Gene detail

Detailed information of XP_032233174.2 in Nematostella vectensis

Genomic Location: NC_064046.1:196951...213662
NR annotation: XP_032233174.2, serine/threonine-protein phosphatase 4 regulatory subunit 1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5508551

ATGCATGTCTATTGCAACTTCAAGATGGCGGATATACGCTTTTTAGTAGAGGATATCGACGATGCAGATGATGATCAAGATGACGGATGTGATATGGAACAAGACGATCCATCAGTGCTCGACCAAATAGGCCCGGAAGAACTTCTGAGCCCCATAATAAGAATGGAGAAATACATGCACAGCGATGTGATATTCAATAGGCAAATGGCTGCCAGGTATACGAAGGAAGCCCTGAAAGCCTGTCGGACCAAGGACGACATTTACCATGTTTTGCGTTTGATCGTTCGCCTATCCGAGGACATCGAACCATGTGTTCGTGTGGAGCTGATGGACCAAATCCCTCACGTTGCCCTGTTCTGCTACGAGCACTACTCCATGATGGAGGCAGTACCCCAGTATATCCTTTACATTGTGCTGCGGTACTTGATGGACTCAAACAACCAGGTTCGCAAGGCCAGCCAGCAAGTTTTGCTTGAACTGCTAGAGCATGAACTAGTGGAAAGAGCCGATGTGGAAGATCAAGTGTGCCCCGTGCTGATGCAGTTGACGGCAGGTGACAGTAGTGACGACTACCGATCAGAGGCTGTCACGTTGATGAGCAAGATGTCTTCTCTTGTTGGAAAGGACATTACGGAGCGTTTCTTCATGCCACGATTCGAAGTTCTTTGCTCTGACCCACTGTTCCATGTTCGCAAGGTTTGTGCTTCAAGCTTTGGTGAGATCTGCAACGTTGTCGGTCCAGAGCTTACAACAGACAAACTGCTTCCTGTGTTCTTCCGCCTGTGTCAGGACGGTGTATGGGGTGTAAGGAAGTCATGTGCAGAGACGTTCATGAGTGTGTCTGCGGCGAGCCCGGAGGAAGTAAGAGGAAACGACCTGGCTGAGGTTTTTATCAGTCTTCTGTGCGACAAGTCTCGATGGGTACAAATGGCAGCATACCAAAACCTTGGCCCGTTTATCTCCACATTTGCTAACCCGGCCAAGAGTGGGTTCTATATTGATGATTATGGCATGCTGTGCCCTGTGCCGCGCAGCGAGGAGGCTCGCACAGCCGCTGAGTCGACGACTTATGAGAACACTGCCTCTGATGAAGGAGTTGATAGTTCTTCAAGTAAGGACCACGCCCACAGGGAAAGAGGCTCCTCCCCGGAGGCCACCACAACAGATTCTGGCTACATCTCCCCTCCTGATATGGCAACCGAACATGCCGATACCTGCCAATCAAACAAGGATGGGTCATGTGACTTAGAGGCAGCACATGGGAACTGCTCTTCAACCAATAGCTATGACAGCTGCCAGTCAGACAGTCAGAGTGATAACTGTCAATCAAGTGAAGGGAACTGTCAATCAATGGATAAGGGTAGCAACTGCCAATCAACAGATAAGGGTAGCAACTGCCAATCAACAGAAAAGAGTGACAGCTGTCAGTCAAGTGAAAAGAGCAGGTCCTCAAATGGGTGTACTGTGTCCGGGTTTTGTTCTGTCCCAACGACAGATCTAGATGCTGATTTGGATGAGAACTATTTCAATTCCTTTCTATATTGGAGAAGTCCTTTGCCGCAAGTTGAGGTAGAACTGGATAGCATTAATGATAAGGATAAGGAGGACGATGATGGTGATGAAGATGATGGTGATGGTAATGATAAAACTGAGGATTTGCAGATGAAGAGTTCTGTGCAAGGTTCTACAAACAAGAGTGAAGCTCTCAGACAGACTCCGCCCAAGAGCCCACACCTCTCGTTTGGTCACAACAGTGACAGCGACGAGGAGGAGCACATGCCGATCTTCTCCCTGACGGACGACCCTCACGACTTTGATTATGATGACTACCATGAGTTAAAGCTTAGGAGGTCATCATCATACGATGATGATCTTTTGCTTGACGGCATGGTCACCCCACACCAGGATATGATCCCACAAAATCTACTTGACCATTACATCTCGATGACAGAGCCAACCAAGGCACAGACGATAGACACAGAGATTGCACGGCACTGTGCCTTCAGCTTTCCTGCTGTCACTCTCACCCTTGGACGGGAGAACTGGGCGTGTCTGCGAGACACCTACGAACTGCTGGCTTCAGATATGCAGTGGAAGGTCCGTCGCACTCTAGCCTTTTCCATCCATGAACTTGCCCAAGTCCTTGGGGAAGACCTGACCAAGACAGAGCTTGTTCCAACCTTCAACAGTTTTCTCAAGGACCTGGATGAGGTCCGAATTGGAGTCCTTAAACATCTGGCTGATTTCATCAAGCTTCTGCCGCTGGACGTTCGTGTGGGTTATCTCCCTGTACTGGTTGAGTTCCTCTCAACTGATAACAACAGGAACTGGCGATTCAGACAAGAACTGGCTGAGCAACTGATGTACCTATCAGACCTTTATACCCCTGCCGCAGTCCAACAGTTCATCTGTCCCATAGCCATCACCCTAGCCACTGACCGTGTTGCTGATGTCAGAACTATAGCATTCAGATTGATTGGTGTGTTGTTGCGGCGGTTGCATGGTTGCAAGGATGACAGCTCTGTTCGCAAGTTTGTGTCGGACATCATCATCAAGTTTGCACACAGCCAGCAGTGGACAAGACGACAAGCTTATGCTCAGCTTTGTCAGAACATGCTGGAGGAAAATGCTGAGAGTGGACCGCACTTTTGTGAGGAATTCCTCCCAAACCTTCTCAGTCTTTTATCAGACAAAGTGCCCAATGTCCGGCTGGCCGTGGCCCGGACACTAACCCACAGCGTGCTGAACTGTGATTACCTTCAGAATCCGGAATGTAAAGAAAGGGACATCGTAACTGGCGCACTGCGCAAGCTCCAGTCTGACTCTGACAGGGATGTCCGCTACTTTGCTGGCAGCAAAGAGGACTGGGACGAGAATCGGGAATACTCTACACAGGGTGCCCACAACAGTAGTGTCGGAAGGGAGTGTCGGAAGGAAGGTTCTGGGGAGAGCGGTGATAATACAGAGCAAGTCGACATGGAGGAGGAGGGGATTGATACTCTACAGACAAGCCAACAAATAGCGCACCTTGAGAATCAGATAGCCGAGGAGCTTAGCAAGGAATTCCAGGACAATTCCAATATGGAGTTAGAGAAAGTAAGCTCAGGTCATATTAGTATAGTTGGTGACGAGGTATCTAGCTCAACTCAAGAGGTCTGTGAAGAGAAACCAAGGGAGGATGGGGAAGCAAAGAAAGAGAGTGTCGAGATGGTGGCCAAGAAAGGGGACATGGTGCCGGACACCGCCCAGGACACACTGGAAACTGGACTTGACAAAGCAGAGGCTTGCACTTGA

Transcript

rna-XM_032377283.2

AGGTCACGTGATAAATGCATGTCTATTGCAACTTCAAGATGGCGGATATACGCTTTTTAGTAGAGGATATCGACGATGCAGATGATGATCAAGATGACGGATGTGATATGGAACAAGACGATCCATCAGTGCTCGACCAAATAGGCCCGGAAGAACTTCTGAGCCCCATAATAAGAATGGAGAAATACATGCACAGCGATGTGATATTCAATAGGCAAATGGCTGCCAGGTATACGAAGGAAGCCCTGAAAGCCTGTCGGACCAAGGACGACATTTACCATGTTTTGCGTTTGATCGTTCGCCTATCCGAGGACATCGAACCATGTGTTCGTGTGGAGCTGATGGACCAAATCCCTCACGTTGCCCTGTTCTGCTACGAGCACTACTCCATGATGGAGGCAGTACCCCAGTATATCCTTTACATTGTGCTGCGGTACTTGATGGACTCAAACAACCAGGTTCGCAAGGCCAGCCAGCAAGTTTTGCTTGAACTGCTAGAGCATGAACTAGTGGAAAGAGCCGATGTGGAAGATCAAGTGTGCCCCGTGCTGATGCAGTTGACGGCAGGTGACAGTAGTGACGACTACCGATCAGAGGCTGTCACGTTGATGAGCAAGATGTCTTCTCTTGTTGGAAAGGACATTACGGAGCGTTTCTTCATGCCACGATTCGAAGTTCTTTGCTCTGACCCACTGTTCCATGTTCGCAAGGTTTGTGCTTCAAGCTTTGGTGAGATCTGCAACGTTGTCGGTCCAGAGCTTACAACAGACAAACTGCTTCCTGTGTTCTTCCGCCTGTGTCAGGACGGTGTATGGGGTGTAAGGAAGTCATGTGCAGAGACGTTCATGAGTGTGTCTGCGGCGAGCCCGGAGGAAGTAAGAGGAAACGACCTGGCTGAGGTTTTTATCAGTCTTCTGTGCGACAAGTCTCGATGGGTACAAATGGCAGCATACCAAAACCTTGGCCCGTTTATCTCCACATTTGCTAACCCGGCCAAGAGTGGGTTCTATATTGATGATTATGGCATGCTGTGCCCTGTGCCGCGCAGCGAGGAGGCTCGCACAGCCGCTGAGTCGACGACTTATGAGAACACTGCCTCTGATGAAGGAGTTGATAGTTCTTCAAGTAAGGACCACGCCCACAGGGAAAGAGGCTCCTCCCCGGAGGCCACCACAACAGATTCTGGCTACATCTCCCCTCCTGATATGGCAACCGAACATGCCGATACCTGCCAATCAAACAAGGATGGGTCATGTGACTTAGAGGCAGCACATGGGAACTGCTCTTCAACCAATAGCTATGACAGCTGCCAGTCAGACAGTCAGAGTGATAACTGTCAATCAAGTGAAGGGAACTGTCAATCAATGGATAAGGGTAGCAACTGCCAATCAACAGATAAGGGTAGCAACTGCCAATCAACAGAAAAGAGTGACAGCTGTCAGTCAAGTGAAAAGAGCAGGTCCTCAAATGGGTGTACTGTGTCCGGGTTTTGTTCTGTCCCAACGACAGATCTAGATGCTGATTTGGATGAGAACTATTTCAATTCCTTTCTATATTGGAGAAGTCCTTTGCCGCAAGTTGAGGTAGAACTGGATAGCATTAATGATAAGGATAAGGaggacgatgatggtgatgaagatgatggtgatggtaatgataaaACTGAGGATTTGCAGATGAAGAGTTCTGTGCAAGGTTCTACAAACAAGAGTGAAGCTCTCAGACAGACTCCGCCCAAGAGCCCACACCTCTCGTTTGGTCACAACAGTGACAGCGACGAGGAGGAGCACATGCCGATCTTCTCCCTGACGGACGACCCTCACGACTTTGATTATGATGACTACCATGAGTTAAAGCTTAGGAGGTCATCATCATACGATGATGATCTTTTGCTTGACGGCATGGTCACCCCACACCAGGATATGATCCCACAAAATCTACTTGACCATTACATCTCGATGACAGAGCCAACCAAGGCACAGACGATAGACACAGAGATTGCACGGCACTGTGCCTTCAGCTTTCCTGCTGTCACTCTCACCCTTGGACGGGAGAACTGGGCGTGTCTGCGAGACACCTACGAACTGCTGGCTTCAGATATGCAGTGGAAGGTCCGTCGCACTCTAGCCTTTTCCATCCATGAACTTGCCCAAGTCCTTGGGGAAGACCTGACCAAGACAGAGCTTGTTCCAACCTTCAACAGTTTTCTCAAGGACCTGGATGAGGTCCGAATTGGAGTCCTTAAACATCTGGCTGATTTCATCAAGCTTCTGCCGCTGGACGTTCGTGTGGGTTATCTCCCTGTACTGGTTGAGTTCCTCTCAACTGATAACAACAGGAACTGGCGATTCAGACAAGAACTGGCTGAGCAACTGATGTACCTATCAGACCTTTATACCCCTGCCGCAGTCCAACAGTTCATCTGTCCCATAGCCATCACCCTAGCCACTGACCGTGTTGCTGATGTCAGAACTATAGCATTCAGATTGATTGGTGTGTTGTTGCGGCGGTTGCATGGTTGCAAGGATGACAGCTCTGTTCGCAAGTTTGTGTCGGACATCATCATCAAGTTTGCACACAGCCAGCAGTGGACAAGACGACAAGCTTATGCTCAGCTTTGTCAGAACATGCTGGAGGAAAATGCTGAGAGTGGACCGCACTTTTGTGAGGAATTCCTCCCAAACCTTCTCAGTCTTTTATCAGACAAAGTGCCCAATGTCCGGCTGGCCGTGGCCCGGACACTAACCCACAGCGTGCTGAACTGTGATTACCTTCAGAATCCGGAATGTAAAGAAAGGGACATCGTAACTGGCGCACTGCGCAAGCTCCAGTCTGACTCTGACAGGGATGTCCGCTACTTTGCTGGCAGCAAAGAGGACTGGGACGAGAATCGGGAATACTCTACACAGGGTGCCCACAACAGTAGTGTCGGAAGGGAGTGTCGGAAGGAAGGTTCTGGGGAGAGCGGTGATAATACAGAGCAAGTCGACATGGAGGAGGAGGGGATTGATACTCTACAGACAAGCCAACAAATAGCGCACCTTGAGAATCAGATAGCCGAGGAGCTTAGCAAGGAATTCCAGGACAATTCCAATATGGAGTTAGAGAAAGTAAGCTCAGGTCATATTAGTATAGTTGGTGACGAGGTATCTAGCTCAACTCAAGAGGTCTGTGAAGAGAAACCAAGGGAGGATGGGGAAGCAAAGAAAGAGAGTGTCGAGATGGTGGCCAAGAAAGGGGACATGGTGCCGGACACCGCCCAGGACACACTGGAAACTGGACTTGACAAAGCAGAGGCTTGCACTTGACGAGGGCTGATTTATTCTACTTTTACAAAATAGAGGTTAGGTCCCCGTCATTCCAAGAACCATTCATAGAATTCGGAGAATTATCCAGACCATGCTGTGAATAGCATGGTAGGCGTATACAAGAATTACAGACCTGTAAAGACACGACGAAATAGCTAAGCATTTTACATGGATGTGCGGGGCCATGGGAATTTGTGTACTCCCTTGTGCTTTGCCTTTATCTATTAGTTAGGCAAAGTTTGCTTATAAGATTCAGTCAGATAATTATTTTACTTTCCCGACTAATTTCCAAACAGGTGGTGGATTTAGAACCACCCCCacacctaaaaaaaacataggcaCTAAATTCCATGAATATAATTCCGTGACATTTGTTTTataatcccccctcccctcccaatAAATTCTGGGTTCGCCACTGCAATTCCCCTCCCAATAAAATGGGATAGTAATCGGTCAGtcatggaaaaaaaacaataacaggaTTATGCCTGTCATGTTTGGGCCTGTGATCCtacatattttgtttgattccTTGGTAGGCATTTTAGTTGGCATTTAAAGGAAAATCAGTGTACGATATTGGTTTAGAAACAGTTATATAAGCGAAGGAAATCCAACACAATTGTACATTGTCCCATGAAATTGCATATTTTGCCGGGCTTATTGATAGGGGGAAATTCCAGTTCATGCAAATAGTTTTGTTATATAAATACCTCAGTATTTATCTAAACAATAGAATTTTGAATACAGATGATAAATCTATACCTAATTTTGATTAAATTTGGATTATATTTATGAAGTAGTAGAATGGATGTTATGAGCCAAGTTTGGGGGTGTGGGGTATTCTACTCGTCTCATAAGATCTAGAATGACCCTCTGTAGGATCTGCATATTGGCCAGGTCATGCTGGCAGCAATTGGCACCAACAATTCCACTCATTTTTAAGCAGATCAGGTAATGATTCTCTCAACCGTGATACTCATGCTTCTATAGGTTAGAATTTAACAAGGGATCAAATCGTAATTGCAATGATATAATTTTGCACATTGTTATCACTTTGTGATCCTTGGACAATGAGTGAAATGGTTAACTTAGTTGTACGTGTTGTAAGCCTCAAGTAAGCCTAAAATTATTCGTCTGAGATCAATGCTCAGACATTTTTGTTGTCATTTTATATAGGATCTGTGGGTGGGTAATTTCCACTTCTGTGACTGTTCTATAGTAAATAATGTCGTATGACATAAATGTGTGAATAAATGATCTAATTTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8TF05	Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Homo sapiens OX=9606 GN=PPP4R1 PE=1 SV=1
