACCTGCTCAACCTTCTTGATGATGATACTTGCACAAGTACTATAATACCATTGGTAAAAAGGTTCTGTGAAAATGCACCAAAATCTTCAAAGGAGTCTCTCATAATGGTAGCCAAGCTACTTGGAAAATTGTGTCATGGACTTTCAGTGAACTTTGATGAAGTCCAGAAAAAATGGTTCCTTGACTATTATCGAAGAATTAGCAAATGTGGAAGTCCAAATAAGAATAACAGAGTTGGAAGCCTGTCACTGGCATTACAGAGTTCAAGTTTGTCCGGAGCAACCATTCATGATGATGATGACGCAGAGTGCCGTAGATGCTGTGCTTTCAATTTACCTGCCATGGTGCTATTTGCTGGCCCAAAGAATTTTAGTGCAGAGCTGTACCCGACTTTCAATGCCCTGGGAGGTGACCCTCATGCGTTGGTGCGCAGGACAATAGCATGTGGAATACATGAGGTCGCTAAGTTATTAGGCTCAAATGCTGGATTAATACAACAAGATTTAGGGTTATTATTAAAAGATGAATCTATTGAGGTTCTTCAAGGCCTTATTCATAATTTACCAGAGAGCTTGGAGTGTCTAGCTACATGCGGGCTTACATCCAAGTTGAATAATTTGTCAGACGTCATCCCTTCACTGGTGGCGTGTGAGCTGGCGATTGCATCTTCCAGTAACTGGCGTTTGCATGTGGAACTACTTGAAAAGTTTGCATGCTTCCCAAATTGCTTGAGTTCAGATCAGATCTACTACAAGTTTGTGCCCCTTTTATTCAGGCTGCTCTCTTCAAATCGAGTTTTACCTGTAAAGCTGGCAGCAGCACGCACATTGTGCGTTTTTATCCGGTACAACAGACGGTATGAGCAGCGCCAGGAATTGTGCTGCAGACTGATACAAGAATGTGGTCGTGGCAAAAGTTATCGAGCACGACTCCTATTCATTGACATTTGCAAGTTTATAATGGAATTATTCTCAAGAAGTTTCTTCAAGGAGAATTTCTTCGAGTTTTTATTGGAGCTAGCATCGGATAAAGTACTTAATGTGCGGCTCAAGTTTTGCTCAGTTCTGCCGACGCTCAAGTCCGTGCTGAAGCTCTCGGATCGTGTGCTCTTGCAACAGCTGGAGCAGTGTGTGCGCCGCCTGCTCAGCTCAGAGCAAGAGCCTGACGTGTGTGCTGCAGTTCGCGATGCGGTGATGAAGTTAGATAAAATCGAGATCGTCATGGATACGATGTCACGCCGGACGATGTTCGAAGATGATGTGAACGACCAGAAGAAAGAGGAGGAGGAAAGGCTGTTAATAGCAATGGAGGAAAAGGAGCGCGAAGAGTTGGGCGGAGGCCGCCAGCAATCAGACGCCAGGAAGAAGTCGAGAGGGGATGACAAACTGGTGAAGAAAGGCTCACTCAAGTCTAAAACGGGTAAAGAGCAAGTGAAGAGAACAACTTCAGGCTCCCACCCTTCCTTAGCAGGGGGGGCCTCGTCATCCAAACAATCTCAGAAGTCTTCCGTCACCTCGAAAAGCAGTAGCTCACCCAAGAGCTCTCCATCGTCAAGTCTACAGCGACTCCCTAACATCTCTTCGGCTTTGCCTTCTGTGCCTTCGACGTCTAGCTCTAGTAGTATAGGAGGCACGGTGCGGAAAAACTCTCCAAGTGCGAGCAGTCTTGCCGCACGAGTATCCATCGCCAACGCCGCCAAGAGCAACTCTAAAAACACGAAGCCAGACAGATCTGAACGAAGCACTGGATCAAAGAATAAACGTCTGACAGCTGGGTCCTACATGAAATCTTGA

