Gene detail

Detailed information of XP_032234471.2 in Nematostella vectensis

Genomic Location: NC_064045.1:4477241...4492455
NR annotation: XP_032234471.2, trinucleotide repeat-containing gene 6A protein isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5509622

ATGCCAAAGGATGATAAAAAGGAGTTCTTAAAGTCACTAGGAGTGGACACTTTATCGTCAGAAAATGATATAAAAAGAGCGTACAAGAAAATTGCTCTACAATGCCATCCAGATAAGAATCCTAGCGATACTTCGGCGCGAAAACAGTTCGAAGAAGTCAGTAAAGCATTCGAATACTTAGTCCATGATGGAATCAATGATAGTTTGAAAGACTATGACAAGGTTTTCTTCGACTTTCTTAGAGACATCTTATTCGGTTCAGATGGAGCAAGTGATTTCTTTACTTATTTCTGTGGCTCAAAGCAACATTCTTGTATATCTACGGATACAGACCCAGATTTCAGATATCAAGATGACGATGAAGAGGAAGATATTGATGGAGAGCAAGAGCTTGAGAGTTTACTGGAAATTGTTAAGAACCGAAGAAAAAGAGGGAAGCCTGTTCCTGATGAGTTTCATGAAGAAAAACTGCAGGAACTTAAAACTAGGCTTTCACAGCATAAAGAGGATATGAAAAAGGATGGGTCGAAAAAGCAGGCTGTGAAGAAAGGAAAAGCTGTATCTGTACCAGTAGCTAAGCCTAAACCTAAGAGCAAAAAACAACTATTGGCTGAACAGCGAAGAAGGGCTAAGGAAATGGAGCAGATTGCTATGGAACTTGAAGAGAAAAGAAAAGAAGAAGAGGAAAAAGAGAAGCAAAGAAAACAGCTGGAGGTTGAAAAACAGAAGAGATTGGAAGAGGAAAGAATCAGATCACAGAATGAGGAACGTAAACGAAGGGAAAGAGAGCAAAAGGAGCGAGAAAAACAACAAAAGCTGGATATGGAAAAAGAGGAGCGTCGTCGGAGACAGCAGGAAGAAGAAAAGAAACGAAGGGAAGAGGAGGAGAAGCGCAAGAAAGTGGAAAAAGAAAAACAGGAGCGAGAGAAGGCGGCAAAGAAGGCTGCTTTGCAAGCTGCTAAAGAAAAAGAGGAGCAAGCAAAAGCGGCTTCTAAAAACCAGAATATTAAGAGACAGCAGCAGCAACAAAGGACAGATCAACAACAGTACCCTCGTGAAATCCCTCCTCGCTTTCAAAAGATGAAGAGACAGCAACAACAACAGCAACTTCAGACACCCAACCTCCCCCCTCCTGCACCTACAGGTTCTCCTGCACAGCTAAACAAATTCCAGTCAAAACCTCAACAGCAACCAGTTGGGAAGAAAAAAGACCCGAATCGATTTGCATCCAAGGAATATGCTGATCTAGTTGATGAAGTTGACGATGCTGGATGGAATAAGGGTTCCCAATGCAAAGGGAGTGGATGGGAGGGTACATCTGAAGACTGGGAGGAAAATATCGCTGAGAAATGGGGAGCTGACAGACAGTGGGGCAGCAAAGAAGGCAGCTCCAACCAACTTGTTGTGGACAGGACTGACGGTGACTCTTGGCCGACTGTCGGCAGCAAGAGCGCCATTGGCGATAAACCTAACTCTTCGTTGGAAAATAGCAATTCTAAGAACTCTTCTGAAACTGTACCTGTTGGGACTATAGGTAGCAAACCTCCATCTTCTAACTGGAATAGTAACCGCAATTCAGGAGGATTACCTTTGTCTGAAAACTGGGACACTACTTGTGATGAGTCAATTGACCGTGCATTAGATGCCACTGAGTCTAAAGGAAGTGTTGGACCAGGGGGAGTAAACTGGGTTGGAATGGGGACGGGAGGGCTAGGTGGGATTATTGGTACACCGCTAGGCTGGGAACCGTCCAAAGAGAATCGTGACATAGACAAAACAGCTTCTAAATCGGGATGGTGTGGTGAGCAAAACTCCACTGTTGACTCTTGGAATAAAACACCCGGAAAAGGACCTAAAACACAAGTATTTGGAGGTTCTGCCCCCACCTGGGGCGGCACTCCCGCGGACTCTAGCTCTGCGTGGGTAGAGACATCTGGTACTGAGACTAATAAACCTAACTCTTCCGGTTGGAATTCTAAAGTCAGTTCAGGCTTATCTCAAGGGAACTCTTCCAGTATGGCTTCTGTGGACTCTACTGATAACAAACCTACCGATAACAAACCTGCCCCTTCCGGGTGGGGTGAGGCAGGGCCTAGTTGGGCTGTGCCAGCGAGTGTTACTGGTACTGCATGTTGGGATACTGCGACCACTACGTCTCCGAAGAAACCATTAGATTCTAAAGACTCTAAGCTTAGTCATGATAAGGTTTCGGGATGGCTAGAGACATCTGTCACGTCAACGTCCGTTACTGCAGACTGGAATGGGGATAGTAATGCGGACCAGGAGGATTATTATGAGGAGGCTTGGGACGGATGGACAACAGCCTCGTCTAAGCGCAATAAGGCACCTAAGCCCGCCCCCACTAACGACAGTAATGCCTGGATGAGCAGGTCACTAAAGCAACTGCTGGACATGGGATTTAAGCAAGAGGATGCTGAGAAGGCGCTGCGTGCTAATCACATGAATATAGAGAGTGCAATAAGTGACTTGTTGTCTCTGACTGCTAGTCAAATCGAGGAAGCAAGTCGGGCATCATCAGCAAACACAGGTGAACCAGATCCTGCCGAGGCATGCCGCATGCAACAACAGAACACTTCTACTAGCAAACCGAACCGCAAACAGCGACGCAAGACACAGCAACAACTCCAACAGCAACAAGCAAAACAGGAAAGCAAACAAACAGATATTTATGATGCTAATAGTCAGTCTGGGTCTAGTGATTCTACCGTCAAGGACCCTAAAAGCGAATCAAATAAAGACGAGAAAGGCCAGGCAGCTGAAGGACAATCAAATAAGCCATCTAACCAAGGAGCATCTGATGGTAAAGGGAACGCTTCTAAGACTACTGAGAATTCCCCACATCTCTCTCCTGGAAAATCTAATGCAGGCCAGAAAAGAGCCACCACTGGATTAATACAGACCCCGGCACTGGGCACGCCAACTCCTATGCGTACACCCATGACACATCCTCTTCTGCACCAACAGTTTCTGCATCAGGTTCAGTTGCATCAGTTGCGGATGGCTCAAGGGGGGCTCCTCCAGCCACCGATCAACCCACAGCAGGTGGCCTTGTTGCAGCAGATGGCACAGCTCCAGATGGTCCAGCACCGGATAGCGCAACAGCAACTGACGCAGAAGCACAATATACAAGCCCAGCAGCAACTTTACCAGCAACAGCAGCAGATCGCCTTGATGATGGCTCAACTGCAGCAGCAGGTGATGCAACAGCATAACCACCAGATGGCTGGCAACCGCTTCCCCTCTCCAGGCTTCCAGCAGTCTACTCTTCCGCCACAGTCTTCGTCAGCTCAGCCAGGAACGCCACCTCAGAACGCAAAGAACTCAACAAAAGCACCATCGACAGAACCCTCTCAGAGTAAACCAGAGGAGCCCCCTAAAGCGTCCACTGCAGACAAGCCTGTTACGACTGTTGCATCAGGCGAACGTATTACCCAACAGTCGCCTGCACCACAGTCACGCCTTACTCAGTGGAAGCAGCCGCTCTTGCCAGACCCAGAGACATCGCATGGAGAGACATGGGGAATGCCAAAGATTGAGCAAATGAGTCTTTTATCTGGGCCAGTTGTGTCATCCTCCCTTGAACAGCAACACGGTGCACCCAATTTGTCGCCGCAGGCAAACAGGATTGCAGACCCTGTGTCAAGCAGATGGGGGGTCGATGCGTCCTTGAAGCTCTCTGCTGATCCTCCTGAGTTCAAGCCAGGCGTCCCATGGCGTCCGCGTGGAGAAGGAGAGGAAAAGAGTGGGAGTAGCGGATCAAGCATGGAATCCTCACCCCAAGGAATGCCTGCTTCTGGGAAAACTCAAATAACAGATAATCCAAACAAGCAACCAGGTTTCCCAGGGGGGTTCTCCTCAGCGTCTCAATTCCCTTACAGCATTGCATCTTCCCCTTGGCAAAACACTGAGCCAACGGACTCCTTAAACAAAACCCAAGCAAACCCTTCGTCTATTCGCCCTCCCCCTGGACTGAACACCTCTACTTCAAGTGGTCTTCCCGACACTCCGAGCATCGAGGAGCGGCCAGCGTGGATGAAGAACTTGATGGACGGTGGTACACAGCAGTCTTTTGCTCAGGGCCCTAATCCAGGGAACTTTCAGTTAGGATTAAGATTGGGCTTCTCCGCATCTGGAAACTCATGGAGTACACAAGATGGGATGTCTGTTAGTGGGTTGACGCCCAACTCTCAACCATGGGCCGCACCAGGTGGTCCATCATCCTCGTCTACACCATCATCCGACCCAAGTGCTGAGGCAGCTTCTAGTACTGCTAATGCTGTAACCTCGGCGGAGCAACTCAAGCCGCAAGATGAGGGAATCAGCTCATGGTCCACTAACCAGCCCATTCCATCCGCTGAGGAGAAGCAGCAACAACCACCTGTAGCCCAAGGGCCCAGGATGGGGTCAGGAAGGGGTGGGGCTAACCCCATGTCTACCTGGCTTGTACTAAGGAACTTGTCACCAAGGGCTGATCCTACCGCTATGCGTGCTGTATGCCAGCAGTATGGCCCCCTACTGACCTTCACCCTCAACTTAAGACACGGCAACAGCCTGATACGCTACAGCAACAAGGACCAGGCGGCAAGCGCGCGCAACAACCTTAACGGCATGATGGTCAAGGGCATGCAACTCATCGCAGACTTCGCCACAGACAGCGACATTGGGGGCTTCTTCGAGCAGACTCCTGACTGGAGTAACAACCCCATGCCACCCAACCCATCCTTCGGGAACCCCTGGTCTTTCGGCACTGTCGACCCAAATCGCCCACTTGGATCAACCCAGGGGCTTGAGAAGACACCCCAGGGCCCACCCCCTCAAATGCCAGCTATGGTCCCTCCTGGAATGCAGTGGGGCTCCTCTAGCCAGCTTCCGGCACAGCTGTGGGGGAACTCCCATCCTGGGGCTGCTACAGGTTTCCCTTCGCAGGTGCCTAGCATGTGGTCGTTCTCGGGTGGGGCTCCTCGCGATGTTGAGCCGCAGTCGGGGACAAACGAGAATGGACTTGTTAGCCCTTCCATGACCACTTTTCTGCCTCCTGGTTTATTGAACGGCGGAGAGTCTGTGTGA

