Genomic Location: NC_064042.1:1131847...1144853
NR annotation: XP_032234284.2, ectodysplasin-A isoform X1 [Nematostella vectensis]
| CDS | ||||
| LOC5509486 | ||||
| Transcript |
| rna-XM_032378393.2 |
| Protein |
| XP_032234284.2 |
| Uniprot term | Description |
|---|---|
| P09225 | Lymphotoxin-alpha OS=Mus musculus OX=10090 GN=Lta PE=2 SV=1 |
| Q9XT48 | Lymphotoxin-alpha OS=Notamacropus eugenii OX=9315 GN=LTA PE=2 SV=1 |
| Q06332 | Lymphotoxin-alpha OS=Rattus norvegicus OX=10116 GN=Lta PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00229 | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11471 | TUMOR NECROSIS FACTOR FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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