Transcript

rna-XM_032377262.2

GGTAATTTCCAGGGCGCGAGAGGAAAGTTTACCGAAGAAAGAGCGTCAATGGACTCGCTGTAGCGATGGATTAGACCACactttgtgttgtttttggCCGAATATGGGCGGCCATGTTTAACCCAAATACGATTTATAAAAGAATTGTAGCTCCCAAAATGAAATGGAGCTGGCAAAGCCCTATTAAGTTGTGACATGGATTGGGTCGGAGCAGGCCCTCTTGGAGATGAGGATGTTGAAGAACTGCGCTCTGAGCGCTCAATACGAGGACTCAAGTCACCTGAAGAGATAGAAAGGCTCACAGTGGACGAAAATCTCGATACCGTAGAGCGAGCAGTTCTTCTTGTAAGCTCTGGTGTGGAAATTCAAAAACTTAGTGTGATCACTAACCTTCCAAAGCTTCTGGAGACAAACAGTGCAGATGTTAATCGAAGAGTTGTACCTTTACTAAGAgaatatttatatatagcACCAGTGCATATCCAGCTATCAGCCAATAAATCCTTTGTGAAGATCCTCCAAAATACTTCACTCCCAACATATTTATTTGCATCATCATTCCTGCCCATTATTTTGCACAACATTGACAACAAAGACTCAGTTATAGGTAATGCCTGGCTAGACACACTACTCATCTCTATAGACTATCTGCCCAAGGATGTTATTAAACGAGAGGTCTTGCCTGTTGCTATATCCAAGGGACAACTTTCACAGTCAGTCAGCTCTCGGCTTGCAAGCTGTAAACTACTTGGACATATTGCTCCAAAATTTGAGCCATTCTgGATTAAAAAGGAAATCATGACTCTGGTTACTTCACTTTGCCAAGATGTTGATTATGAAGTCAGAGCCTGCATGTGTCAGGAGTTGGAATCAATTGCAAGAGCTCTGGGaactgAGACAACCAAAACTTCTGTCATTCCTGAGCTTGTAGAGCTGACGAATGATGAGGAGACTAGTGTTCGACTTTCTGGTATGGAGACGATTACCAACCTGCTCAACCTTCTTGATGATGataCTTGCACAAGTACTATAATACCATTGGTAAAAAGGTTCTGTGAAAATGCACCAAAATCTTCAAAGGAGTCTCTCATAATGGTAGCCAAGCTACTTGGAAAATTGTGTCATGGACTTTCAGTGAACTTTGATGAAGTCCAGAAAAAATGGTTCCTTGACTATTATCGAAGAATTAGCAAATGTGGAAGTCCAAATAAGAATAACAGAGTTGGAAGCCTGTCACTGGCATTACAGAGTTCAAGTTTGTCCGGAGCAACCattcatgatgatgatgacgcaGAGTGCCGTAGATGCTGTGCTTTCAATTTACCTGCCATGGTGCTATTTGCTGGCCCAAAGAATTTTAGTGCAGAGCTGTACCCGACTTTCAATGCCCTGGGAGGTGACCCTCATGCGTTGGTGCGCAGGACAATAGCATGTGGAATACATGAGGTCGCTAAGTTATTAGGCTCAAATGCTGGATTAATACAACAAGATTTAGGGTTATTATTAAAAGATGAATCTATTGAGGTTCTTCAAGGCCTTATTCATAATTTACCAGAGAGCTTGGAGTGTCTAGCTACATGCGGGCTTACATCCAAGTTGAATAATTTGTCAGACGTCATCCCTTCACTGGTGGCGTGTGAGCTGGCGATTGCATCTTCCAGTAACTGGCGTTTGCATGTGGAACTACTTGAAAAGTTTGCATGCTTCCCAAATTGCTTGAGTTCAGATCAGATCTACTACAAGTTTGTGCCCCTTTTATTCAGGCTGCTCTCTTCAAATCGAGTTTTACCTGTAAAGCTGGCAGCAGCACGCACATTGTGCGTTTTTATCCGGTACAACAGACGGTATGAGCAGCGCCAGGAATTGTGCTGCAGACTGATACAAGAATGTGGTCGTGGCAAAAGTTATCGAGCACGACTCCTATTCATTGACATTTGCAAGTTTATAATGGAATTATTCTCAAGAAGTTTCTTCAAGGAGAATTTCTTCGAGTTTTTATTGGAGCTAGCATCGGATAAAGTACTTAATGTGCGGCTCAAGTTTTGCTCAGTTCTGCCGACGCTCAAGTCCGTGCTGAAGCTCTCGGATCGTGTGCTCTTGCAACAGCTGGAGCAGTGTGTGCGCCGCCTGCTCAGCTCAGAGCAAGAGCCTGACGTGTGTGCTGCAGTTCGCGATGCGGTGATGAAGTTAGATAAAATCGAGATCGTCATGGATACGATGTCACGCCGGACGATGTTCGAAGATGATGTGAACGACCAGAAGAAAGAGGAGGAGGAAAGGCTGTTAATAGCAATGGAGGAAAAGGAGCGCGAAGAGTTGGGCGGAGGCCGCCAGCAATCAGACGCCAGGAAGAAGTCGAGAGGGGATGACAAACTGGTGAAGAAAGGCTCACTCAAGTCTAAAACGGGTAAAGAGCAAGTGAAGAGAACAACTTCAGGCTCCCACCCTTCCTTAGCAGGGGGGGCCTCGTCATCCAAACAATCTCAGAAGTCTTCCGTCACCTCGAAAAGCAGTAGCTCACCCAAGAGCTCTCCATCGTCAAGTCTACAGCGACTCCCTAACATCTCTTCGGCTTTGCCTTCTGTGCCTTCGACGTCTAGCTCTAGTAGTATAGGAGGCACGGTGCGGAAAAACTCTCCAAGTGCGAGCAGTCTTGCCGCACGAGTATCCATCGCCAACGCCGCCAAGAGCAACTCTAAAAACACGAAGCCAGACAGATCTGAACGAAGCACTGGATCAAAGAATAAACGTCTGACAGCTGGGTCCTACATGAAATCTTGATATTGACACAGACTGTAGACTCGGCATAGAGGAAGAGAAGATGAGCGACCTCGACTCAAGGGCTCCCCGCCGCGCCCAAACTGCACGTTTTGTGCTTCAGGGCCCACAAATATGAATGAGTGGCGCACGTGCTGCAGTTATGAGGTTCATCCTCGCTACAAATCTAGGGTTATTCATACCAAAGTATGACATAAAGGATCGTGGCGTCCTTTATTTAGTTTGTATATATTGTTACAGAATTTATGGCCATTTGACGGGTTTGAGCGAAGACCTAAGGTCCACACCTTCACGcgaaatgtatttattttgtcACCCTCCGTTCCCTGTGATACACATATAGGGTCATACCGTTTTCCTGGACTTCAGTGCGTTTGAATATTTGTTGCTAGACTGTGGCACGACCAAAGTCGGGCGACTTTTAATGGCCTGAGAATAtgtgcatatattagccagaCAAATAAGAGGTTTAATAAAAAGCAATATAACATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NUP7	Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PPP4R4 PE=1 SV=1
Q8C0Y0	Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Mus musculus OX=10090 GN=Ppp4r4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005558 (this species only)