Transcript

rna-XM_032378580.2

TCGCGCCCTTTTTCAAAAGTTCAATAGAATCGGCCGCATTGCGTAGTGGGAAGGCCTTGTGTAGACACGTGACGTCATATCTTCCATGTCCGCCATATTGATTTGGAAGCGCTTGGGGACTCCATGTAACGTAAATCCTAAGTTTGGATAAAGATTTTCGTATCTATATGAGGTGCACGGCTAAAAAATGCCAAAGGATGATAAAAAGGAGTTCTTAAAGTCACTAGGAGTGGACACTTTATCGTCAGAAAATGATATAAAAAGAGCGTACAAGAAAATTGCTCTACAATGCCATCCAGATAAGaaTCCTAGCGATACTTCGGCGCGAAAACAGTTCGAAGAAGTCAGTAAAGCATTCGAATACTTAGTCCATGaTGGAATCAATGATAGTTTGAAAGACTATGACAAGgttttcTTCGACTTTCTTAGAGACATCTTATTCGGTTCAGATGGAGCAAGTGATTTCTTTACTTATTTCTGTGGCTCAAAGCAACATTCTTGTATATCTACGGATACAGACCCAGATTTCAGATATCAAGATGACGATGAAGAGGAAGATATTGATGGAGAGCAAGAGCTTGAGAGTTTACTGGAAATTGTTAAGaaccgAAGAAAAAGAGGGAAGCCTGTTCCTGATGAGTTTCATGaagaaaaaCTGCAGGAACTTAAAACTAGGCTTTCACAGCATAAAGAGGATATGAAAAAGGATGGGTCGAAAAAGCAGGCTGTGAAGAAAGGAAAAGCTGTATCTGTACCAGTAGCTAAGCCTAAACCTAAGAGCAAAAAACAACTATTGGCTGAACAGCGAAGAAGGGCTAAGGAAATGGAGCAGATTGCTATGGAACttgaagagaaaagaaaagaagaagaggaaaaagAGAAGCAAAGAAAACAGCTGGAGGTTGAAAAACAGAAGAGATTGGAAGAGGAAAGAATCAGATCACAGAATGAGGAACGTAAACGAAGGGAAAGAGAGCAAAAGGAGcgagaaaaacaacaaaagctgGATATGGAAAAAGAGGAGCGTCGTCGGAGACAGcaggaagaagaaaagaaacgAAGGGAAGAGGAGGAGAAGCGCAAGAAagtggaaaaagaaaaacaggaGCGAGAGAAGGCGGCAAAGAAGgCTGCTTTGCAAGCTGCTAAAGAAAAAGAGGAGCAAGCAAAAGCGGCTTCTAAAAACCAGAATATTAAGagacagcagcagcaacaaagGACAGATCAACAACAGTACCCTCGTGAAATCCCTCCTCGCTTTCAAAAGATGAAGagacagcaacaacaacagcaacttCAGACACCCAACCTCCCCCCTCCTGCACCTACAGGTTCTCCTGCACAGCTAAACAAATTCCAGTCAAAACCTCAACAGCAACCAGtTGGGAAGAAAAAAGACCCGAATCGATTTGCATCCAAGGAATATGCTGATCTAGTTGATGAAGTTGACGATGCTGGATGGAATAAGGGTTCCCAATGCAAAGGGAGTGGATGGGAGGGTACATCTGAAGACTGGGAGGAAAATATCGCTGAGAAATGGGGAGCTGACAGACAGTGGGGCAGCAAAGAAGGCAGCTCCAACCAACTTGTTGTGGACAGGACTGACGGTGACTCTTGGCCGACTGTCGGCAGCAAGAGCGCCATTGGCGATAAACCTAACTCTTCGTTGGAAAATAGCAATTCTAAGAACTCTTCTGAAACTGTACCTGTTGGGACTATAGGTAGCAAACCTCCATCTTCTAACTGGAATAGTAACCGCAATTCAGGAGGATTACCTTTGTCTGAAAACTGGGACACTACTTGTGATGAGTCAATTGACCGTGCATTAGATGCCACTGAGTCTAAAGGAAGTGTTGGACCAGGGGGAGTAAACTGGGTTGGAATGGGGACGGGAGGGCTAGGTGGGATTATTGGTACACCGCTAGGCTGGGAACCGTCCAAAGAGAATCGTGACATAGACAAAACAGCTTCTAAATCGGGATGGTGTGGTGAGCAAAACTCCACTGTTGACTCTTGGAATAAAACACCCGGAAAAGGACCTAAAACACAAGTATTTGGAGGTTCTGCCCCCACCTGGGGCGGCACTCCCGCGGACTCTAGCTCTGCGTGGGTAGAGACATCTGGTACTGAGACTAATAAACCTAACTCTTCCGGTTGGAATTCTAAAGTCAGTTCAGGCTTATCTCAAGGGAACTCTTCCAGTATGGCTTCTGTGGACTCTACTGATAACAAACCTACCGATAACAAACCTGCCCCTTCCGGGTGGGGTGAGGCAGGGCCTAGTTGGGCTGTGCCAGCGAGTGTTACTGGTACTGCATGTTGGGATACTGCGACCACTACGTCTCCGAAGAAACCATTAGATTCTAAAGACTCTAAGCTTAGTCATGATAAGGTTTCGGGATGGCTAGAGACATCTGTCACGTCAACGTCCGTTACTGCAGACTGGAATGGGGATAGTAATGCGGACCAGGAGGATTATTATGAGGAGGCTTGGGACGGATGGACAACAGCCTCGTCTAAGCGCAATAAGGCACCTAAGCCCGCCCCCACTAACGACAGTAATGCCTGGATGAGCAGGTCACTAAAGCAACTGCTGGACATGGGATTTAAGCAAGAGGATGCTGAGAAGGCGCTGCGTGCTAATCACATGAATATAGAGAGTGCAATAAGTGACTTGTTGTCTCTGACTGCTAGTCAAATCGAGGAAGCAAGTCGGGCATCATCAGCAAACACAGGTGAACCAGATCCTGCCGAGGCATGCCGCATGCAACAACAGAACACTTCTACTAGCAAACCGAACCGCAAACAGCGACGCAAGACACAGCAACAACTCCAACAGCAACAAGCAAAACAggaaagcaaacaaacagatATTTATGATGCTAATAGTCAGTCTGGGTCTAGTGATTCTACCGTCAAGGACCCTAAAAGCGAATCAAATAAAGACGAGAAAGGCCAGGCAGCTGAAGGACAATCAAATAAGCCATCTAACCAAGGAGCATCTGATGGTAAAGGGAACGCTTCTAAGACTACTGAGAATTCCCCACATCTCTCTCCTGGAAAATCTAATGCAGGCCAGAAAAGAGCCACCACTGGATTAATACAGACCCCGGCACTGGGCACGCCAACTCCTATGCGTACACCCATGACACATCCTCTTCTGCACCAACAGTTTCTGCATCAGGTTCAGTTGCATCAGTTGCGGATGGCTCAAGGGGGGCTCCTCCAGCCACCGATCAACCCACAGCAGGTGGCCTTGTTGCAGCAGATGGCACAGCTCCAGATGGTCCAGCACCGGATAGCGCAACAGCAACTGACGCAGAAGCACAATATACAAGCCCAGCAGCAACTTTACCAGCAACAGCAGCAGATCGCCTTGATGATGGCTCAACTGCAGCAGCAGGTGATGCAACAGCATAACCACCAGATGGCTGGCAACCGCTTCCCCTCTCCAGGCTTCCAGCAGTCTACTCTTCCGCCACAGTCTTCGTCAGCTCAGCCAGGAACGCCACCTCAGAACGCAAAGAACTCAACAAAAGCACCATCGACAGAACCCTCTCAGAGTAAACCAGAGGAGCCCCCTAAAGCGTCCACTGCAGACAAGCCTGTTACGACTGTTGCATCAGGCGAACGTATTACCCAACAGTCGCCTGCACCACAGTCACGCCTTACTCAGTGGAAGCAGCCGCTCTTGCCAGACCCAGAGACATCGCATGGAGAGACATGGGGAATGCCAAAGATTGAGCAAATGAGTCTTTTATCTGGGCCAGTTGTGTCATCCTCCCTTGAACAGCAACACGGTGCACCCAATTTGTCGCCGCAGGCAAACAGGATTGCAGACCCTGTGTCAAGCAGATGGGGGGTCGATGCGTCCTTGAAGCTCTCTGCTGATCCTCCTGAGTTCAAGCCAGGCGTCCCATGGCGTCCGCGTGGAGAAGGAGAGGAAAAGAGTGGGAGTAGCGGATCAAGCATGGAATCCTCACCCCAAGGAATGCCTGCTTCTGGGAAAACTCAAATAACAGATAATCCAAACAAGCAACCAGGTTTCCCAGGGGGGTTCTCCTCAGCGTCTCAATTCCCTTACAGCATTGCATCTTCCCCTTGGCAAAACACTGAGCCAACGGACTCCTTAAACAAAACCCAAGCAAACCCTTCGTCTATTCGCCCTCCCCCTGGACTGAACACCTCTACTTCAAGTGGTCTTCCCGACACTCCGAGCATCGAGGAGCGGCCAGCGTGGATGAAGAACTTGATGGACGGTGGTACACAGCAGTCTTTTGCTCAGGGCCCTAATCCAGGGAACTTTCAGTTAGGATTAAGATTGGGCTTCTCCGCATCTGGAAACTCATGGAGTACACAAGATGGGATGTCTGTTAGTGGGTTGACGCCCAACTCTCAACCATGGGCCGCACCAGGTGGTCCATCATCCTCGTCTACACCATCATCCGACCCAAGTGCTGAGGCAGCTTCTAGTACTGCTAATGCTGTAACCTCGGCGGAGCAACTCAAGCCGCAAGATGAGGGAATCAGCTCATGGTCCACTAACCAGCCCATTCCATCCGCTGAGGAGAAGCAGCAACAACCACCTGTAGCCCAAGGGCCCAGGATGGGGTCAGGAAGGGGTGGGGCTAACCCCATGTCTACCTGGCTTGTACTAAGGAACTTGTCACCAAGGGCTGATCCTACCGCTATGCGTGCTGTATGCCAGCAGTATGGCCCCCTACTGACCTTCACCCTCAACTTAAGACACGGCAACAGCCTGATACGCTACAGCAACAAGGACCAGGCGGCAAGCGCGCGCAACAACCTTAACGGCATGATGGTCAAGGGCATGCAACTCATCGCAGACTTCGCCACAGACAGCGACATTGGGGGCTTCTTCGAGCAGACTCCTGACTGGAGTAACAACCCCATGCCACCCAACCCATCCTTCGGGAACCCCTGGTCTTTCGGCACTGTCGACCCAAATCGCCCACTTGGATCAACCCAGGGGCTTGAGAAGACACCCCAGGGCCCACCCCCTCAAATGCCAGCTATGGTCCCTCCTGGAATGCAGTGGGGCTCCTCTAGCCAGCTTCCGGCACAGCTGTGGGGGAACTCCCATCCTGGGGCTGCTACAGGTTTCCCTTCGCAGGTGCCTAGCATGTGGTCGTTCTCGGGTGGGGCTCCTCGCGATGTTGAGCCGCAGTCGGGGACAAACGAGAATGGACTTGTTAGCCCTTCCATGACCACTTTTCTGCCTCCTGGTTTATTGAACGGCGGAGAGTCTGTGTGAACCAAGCTCAACGCCAAGGTTTGCTTGGACATGGACTAAAACGCGTGTGAATCGGGCTTTGTGGTGCCACAAGTCTGGTATAAACGCAACGTATCAAGCATTCGCTAACGGACTGAAATAAAATGTGTCTGTGTTTGTTCGTGTGTTGTTACTCCGCTTTGTCCAGCCCTGGAATATGGGTATTGGCCATGAGCGGTGTGTGTTTGTATGGGTGTACTATGTTTAGCACTGATTAAAATATCGTTCTACA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UHK8	Trinucleotide repeat-containing gene 6A protein OS=Mus musculus OX=10090 GN=Tnrc6a PE=1 SV=2
Q8NDV7	Trinucleotide repeat-containing gene 6A protein OS=Homo sapiens OX=9606 GN=TNRC6A PE=1 SV=2
Q3AQP5	Chaperone protein DnaJ OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=dnaJ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008140 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|UBA · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR052068 all species →	Family	GW182 domain-containing protein	Interproscan
IPR041917 all species →	Domain	Trinucleotide repeat-containing gene 6C protein, UBA domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13020 all species →	TRINUCLEOTIDE REPEAT-CONTAINING GENE 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000932 all species →	Cellular Component	P-body	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0035195 all species →	Biological Process	miRNA-mediated post-transcriptional gene silencing	Interproscan
GO:0060213 all species →	Biological Process	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032234471.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032234471.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

45TPM > 0

16Conditions

25.8Max TPM

16.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	19.67	24.74
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	14.64	19.47
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	13.04	14.15
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	19.36	22.01
whole 6 week old aboral regenerate · regenerate uncut	3	3	13.43	15.50
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	13.88	21.56
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	18.26	20.25
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	18.79	19.72
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	16.56	21.43
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	20.82	22.28
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	17.35	19.98
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	21.65	25.80
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	17.15	20.67
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	12.84	23.17
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	16.13	16.70
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	10.80	20.75

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	24.74
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	20.56
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	13.71
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	19.47
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	13.12
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.33
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	14.15
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	13.23
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	11.74
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	22.01
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	20.10
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	15.97
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	15.50
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.11
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	10.67
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	21.56
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	20.09
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	20.25
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	18.09
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	16.44
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	19.72
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	19.64
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	17.00
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	21.43
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	16.97
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	11.28
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	22.28
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	20.87
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	19.32
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	19.98
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	16.08
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	15.98
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	25.80
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	19.71
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	19.44
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	20.67
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	17.74
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	13.04
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	23.17
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	15.34
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	16.70
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	16.10
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	15.59
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	20.75
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	11.66
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.