Gene detail

Detailed information of XP_032233497.2 in Nematostella vectensis

Genomic Location: NC_064035.1:17761241...17770945
NR annotation: XP_032233497.2, pleckstrin homology domain-containing family A member 8 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_032377606.2

CTTAGTTCtcgtgttgttttttttaaagtcgaAAATTTCCAATGATTTCAGAACCAAACGCTCAACCTTCTAAAGAGTCGAATGGCACCCTGTGAAGGTTGAGTGGTTTTTTAAGTAATTAATTTATAGTTGTGTGTTTCTCATTAAGCAGGACATGTCTTTTTTCTCTCGCCTCCTCAGTCTTACTCTTTGGCCTGAAGAAATGCCCTTTGGCTATATTTCCATTTTGTCGTACCCCTCCCTGCCTTTTCGAACGCCATTTGTCGATTACCCAAAGCCCTCTGCgaacaatattgtctacgcaaGATGGCTGCCACTTTGACAAAAAATCCGTACTATAATCTTGGCTAAGCTGGAACAACTGCAGCTATGCGTGAATGCGGAACAGCTGCGGGTTTGAGTGAGATTCATTTGATCTTGTCAGGGGTATAAAACCGCAAAACCTTCGTCCCAGCATGGCTTTGATGGAGGGCACGTTATGGAAGTGGACGAACTATCTAAGTGGTTGGCAGCCCCGATATTTTGTTCTGGAAGTTGGAGTTCTTTCTTATTACAAATCCCAAGAAGAAGTTGGTCTTGGAAGTCGGGGTTCCATAAAGATGAGTTGCTGTGAGATTTCTGTTCACCCTACTGATACAGTCAGAATAGACTTGAGGATCCCGCCAGAACAATACATATACCTACGTGCAGCTACTCCTGCAGAGAGACAACAATGGGTGGTTGCCATGGGAACCGCTAAAGCCTGCATAACACAATGCCCATCTCCAAATGACAAAAAGCCACTACAAACTTCAAAAACATCACAGCTGAAAGAGAAGATGGAAGAACTGAGCATGTATAGAAGTCTACTGTTACAGCAAATAAGCACAATCAAGCTTATGTGCACAGAGAAAGACGACAACCAGGAATTCAATGAGGCAGCCACCATGCTTTCGGCCACATGTGATGAGTTCTTGAAGAATCTGTGTGACTGTATGGAAATCGCTGATAATAGTTTTTTGGGCTCCCCCCCTGGTTCCCCTACTCCGCAGAGCTCTGAGCATGCAGCACTCCGGAAGCACCTTCTTCGGGACTCGCACAGAACCCCACCTTTGTCACCCACTTCCAGTGTTGCAAGCTCTTCTGTTGGATCAAGTGCAAGCGCTTCTTCCTCTGGCGAGAAAGCTTCACCTTCACGCCCATCACCGCCAAGACACAGCATGCAAGCACCAGCACCGAGAAACACTGAAAGTAGAACACCAAGAACAACAAACGTTGCAACAGGAAAACCTAGAATACCAACACCTAGtagctctgctagcagagacGGTGCTAGTGAGCCTGCCAAGACCTCAGATTTAATTTCCACACCACGACATGCAGAACCTGAGCAGCCCAAGGAGCCTGACCACATCACATTCTTTTCATCAACACAGCACAAATTTGAAGATGTGATAGTTACACCAGATGGCGGTATCCCCACAAAGTCATTCCTGGCTGCATGCACATGCATTCTTCCTTTCTTTGACGTGATGGGTTCTACAGCATTTGCTCCTGTCAAGATGGATATCGGGGGCAATATACGGAAAATATCAAGTAAATTCGACACCGATCCAAAAGCATTCTACACTCTTCAAAATATCGTTTACCAAGAACTAAAGAGCAACACTTGTACTGCCAAGAACTCTGCGACGGATGCGCTGCTCTGGTTAAAAAGGGCTCTAGAATTCATGCAGATCTTCTTGGCCGAGGTGGTTAAGGGCAGACAAGACCTAGCTGTGGCCGCGGGAATTGCATACGAAAAGACGCTGCGAAAATACCACGGCTGGGTCGTACGAGGCGTGTTCGCTCTGGCGGTTAAGGCCGTGCCTTACAGAGAGGACTTCCTCACTACGCTCGGCACGACAGAGACAGGCCTGGCGCCTAGTCACGTGGTGCTGAGTGACATGAAGAGTTGTGTGACGGCGCTGGGCGCTCTCACCCAGAACTTGAATCTGTTTTACATAAGCAACAAACTCGACTCAGATCTCACTGTCTAGACTTCACTAAGGCCTGTAATAGTCCTTCTTGCCTCATGCTTTTACGGATCCCTCCGATCCCACGTCACCAAATACTACTGAGAATTTGTGTCTCCCAAAGACGCTAAACTACATGAGAACAGACACTGTCATGGTTTGAGAAATGGTGCAAACTAGTTAGACTTGCATATTTTAATtcaattaaattaaattaataaCAATTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5U3N0	Pleckstrin homology domain-containing family A member 8 OS=Danio rerio OX=7955 GN=plekha8 PE=2 SV=1
D3ZY60	Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=10116 GN=Plekha8 PE=1 SV=1
Q80W71	Pleckstrin homology domain-containing family A member 8 OS=Mus musculus OX=10090 GN=Plekha8 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001900 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08718 all species →	GLTP	Glycolipid transfer protein (GLTP)	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036497 all species →	Homologous_superfamily	Glycolipid transfer protein superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR014830 all species →	Domain	Glycolipid transfer protein domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10219 all species →	GLYCOLIPID TRANSFER PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0120009 all species →	Biological Process	intermembrane lipid transfer	Interproscan
GO:0120013 all species →	Molecular Function	lipid transfer activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08051	PLEKHA8, FAPP2; pleckstrin homology domain containing family A member 8	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.