Pfam domain

No Pfam domain signature was detected for XP_032233153.2. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR039918 all species →	Family	Serine/threonine-protein phosphatase 4 regulatory subunit 4	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21467 all species →	PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0008287 all species →	Cellular Component	protein serine/threonine phosphatase complex	Interproscan
GO:0019888 all species →	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0032515 all species →	Biological Process	obsolete negative regulation of phosphoprotein phosphatase activity	Interproscan
GO:0080163 all species →	Biological Process	obsolete regulation of protein serine/threonine phosphatase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15426	PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032233153.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

43TPM > 0

16Conditions

18.3Max TPM

12.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	14.54	16.31
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	12.86	17.13
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	15.87	16.44
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	15.81	16.53
whole 6 week old aboral regenerate · regenerate uncut	3	3	14.00	15.97
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	14.19	16.23
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	14.96	16.44
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	14.01	16.08
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	9.21	16.17
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	12.56	13.61
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	11.96	12.94
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	9.89	16.24
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	15.72	18.29
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	5.04	15.13
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	15.07	15.87
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	8.96	14.61

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	16.31
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	15.42
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	11.88
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	17.13
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.82
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.63
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	16.44
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	16.28
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	14.89
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	16.53
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	15.97
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	14.92
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	15.97
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.57
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	11.47
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	16.23
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	13.20
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	13.16
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	16.44
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	14.51
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	13.94
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	16.08
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	13.63
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	12.33
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	16.17
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	11.45
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	13.61
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	12.46
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	11.61
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	12.94
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	11.65
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	11.30
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.24
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	13.44
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	18.29
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	15.60
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	13.28
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	15.13
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	15.87
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	15.06
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	14.28
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	14.61
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	12.28
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.