Q8VI02	Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Ppp4r1 PE=1 SV=1
Q8K2V1	Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004073 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02985 all species →	HEAT	HEAT repeat	Repeat	Interproscan
PF15017 all species →	WRNPLPNID	Putative WW-binding domain and destruction box	Disordered	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR000357 all species →	Repeat	HEAT repeat	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR051023 all species →	Family	Protein Phosphatase 2A Regulatory Subunit A	Interproscan
IPR033461 all species →	Domain	Putative WW-binding domain and destruction box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10648 all species →	SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0019888 all species →	Molecular Function	protein phosphatase regulator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15424	PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032233174.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

23.8Max TPM

11.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	13.22	17.38
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	8.98	13.00
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	8.55	9.53
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	17.06	21.08
whole 6 week old aboral regenerate · regenerate uncut	3	3	8.94	9.95
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	17.18	21.96
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	12.22	14.34
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	15.50	18.91
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	10.42	17.20
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	10.12	15.31
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	12.97	15.30
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	16.35	23.78
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	13.77	16.04
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	11.18	17.23
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	7.90	12.61
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	5.01	15.03

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	17.38
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	13.77
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.53
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	13.00
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.85
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.09
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.53
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.12
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.01
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	21.08
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	16.91
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	13.20
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	9.95
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	9.70
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.18
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	21.96
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	15.03
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	14.55
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	14.34
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.91
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	10.40
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	18.91
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	16.01
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	11.60
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	17.20
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	14.07
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	15.31
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	15.04
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	15.30
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	12.75
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	10.85
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	23.78
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	12.94
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	12.32
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	16.04
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	12.83
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	12.46
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	17.23
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	16.32
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	12.61
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.10
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	15.03
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.